Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p51700 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-57 225.7 108 100.0
BolC3t17455H Brassica oleracea HOM05D000209 ORTHO05D000129 3.9e-46 188.0 175 59.4
BcaC01g03505 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-43 178.7 87 96.6
BraA03t13377Z Brassica rapa HOM05D000209 ORTHO05D000129 4.5e-42 174.5 87 92.0
A03p42240 Brassica napus HOM05D000209 ORTHO05D000129 7.1e-40 167.2 85 90.6
AT3G21410 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.8e-25 118.2 87 66.7
AL3G35490 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.0e-25 117.9 86 68.6
Carub.0003s2144 Capsella rubella HOM05D000209 ORTHO05D000129 3.3e-21 105.1 89 60.7
CARHR097380 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.8e-20 102.1 89 59.6
CARHR238210 Cardamine hirsuta HOM05D000209 ORTHO05D000129 9.1e-19 97.1 87 51.7
Carub.0003s2280 Capsella rubella HOM05D000209 ORTHO05D000129 2.9e-17 92.0 89 48.3
CARHR098530 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.2e-16 88.6 87 49.4
A03p42860 Brassica napus HOM05D000209 ORTHO05D000129 9.4e-16 87.0 87 46.0
AT3G22650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.6e-15 86.3 84 51.2
Thhalv10022403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.6e-15 86.3 87 48.3
Sp3g20410 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.6e-15 86.3 87 49.4
BcaC01g03433 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-15 85.9 87 44.8
C03p52640 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-15 85.9 87 44.8
BolC3t17532H Brassica oleracea HOM05D000209 ORTHO05D000129 2.1e-15 85.9 87 44.8
BraA03t13432Z Brassica rapa HOM05D000209 ORTHO05D000129 2.1e-15 85.9 87 44.8
Aa31LG8G9200 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.8e-14 82.8 90 48.9
Aa31LG8G9180 Aethionema arabicum HOM05D000209 ORTHO05D000129 3.0e-14 82.0 89 48.3
Aa31LG8G9160 Aethionema arabicum HOM05D000209 ORTHO05D000129 2.0e-13 79.3 89 47.2
Aa31LG8G9220 Aethionema arabicum HOM05D000209 ORTHO05D000129 2.0e-13 79.3 88 46.6
AT3G17490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.3e-13 78.6 93 47.3
Aa31LG8G9170 Aethionema arabicum HOM05D000209 ORTHO05D000129 7.4e-13 77.4 89 48.3
Aa31LG8G9190 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.3e-12 76.6 89 44.9
BcaB04g19209 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-12 75.5 78 47.4
CARHR044120 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.8e-12 75.5 99 48.5
Aa31LG5G23400 Aethionema arabicum HOM05D000209 ORTHO05D000129 2.4e-11 72.4 91 46.2
BcaB04g18601 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-11 71.6 90 42.2
Carub.0005s0270 Capsella rubella HOM05D000209 ORTHO05D000129 5.3e-11 71.2 87 43.7
BcaC05g28768 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-10 69.7 71 50.7
BraA03t12823Z Brassica rapa HOM05D000209 ORTHO05D000129 2.0e-10 69.3 90 42.2
A05p32210 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-10 68.9 71 52.1
A03p36560 Brassica napus HOM05D000209 ORTHO05D000129 5.9e-10 67.8 90 41.1
BraA05t22051Z Brassica rapa HOM05D000209 ORTHO05D000129 7.7e-10 67.4 71 50.7
Carub.0005s0269 Capsella rubella HOM05D000209 ORTHO05D000129 7.7e-10 67.4 90 38.9
AT1G77650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-09 66.2 104 41.3
Thhalv10011043m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.2e-09 65.9 82 43.9
Thhalv10024004m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.8e-09 65.1 92 43.5
Aa31LG7G790 Aethionema arabicum HOM05D000209 ORTHO05D000129 5.0e-09 64.7 96 38.5
BcaC01g03226 Brassica carinata HOM05D000209 ORTHO05D000129 5.0e-09 64.7 89 37.1
C03p54560 Brassica napus HOM05D000209 ORTHO05D000129 5.0e-09 64.7 89 37.1
BolC3t17743H Brassica oleracea HOM05D000209 ORTHO05D000129 5.0e-09 64.7 89 37.1
BraA09t36769Z Brassica rapa HOM05D000209 ORTHO05D000129 6.5e-09 64.3 89 40.4
Carub.0003s0964 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-08 63.5 105 40.0
THA.LOC104820267 Tarenaya hassleriana HOM05D000209 ORTHO05D000129 1.5e-08 63.2 87 41.4
C05p48750 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-08 62.8 71 47.9
BolC5t33611H Brassica oleracea HOM05D000209 ORTHO05D000129 1.9e-08 62.8 71 47.9
Thhalv10000601m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-08 62.8 100 37.0
Thhalv10006465m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-08 62.8 97 37.1
A03p11710 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-08 62.4 82 46.3
BraA03t10482Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-08 62.4 82 46.3
Carub.0003s0788 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-08 62.4 70 47.1
BcaB01g04573 Brassica carinata HOM05D000209 ORTHO05D000129 3.2e-08 62.0 82 46.3
Carub.0003s1632 Capsella rubella HOM05D000209 ORTHO05D000129 3.2e-08 62.0 85 42.4
AL1G23440 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.2e-08 61.6 90 34.4
BcaC09g48724 Brassica carinata HOM05D000209 ORTHO05D000129 4.2e-08 61.6 72 48.6
A09p64060 Brassica napus HOM05D001827 ORTHO05D001790 4.2e-08 61.6 90 37.8
C01p46570 Brassica napus HOM05D000209 ORTHO05D000129 4.2e-08 61.6 72 48.6
BolC1t04622H Brassica oleracea HOM05D000209 ORTHO05D000129 4.2e-08 61.6 72 48.6
BolC8t52305H Brassica oleracea HOM05D001827 ORTHO05D001790 4.2e-08 61.6 90 37.8
BraA09t41752Z Brassica rapa HOM05D001827 ORTHO05D001790 4.2e-08 61.6 90 37.8
CARHR099050 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.2e-08 61.6 89 39.3
AL3G29510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.5e-08 61.2 85 42.4
BcaB06g25830 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-08 61.2 70 48.6
AT3G17710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.2e-08 60.8 91 39.6
A09p11310 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-08 60.8 89 39.3
BraA03t13547Z Brassica rapa HOM05D000209 ORTHO05D000129 7.2e-08 60.8 89 36.0
AT3G08750 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.4e-08 60.5 111 35.1
AT3G16590 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.4e-08 60.5 85 42.4
Carub.0002s0273 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-07 60.1 92 38.0
THA.LOC104820436 Tarenaya hassleriana HOM05D000209 ORTHO05D000129 1.2e-07 60.1 87 37.9
AT1G12170 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.6e-07 59.7 103 33.0
A01p36700 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-07 59.7 72 47.2
A03p01940 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-07 59.7 94 38.3
BraA01t03733Z Brassica rapa HOM05D000209 ORTHO05D000129 1.6e-07 59.7 72 47.2
BraA03t09563Z Brassica rapa HOM05D000209 ORTHO05D000129 1.6e-07 59.7 94 38.3
Carub.0001s3616 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-07 59.7 72 40.3
Carub.0004s0843 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-07 59.7 98 34.7
Carub.0006s3257 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-07 59.7 92 40.2
BcaB08g34452 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-07 59.3 89 34.8
BcaC05g29467 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-07 59.3 91 40.7
C05p57730 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-07 59.3 91 40.7
BolC5t34430H Brassica oleracea HOM05D000209 ORTHO05D000129 2.1e-07 59.3 91 40.7
Carub.0003s3133 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-07 59.3 89 38.2
AL3G41320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.9 90 35.6
AL3G41660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.9 86 38.4
AL5G30970 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-07 58.9 82 39.0
A03p44180 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-07 58.9 89 36.0
C03p00590 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-07 58.9 94 41.5
BolC3t12624H Brassica oleracea HOM05D000209 ORTHO05D000129 2.7e-07 58.9 94 41.5
AL3G30620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-07 58.5 88 40.9
BcaB04g18599 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-07 58.5 102 36.3
BcaB04g18600 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-07 58.5 102 36.3
BcaC04g22980 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-07 58.5 88 38.6
Aa31LG8G9240 Aethionema arabicum HOM05D000209 ORTHO05D000129 4.7e-07 58.2 101 36.6
AT3G59590 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.7e-07 58.2 104 34.6
BcaB01g06091 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-07 58.2 94 41.5
BcaB01g06092 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-07 58.2 94 41.5
BcaB04g18597 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-07 58.2 99 35.4
AT3G17480 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.1e-07 57.8 90 35.6
C05p50670 Brassica napus HOM05D000209 ORTHO05D000129 6.1e-07 57.8 90 36.7
BolC5t33815H Brassica oleracea HOM05D000209 ORTHO05D000129 6.1e-07 57.8 90 36.7
THA.LOC104820433 Tarenaya hassleriana HOM05D000209 ORTHO05D000129 6.1e-07 57.8 89 39.3
BcaB01g05926 Brassica carinata HOM05D000209 ORTHO05D000129 8.0e-07 57.4 94 40.4
BolC3t12782H Brassica oleracea HOM05D000209 ORTHO05D000129 8.0e-07 57.4 94 40.4
BcaB03g12436 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-06 57.0 87 40.2
BcaB04g21211 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-06 57.0 87 40.2
C08p47640 Brassica napus HOM05D001827 ORTHO05D001790 1.0e-06 57.0 90 34.4
Carub.0004s1988 Capsella rubella HOM05D000209 ORTHO05D000129 1.0e-06 57.0 73 47.9
CARHR266870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.0e-06 57.0 101 34.7
AL3G28670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 56.6 90 33.3
AT3G10430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-06 56.6 86 39.5
BcaB04g18598 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 56.6 103 34.0
A01p36440 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-06 56.6 89 39.3
BraA01t03707Z Brassica rapa HOM05D002896 ORTHO05D003263 1.4e-06 56.6 89 39.3
BraA07t31690Z Brassica rapa HOM05D000209 ORTHO05D000129 1.4e-06 56.6 91 35.2
Thhalv10022075m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.4e-06 56.6 86 36.0
Sp3g14050 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.4e-06 56.6 86 34.9
A03p36550 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-06 56.2 90 37.8
C06p49990 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-06 56.2 90 35.6
BolC6t40038H Brassica oleracea HOM05D000209 ORTHO05D000129 1.8e-06 56.2 90 35.6
CARHR120300 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.8e-06 56.2 93 31.2
AL2G24872 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.3e-06 55.8 88 37.5
BcaC05g28942 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-06 55.8 88 36.4
BolC5t33817H Brassica oleracea HOM05D000209 ORTHO05D000129 2.3e-06 55.8 88 36.4
Carub.0004s0842 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-06 55.8 89 32.6
AL3G29460 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-06 55.5 91 35.2
A07p41550 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-06 55.5 90 35.6
A07p41580 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-06 55.5 90 35.6
A09p43800 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-06 55.5 82 36.6
BraA07t31687Z Brassica rapa HOM05D000209 ORTHO05D000129 3.0e-06 55.5 90 35.6
Carub.0003s1726 Capsella rubella HOM05D000209 ORTHO05D000129 3.0e-06 55.5 91 37.4
CARHR107440 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-06 55.5 76 42.1
Thhalv10015389m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.0e-06 55.5 73 43.8
AT2G04920 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.0e-06 55.1 101 34.7
BcaB06g25681 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-06 55.1 86 34.9
A03p36580 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-06 55.1 105 34.3
CARHR248580 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.0e-06 55.1 104 33.7
Thhalv10001171m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.0e-06 55.1 93 33.3
AL3G30320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-06 54.7 92 34.8
AL8G10750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-06 54.7 104 31.7
A01p41820 Brassica napus HOM05D000209 ORTHO05D000129 5.2e-06 54.7 89 38.2
A03p02340 Brassica napus HOM05D000209 ORTHO05D000129 5.2e-06 54.7 95 37.9
Carub.0003s1866 Capsella rubella HOM05D000209 ORTHO05D000129 5.2e-06 54.7 100 34.0
CARHR090170 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.2e-06 54.7 91 35.2
Thhalv10003102m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.2e-06 54.7 101 30.7
Thhalv10027458m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.2e-06 54.7 99 37.4
AL3G41620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-06 54.3 98 35.7
BcaB04g21208 Brassica carinata HOM05D000209 ORTHO05D000129 6.7e-06 54.3 89 41.6
A05p33700 Brassica napus HOM05D000209 ORTHO05D000129 6.7e-06 54.3 88 36.4
AL3G41350 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.8e-06 53.9 89 32.6
AL3G42550 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.8e-06 53.9 90 33.3
AT1G62270 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.8e-06 53.9 103 35.0
BcaB04g20830 Brassica carinata HOM05D000209 ORTHO05D000129 8.8e-06 53.9 72 43.1
BcaB04g21206 Brassica carinata HOM05D000209 ORTHO05D000129 8.8e-06 53.9 94 36.2
A09p43750 Brassica napus HOM05D000209 ORTHO05D000129 8.8e-06 53.9 82 35.4
A09p43790 Brassica napus HOM05D000209 ORTHO05D000129 8.8e-06 53.9 82 34.1
CARHR106550 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.8e-06 53.9 71 39.4


User provided reference genes

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