Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p49190 Brassica napus HOM05D000209 ORTHO05D000129 5.5e-52 207.2 95 100.0
BraA03t13195Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-48 196.1 95 93.7
BraA03t13193Z Brassica rapa HOM05D000209 ORTHO05D000129 3.7e-48 194.5 95 92.6
BcaC01g03732 Brassica carinata HOM05D000209 ORTHO05D000129 3.4e-46 188.0 91 95.6
BolC3t17200H Brassica oleracea HOM05D000209 ORTHO05D000129 3.4e-46 188.0 91 95.6
A03p40390 Brassica napus HOM05D000209 ORTHO05D000129 2.9e-45 184.9 92 90.2
AL3G30850 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.7e-16 88.2 109 44.0
BolC5t33256H Brassica oleracea HOM05D000209 ORTHO05D000129 7.2e-12 73.9 93 45.2
C05p45320 Brassica napus HOM05D000209 ORTHO05D000129 9.5e-12 73.6 93 45.2
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.8e-10 69.3 101 41.6
AT3G19560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.2e-10 67.8 102 37.3
CARHR096520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.2e-10 67.8 98 41.8
BcaC05g28463 Brassica carinata HOM05D000209 ORTHO05D000129 8.8e-10 67.0 95 43.2
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-09 66.6 106 40.6
Carub.0003s1661 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-09 66.6 103 40.8
AL1G53830 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.0e-09 65.9 106 41.5
BcaC05g28458 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-09 65.9 95 42.1
C05p45490 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-09 65.9 95 42.1
BolC5t33258H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-09 65.9 92 43.5
BolC7t44630H Brassica oleracea HOM05D000209 ORTHO05D000129 4.4e-09 64.7 109 40.4
BolC9t58027H Brassica oleracea HOM05D000209 ORTHO05D000129 4.4e-09 64.7 109 40.4
BraA10t43735Z Brassica rapa HOM05D000209 ORTHO05D000129 4.4e-09 64.7 109 40.4
AL3G53140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.7e-09 64.3 107 40.2
BcaC04g19787 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-09 64.3 109 40.4
Sp7g29450 Schrenkiella parvula HOM05D000209 ORTHO05D000129 7.5e-09 63.9 96 40.6
AL3G50860 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.8e-09 63.5 103 37.9
Thhalv10022148m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-08 63.2 96 43.8
AT3G22940 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-08 62.8 102 45.1
A05p30060 Brassica napus HOM05D000209 ORTHO05D000129 2.2e-08 62.4 95 41.1
AT3G22770 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.7e-08 61.6 102 39.2
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 4.9e-08 61.2 114 37.7
AT3G19470 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.3e-08 60.8 102 40.2
CARHR092160 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.3e-08 60.8 108 37.0
Thhalv10022393m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.3e-08 60.8 102 41.2
AL3G38080 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.3e-08 60.5 103 39.8
AL4G21820 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.3e-08 60.5 103 39.8
AL8G24290 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.3e-08 60.5 102 42.2
BcaNung00144 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-07 60.1 105 33.3
BcaB02g06977 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-07 59.7 97 35.1
BcaB02g06982 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-07 59.7 97 35.1
BraA05t21809Z Brassica rapa HOM05D000209 ORTHO05D000129 1.4e-07 59.7 118 33.9
Carub.0003s2561 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-07 59.7 107 37.4
Carub.0003s2631 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-07 59.7 96 39.6
AL6G52510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.8e-07 59.3 100 36.0
A05p29240 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-07 59.3 118 33.9
AL3G36710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-07 58.9 100 42.0
AL3G53160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-07 58.9 106 37.7
AT5G42460 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.4e-07 58.9 103 36.9
BcaB06g25681 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-07 58.9 108 38.0
CARHR092000 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.4e-07 58.9 108 37.0
AL6G44790 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.1e-07 58.2 100 37.0
AT2G17830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-07 58.2 104 37.5
AT5G36200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-07 58.2 101 38.6
BolC5t33269H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-07 58.2 93 38.7
Carub.0003s1761 Capsella rubella HOM05D000209 ORTHO05D000129 4.1e-07 58.2 104 35.6
BcaB04g19147 Brassica carinata HOM05D000209 ORTHO05D000129 7.0e-07 57.4 100 38.0
C05p45310 Brassica napus HOM05D000209 ORTHO05D000129 7.0e-07 57.4 97 37.1
BolC3t17813H Brassica oleracea HOM05D000209 ORTHO05D000129 7.0e-07 57.4 103 34.0
AT3G17320 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.2e-07 57.0 104 34.6
BcaC01g03174 Brassica carinata HOM05D000209 ORTHO05D000129 9.2e-07 57.0 103 34.0
BolC3t17814H Brassica oleracea HOM05D000209 ORTHO05D000129 9.2e-07 57.0 103 34.0
Carub.0003s2032 Capsella rubella HOM05D000209 ORTHO05D000129 9.2e-07 57.0 117 35.9
Carub.0008s1027 Capsella rubella HOM05D000209 ORTHO05D000129 9.2e-07 57.0 101 38.6
AL7G17020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 105 37.1
BcaC09g48583 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 106 35.8
AL8G23220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-06 56.2 101 38.6
AT3G22730 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.6e-06 56.2 102 37.3
Carub.0004s0861 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-06 56.2 104 39.4
CARHR192030 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-06 56.2 105 36.2
AL3G30600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.0e-06 55.8 103 35.9
BcaB06g26020 Brassica carinata HOM05D000209 ORTHO05D021640 2.0e-06 55.8 104 35.6
C05p45470 Brassica napus HOM05D000209 ORTHO05D001930 2.0e-06 55.8 93 37.6
Thhalv10000550m.g Eutrema salsugineum HOM05D000209 ORTHO05D020214 2.0e-06 55.8 96 38.5
AL2G23540 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 101 33.7
AL4G35640 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 98 34.7
A01p38090 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-06 55.5 106 34.9
AL3G40140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.5e-06 55.1 95 43.2
AT3G16740 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.5e-06 55.1 105 36.2
BolC5t33271H Brassica oleracea HOM05D000209 ORTHO05D021640 3.5e-06 55.1 89 39.3
BraA08t33390Z Brassica rapa HOM05D000209 ORTHO05D000129 3.5e-06 55.1 107 36.4
Carub.0003s1295 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-06 55.1 106 34.9
Carub.0003s2562 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-06 55.1 104 34.6
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-06 55.1 108 36.1
Thhalv10022064m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-06 55.1 103 38.8
AL3G25960 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.5e-06 54.7 102 39.2
BcaB06g26018 Brassica carinata HOM05D000209 ORTHO05D021640 4.5e-06 54.7 97 39.2
Carub.0001s3046 Capsella rubella HOM05D000209 ORTHO05D000129 4.5e-06 54.7 112 35.7
CARHR151680 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.5e-06 54.7 104 36.5
CARHR189820 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.5e-06 54.7 82 40.2
AL1G54030 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.9e-06 54.3 80 38.8
BcaB04g20882 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-06 54.3 106 35.8
BcaB06g26016 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-06 54.3 93 38.7
BcaC05g28447 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-06 54.3 97 36.1
BraA01t03792Z Brassica rapa HOM05D000209 ORTHO05D000129 5.9e-06 54.3 106 34.0
Carub.0006s2303 Capsella rubella HOM05D000209 ORTHO05D000129 5.9e-06 54.3 108 37.0
AT3G17480 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.8e-06 53.9 101 38.6
C05p45480 Brassica napus HOM05D000209 ORTHO05D021640 7.8e-06 53.9 89 39.3
Carub.0002s0273 Capsella rubella HOM05D000209 ORTHO05D000129 7.8e-06 53.9 99 36.4
Carub.0008s1030 Capsella rubella HOM05D000209 ORTHO05D000129 7.8e-06 53.9 101 37.6
CARHR107470 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.8e-06 53.9 106 37.7
CARHR108730 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.8e-06 53.9 102 32.4


User provided reference genes

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