Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p50020 Brassica napus HOM05D000224 ORTHO05D024399 2.6e-50 201.8 106 100.0
BolC3t17293H Brassica oleracea HOM05D000224 ORTHO05D024399 2.6e-50 201.8 106 100.0
A03p40970 Brassica napus HOM05D000224 ORTHO05D024399 3.6e-36 154.8 102 84.3
BraA03t13255Z Brassica rapa HOM05D000224 ORTHO05D024399 8.0e-36 153.7 102 83.3
BcaC01g03656 Brassica carinata HOM05D000224 ORTHO05D024399 8.6e-30 133.7 70 97.1
Sp3g17130 Schrenkiella parvula HOM05D000224 ORTHO05D000337 1.4e-24 116.3 146 50.0
BcaC05g28550 Brassica carinata HOM05D000224 ORTHO05D000337 1.2e-23 113.2 131 52.7
AL3G32410 Arabidopsis lyrata HOM05D000224 ORTHO05D000337 2.3e-22 109.0 146 47.9
BcaC05g28549 Brassica carinata HOM05D000224 ORTHO05D000337 3.9e-22 108.2 146 47.9
A05p30560 Brassica napus HOM05D000224 ORTHO05D000337 3.9e-22 108.2 146 47.3
BraA05t21897Z Brassica rapa HOM05D000224 ORTHO05D000337 3.9e-22 108.2 146 47.3
BcaB06g25956 Brassica carinata HOM05D000224 ORTHO05D000337 5.0e-22 107.8 146 47.3
BolC5t33364H Brassica oleracea HOM05D000224 ORTHO05D000337 2.5e-21 105.5 146 46.6
C05p46430 Brassica napus HOM05D000224 ORTHO05D000337 1.6e-20 102.8 146 45.9
BolC5t33370H Brassica oleracea HOM05D000224 ORTHO05D000337 1.6e-20 102.8 146 45.9
C05p46350 Brassica napus HOM05D000224 ORTHO05D000337 6.2e-20 100.9 146 45.2
Aa31LG8G5850 Aethionema arabicum HOM05D000224 ORTHO05D000337 8.1e-20 100.5 146 45.2
THA.LOC104803445 Tarenaya hassleriana HOM05D000224 ORTHO05D000337 1.6e-15 86.3 146 39.7
Carub.0003s1886 Capsella rubella HOM05D000224 ORTHO05D000337 7.8e-15 84.0 115 46.1
Thhalv10021911m.g Eutrema salsugineum HOM05D000224 ORTHO05D000337 1.5e-13 79.7 117 48.7
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 2.1e-12 75.9 103 39.8
FAN24G1272 Fragaria x ananassa HOM05D000224 ORTHO05D000337 3.6e-12 75.1 100 42.0
Lj9A228T13 Lonicera japonica HOM05D000224 ORTHO05D000337 1.1e-11 73.6 101 39.6
AUR62016640 Chenopodium quinoa HOM05D000224 ORTHO05D000337 8.9e-11 70.5 91 41.8
Lj9C226T5 Lonicera japonica HOM05D000224 ORTHO05D000337 8.9e-11 70.5 101 37.6
DCAR_025695 Daucus carota HOM05D000224 ORTHO05D000337 1.5e-10 69.7 107 36.4
Peaxi162Scf00016g01421 Petunia axillaris HOM05D000224 ORTHO05D000337 2.6e-10 68.9 117 39.3
Haze_15197 Corylus avellana HOM05D000224 ORTHO05D000337 2.2e-09 65.9 95 38.9
arahy.Tifrunner.gnm1.ann1.JI3QAC Arachis hypogaea HOM05D000224 ORTHO05D000337 3.8e-09 65.1 76 47.4
Prupe.8G115000 Prunus persica HOM05D000224 ORTHO05D000337 1.1e-08 63.5 123 35.8
QL06p043382 Quercus lobata HOM05D000224 ORTHO05D000337 1.9e-08 62.8 95 35.8
Sopen01g050970 Solanum pennellii HOM05D000224 ORTHO05D000337 1.9e-08 62.8 72 47.2
Atru.ctg1152.2 Acer truncatum HOM05D000224 ORTHO05D000337 5.4e-08 61.2 80 38.8
Thecc.02G094500 Theobroma cacao HOM05D000224 ORTHO05D000337 7.1e-08 60.8 144 31.2
Gohir.D12G026200 Gossypium hirsutum HOM05D000224 ORTHO05D000337 9.2e-08 60.5 149 29.5
Gorai.008G026500 Gossypium raimondii HOM05D000224 ORTHO05D000337 9.2e-08 60.5 149 29.5
QL11p038697 Quercus lobata HOM05D000224 ORTHO05D000337 9.2e-08 60.5 145 31.0
Duzib132G1039 Durio zibethinus HOM05D000224 ORTHO05D000337 1.2e-07 60.1 136 30.1
FAN19G0021 Fragaria x ananassa HOM05D000224 ORTHO05D000337 1.2e-07 60.1 105 38.1
Prupe.8G115300 Prunus persica HOM05D000224 ORTHO05D000337 1.2e-07 60.1 123 33.3
Lj7A43G13 Lonicera japonica HOM05D000224 ORTHO05D000337 1.6e-07 59.7 95 34.7
GSVIVG01005069001 Vitis vinifera HOM05D000224 ORTHO05D000337 1.6e-07 59.7 97 37.1
COL.COLO4_11729 Corchorus olitorius HOM05D000018 ORTHO05D001172 2.1e-07 59.3 144 29.9
FAN19G2536 Fragaria x ananassa HOM05D000224 ORTHO05D000337 2.7e-07 58.9 105 37.1
FAN28G2521 Fragaria x ananassa HOM05D000224 ORTHO05D000337 2.7e-07 58.9 105 37.1
PGSC0003DMG400025728 Solanum tuberosum HOM05D000224 ORTHO05D000337 2.7e-07 58.9 101 35.6
Glyma.01G182700 Glycine max HOM05D000224 ORTHO05D000337 3.5e-07 58.5 99 35.4
ECA246G0843 Erigeron canadensis HOM05D000224 ORTHO05D000337 4.6e-07 58.2 100 35.0
CiPaw.06G140800 Carya illinoinensis HOM05D000224 ORTHO05D000337 7.8e-07 57.4 145 29.7
ECA246G3527 Erigeron canadensis HOM05D000224 ORTHO05D000337 7.8e-07 57.4 105 35.2
FAN27G3334 Fragaria x ananassa HOM05D000224 ORTHO05D000337 7.8e-07 57.4 144 30.6
Lsat_1_v5_gn_3_91921 Lactuca sativa HOM05D000224 ORTHO05D000337 7.8e-07 57.4 105 34.3
AUR62011419 Chenopodium quinoa HOM05D000224 ORTHO05D000337 1.0e-06 57.0 151 28.5
Sc08g0000190 Simmondsia chinensis HOM05D000224 ORTHO05D000337 1.0e-06 57.0 126 32.5
Actinidia00467 Actinidia chinensis HOM05D000224 ORTHO05D000337 1.7e-06 56.2 120 31.7
Manes.17G095000 Manihot esculenta HOM05D000224 ORTHO05D000337 1.7e-06 56.2 147 32.7
Aqoxy6G00913 Aquilegia oxysepala HOM05D000224 ORTHO05D000337 2.3e-06 55.8 146 29.5
PSO675G7320 Papaver somniferum HOM05D000224 ORTHO05D000337 2.3e-06 55.8 132 27.3
DCAR_025693 Daucus carota HOM05D000224 ORTHO05D000337 3.0e-06 55.5 102 37.3
Lj9C227T1 Lonicera japonica HOM05D000224 ORTHO05D000337 3.0e-06 55.5 142 29.6
Lj9C363T4 Lonicera japonica HOM05D000224 ORTHO05D000337 3.0e-06 55.5 142 27.5
QL11p038700 Quercus lobata HOM05D000224 ORTHO05D000337 3.0e-06 55.5 145 28.3
Lj9A226T20 Lonicera japonica HOM05D000224 ORTHO05D000337 3.9e-06 55.1 142 28.9
TAR625G1073 Trochodendron aralioides HOM05D000224 ORTHO05D000337 3.9e-06 55.1 125 29.6
CSS0020526 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D000337 5.1e-06 54.7 137 29.9
Cc02_g18340 Coffea canephora HOM05D000224 ORTHO05D000337 5.1e-06 54.7 145 29.0
Eucgr.H01984 Eucalyptus grandis HOM05D000224 ORTHO05D000337 5.1e-06 54.7 101 35.6
Lj9C252T0 Lonicera japonica HOM05D000224 ORTHO05D000337 5.1e-06 54.7 142 28.9
CAN.G322.58 Capsicum annuum HOM05D000224 ORTHO05D000337 6.6e-06 54.3 147 30.6
CsaV3_2G014230 Cucumis sativus L. HOM05D000224 ORTHO05D000337 6.6e-06 54.3 145 33.1
PSO675G0539 Papaver somniferum HOM05D000224 ORTHO05D000337 6.6e-06 54.3 139 25.9
Zm00001eb142080 Zea mays HOM05D000224 ORTHO05D000337 6.6e-06 54.3 87 36.8
COL.COLO4_11333 Corchorus olitorius HOM05D000224 ORTHO05D000337 8.6e-06 53.9 103 33.0
TWI31G0375 Tripterygium wilfordii HOM05D000224 ORTHO05D000337 8.6e-06 53.9 144 29.2


User provided reference genes

Program Settings