Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.2e-73 278.9 140 100.0
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 7.8e-71 270.4 140 98.6
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 3.0e-70 268.5 141 97.2
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 3.0e-70 268.5 140 95.0
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 5.2e-67 257.7 140 92.1
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 5.2e-67 257.7 140 93.6
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 5.2e-67 257.7 140 92.1
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 5.2e-67 257.7 140 92.1
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 6.8e-67 257.3 140 92.9
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 6.8e-67 257.3 140 91.4
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 6.8e-67 257.3 140 92.1
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 4.4e-66 254.6 140 90.7
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 9.8e-66 253.4 140 89.3
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.2e-58 229.9 141 83.7
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.5e-58 229.6 141 83.7
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.0e-58 229.2 141 83.0
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 2.0e-58 229.2 141 84.4
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 7.3e-53 210.7 135 77.8
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.3e-49 199.9 133 74.4
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 4.6e-47 191.4 144 67.4
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.3e-46 189.1 133 67.7
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.5e-45 186.4 135 68.9
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.5e-45 186.4 126 73.8
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 9.6e-45 183.7 139 65.5
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 9.6e-45 183.7 134 66.4
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 2.1e-44 182.6 132 67.4
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.8e-44 182.2 131 69.5
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 2.8e-44 182.2 131 69.5
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 4.7e-44 181.4 131 67.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 4.7e-44 181.4 132 66.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 6.2e-44 181.0 130 64.6
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 8.1e-44 180.6 127 70.1
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.1e-43 180.3 135 64.4
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 1.8e-43 179.5 127 69.3
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.4e-43 179.1 131 67.9
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.4e-43 179.1 131 66.4
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 4.0e-43 178.3 132 66.7
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 6.9e-43 177.6 127 69.3
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 8.9e-43 177.2 128 64.1
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 2.0e-42 176.0 126 67.5
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.6e-42 175.6 127 67.7
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 2.6e-42 175.6 133 61.7
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.6e-42 175.6 126 65.9
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 4.4e-42 174.9 113 70.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 5.8e-42 174.5 137 65.0
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 7.6e-42 174.1 127 64.6
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.9e-42 173.7 125 63.2
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.7e-41 172.9 134 62.7
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 1.7e-41 172.9 131 65.6
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.7e-41 172.9 126 63.5
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 1.7e-41 172.9 108 75.0
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 2.2e-41 172.6 130 66.2
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 2.2e-41 172.6 133 64.7
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 2.9e-41 172.2 132 62.9
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 4.9e-41 171.4 108 75.9
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 4.9e-41 171.4 114 71.1
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.9e-41 171.4 114 71.1
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 6.4e-41 171.0 115 69.6
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 6.4e-41 171.0 117 70.1
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.1e-40 170.2 125 64.0
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.1e-40 170.2 126 61.9
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 1.4e-40 169.9 129 65.9
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.4e-40 169.9 108 74.1
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.4e-40 169.9 132 61.4
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.4e-40 169.9 124 64.5
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.9e-40 169.5 132 63.6
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.9e-40 169.5 133 65.4
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.4e-40 169.1 102 73.5
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 3.2e-40 168.7 125 62.4
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.2e-40 168.7 129 65.1
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 4.2e-40 168.3 130 61.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 4.2e-40 168.3 133 63.2
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 4.2e-40 168.3 113 69.0
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.2e-40 168.3 135 61.5
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 5.4e-40 167.9 131 64.9
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.4e-40 167.9 125 60.0
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 5.4e-40 167.9 102 73.5
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 5.4e-40 167.9 100 74.0
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.3e-40 167.2 127 64.6
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 9.3e-40 167.2 123 64.2
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.2e-39 166.8 131 66.4
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 1.6e-39 166.4 102 72.5
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 1.6e-39 166.4 133 65.4
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.7e-39 165.6 129 62.8
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.5e-39 165.2 103 72.8
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 3.5e-39 165.2 113 67.3
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 3.5e-39 165.2 124 62.9
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 4.6e-39 164.9 126 62.7
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 4.6e-39 164.9 98 77.6
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 6.0e-39 164.5 131 63.4
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.0e-38 163.7 121 63.6
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.3e-38 162.5 126 61.9
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 2.3e-38 162.5 108 68.5
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 3.9e-38 161.8 125 64.8
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 5.1e-38 161.4 108 68.5
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 6.6e-38 161.0 108 66.7
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 6.6e-38 161.0 126 64.3
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 8.7e-38 160.6 108 69.4
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.5e-37 159.8 132 56.1
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.5e-37 159.1 108 64.8
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 5.6e-37 157.9 108 66.7
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 1.6e-36 156.4 108 66.7
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.6e-36 155.2 119 61.3
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 6.9e-35 151.0 135 57.8
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-35 150.6 162 50.0
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 2.2e-33 146.0 87 77.0
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 6.4e-33 144.4 84 77.4
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 6.4e-33 144.4 114 66.7
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 6.4e-33 144.4 137 56.2
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 8.4e-33 144.1 173 48.0
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 1.1e-32 143.7 112 64.3
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 7.1e-32 141.0 110 60.9
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 7.1e-32 141.0 136 52.2
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.5e-29 133.3 86 68.6
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.8e-28 128.3 114 57.0
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.4e-27 125.9 97 54.6
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.1e-27 125.6 85 67.1
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 3.4e-26 122.1 100 53.0
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 4.2e-24 115.2 100 50.0
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 7.9e-23 110.9 97 50.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.1e-21 107.1 61 77.0
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 1.4e-19 100.1 116 43.1
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.1e-19 99.0 61 70.5
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 5.3e-19 98.2 61 68.9
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.2e-17 92.8 61 67.2
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 4.6e-15 85.1 85 45.9
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.1e-13 80.5 49 75.5
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.9e-13 79.7 48 77.1
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 4.3e-13 78.6 92 50.0
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.8e-12 75.9 69 58.0
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 8.2e-12 74.3 44 75.0
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.4e-11 73.6 42 78.6
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 5.3e-11 71.6 57 52.6
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 7.6e-10 67.8 54 51.9
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 1.7e-09 66.6 34 85.3
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 7.2e-08 61.2 96 32.3
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 7.2e-08 61.2 131 26.7
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 6.7e-06 54.7 66 40.9


User provided reference genes

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