Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 7.4e-209 730.3 378 100.0
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 7.7e-198 693.7 378 96.3
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 3.9e-194 681.4 378 94.4
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 3.8e-189 664.8 377 92.6
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 1.7e-184 649.4 374 92.8
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 3.5e-182 641.7 374 90.9
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 7.5e-169 597.4 374 85.0
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 3.8e-165 585.1 374 83.2
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 2.9e-160 568.9 372 80.6
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.0e-157 560.5 372 79.3
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 3.0e-157 558.9 369 80.5
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 6.6e-157 557.8 372 79.0
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 5.2e-154 548.1 372 77.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.5e-153 546.6 359 81.1
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.3e-152 543.5 359 80.2
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.3e-152 543.5 374 78.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 3.7e-152 542.0 359 80.2
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.0e-141 505.8 376 72.3
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 5.6e-140 501.5 390 70.3
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 8.1e-139 497.7 375 71.2
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.8e-138 496.5 375 71.2
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.8e-138 496.5 375 70.4
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 1.5e-137 493.4 373 70.0
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.5e-137 493.4 375 70.7
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 2.6e-137 492.7 372 69.6
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.4e-135 486.9 380 68.9
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 9.2e-135 484.2 376 69.4
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 7.8e-134 481.1 377 69.0
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.2e-131 473.8 376 68.1
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 3.6e-131 472.2 376 67.8
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 4.7e-131 471.9 362 69.9
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 1.4e-127 460.3 413 62.7
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 3.2e-127 459.1 410 62.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.8e-123 446.0 305 79.3
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.8e-109 400.2 377 58.6
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 1.5e-108 397.1 376 56.9
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.5e-108 396.4 377 57.8
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 3.3e-108 396.0 376 56.6
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 5.6e-108 395.2 377 57.8
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 4.0e-106 389.0 376 55.9
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 5.3e-106 388.7 379 57.8
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 9.0e-106 387.9 379 54.9
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.0e-105 386.7 377 56.8
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 2.0e-105 386.7 380 54.5
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 3.4e-105 386.0 376 56.9
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 4.5e-105 385.6 379 54.6
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 7.6e-105 384.8 389 54.5
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.3e-104 384.0 379 56.7
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.5e-104 381.7 375 55.5
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 6.5e-104 381.7 380 55.8
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 1.1e-103 380.9 377 54.6
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.3e-103 377.9 374 55.1
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 9.3e-103 377.9 377 55.2
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 1.3e-101 374.0 384 53.9
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 1.8e-101 373.6 384 54.4
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 9.6e-100 367.9 379 53.6
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 2.4e-98 363.2 378 51.6
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 6.9e-98 361.7 382 50.8
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 1.2e-97 360.9 382 50.8
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 2.0e-97 360.1 380 52.9
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.6e-97 359.8 376 51.1
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 5.9e-97 358.6 381 54.1
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 1.3e-96 357.5 380 52.6
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 1.3e-96 357.5 380 52.6
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 1.3e-96 357.5 376 50.5
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.2e-96 356.7 379 52.2
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 2.9e-96 356.3 380 52.6
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 6.5e-96 355.1 381 52.2
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 6.5e-96 355.1 382 50.0
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 6.5e-96 355.1 375 49.9
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 8.5e-96 354.8 376 50.0
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.1e-95 354.4 376 52.7
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 1.1e-95 354.4 376 50.5
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 5.5e-95 352.1 381 49.3
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 7.2e-95 351.7 376 52.1
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 7.2e-95 351.7 374 52.1
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 9.3e-95 351.3 382 50.3
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 9.3e-95 351.3 378 50.5
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 1.2e-94 350.9 381 50.9
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 1.2e-94 350.9 376 51.9
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.2e-94 350.9 378 50.8
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 4.6e-94 349.0 376 49.2
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 6.1e-94 348.6 376 48.9
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.3e-93 347.4 404 48.0
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 5.1e-93 345.5 375 49.6
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 5.1e-93 345.5 381 50.7
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.1e-92 344.4 379 50.7
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 7.4e-92 341.7 378 48.4
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 9.7e-92 341.3 381 50.9
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 9.7e-92 341.3 373 48.3
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 1.3e-91 340.9 378 49.2
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 2.2e-91 340.1 377 50.7
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 6.3e-91 338.6 374 50.8
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 1.1e-90 337.8 379 49.3
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 2.4e-90 336.7 380 48.9
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 1.2e-89 334.3 376 48.4
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.0e-89 333.6 397 48.6
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 3.4e-89 332.8 416 44.5
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 7.7e-89 331.6 332 56.0
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 1.7e-88 330.5 376 49.5
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 2.2e-88 330.1 378 48.1
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.8e-88 329.3 380 49.2
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 6.5e-88 328.6 381 49.6
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 8.5e-88 328.2 376 48.4
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 9.4e-87 324.7 380 47.6
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 2.7e-86 323.2 319 54.9
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 4.6e-86 322.4 376 48.4
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 1.1e-84 317.8 411 44.8
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 2.0e-84 317.0 340 50.0
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 9.7e-84 314.7 371 48.2
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 9.7e-84 314.7 500 41.4
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 3.7e-83 312.8 327 54.1
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 4.8e-83 312.4 293 55.3
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 9.1e-82 308.1 403 43.2
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 4.5e-81 305.8 519 39.3
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 1.7e-80 303.9 287 55.4
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.2e-80 303.5 361 46.8
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 8.5e-80 301.6 326 54.3
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 4.2e-79 299.3 330 50.9
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 9.4e-79 298.1 381 45.7
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 3.9e-77 292.7 374 45.5
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 6.7e-77 292.0 377 45.9
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.1e-76 291.2 379 42.2
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 2.0e-76 290.4 378 41.8
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.2e-75 287.0 380 43.9
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 4.1e-74 282.7 328 50.0
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 3.2e-71 273.1 322 48.4
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.2e-68 264.6 575 36.0
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 6.3e-67 258.8 319 46.1
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.5e-65 253.1 208 63.5
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 5.0e-64 249.2 206 61.2
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 9.4e-63 245.0 208 58.2
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 7.5e-60 235.3 227 53.7
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 2.2e-59 233.8 207 57.0
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.2e-54 218.0 163 67.5
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.1e-54 217.2 165 67.3
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 2.8e-54 216.9 486 31.3
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 8.0e-54 215.3 326 37.7
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.3e-53 213.8 165 66.7
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 4.0e-53 213.0 165 66.7
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 4.0e-53 213.0 309 43.4
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.0e-52 210.7 165 66.1
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 3.4e-52 209.9 165 63.6
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.4e-52 209.5 162 66.0
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 1.4e-50 204.5 391 35.3
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 2.0e-49 200.7 345 36.2
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.1e-47 194.9 165 63.0
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 2.0e-44 184.1 319 36.7
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.9e-43 180.3 164 56.7
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.1e-42 178.3 215 47.9
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.1e-42 178.3 391 32.2
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.2e-42 176.8 215 48.4
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 4.1e-42 176.4 388 32.0
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 3.5e-41 173.3 390 33.1
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 7.8e-41 172.2 212 48.1
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.0e-40 169.5 232 47.0
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 3.3e-39 166.8 305 39.0
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 7.3e-39 165.6 380 32.1
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 1.6e-38 164.5 255 38.4
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 6.2e-38 162.5 387 30.0
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.0e-32 145.2 126 60.3
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 2.3e-32 144.1 123 58.5
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 1.1e-31 141.7 385 28.3
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-31 141.0 110 66.4
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 6.2e-30 136.0 217 37.3
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.8e-29 134.4 152 51.3
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 2.3e-24 117.5 175 43.4
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 2.5e-23 114.0 134 43.3
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 9.5e-23 112.1 169 40.8
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 1.4e-21 108.2 169 39.6
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 2.0e-20 104.4 182 36.8
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 5.4e-18 96.3 148 42.6
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 2.1e-17 94.4 147 42.2
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.1e-17 94.4 145 40.0
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 2.3e-16 90.9 234 30.8
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 6.2e-14 82.8 314 29.0
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 9.6e-07 58.9 273 25.3


User provided reference genes

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