Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p48670 Brassica napus HOM05D001578 ORTHO05D001207 6.1e-33 143.7 78 100.0
BcaC01g03784 Brassica carinata HOM05D001578 ORTHO05D001207 7.2e-18 93.6 49 95.9
BcaB04g18932 Brassica carinata HOM05D001578 ORTHO05D001207 5.9e-12 73.9 57 75.4
Carub.0003s1688 Capsella rubella HOM05D001578 ORTHO05D001207 1.5e-10 69.3 67 71.6
A01p37160 Brassica napus HOM05D001578 ORTHO05D001207 3.3e-10 68.2 48 79.2
C01p47100 Brassica napus HOM05D001578 ORTHO05D001207 3.3e-10 68.2 48 79.2
BolC1t04676H Brassica oleracea HOM05D001578 ORTHO05D001207 3.3e-10 68.2 48 79.2
Thhalv10021672m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 3.3e-10 68.2 65 66.2
BraA01t03777Z Brassica rapa HOM05D001578 ORTHO05D001207 7.3e-10 67.0 48 77.1
BcaC09g48670 Brassica carinata HOM05D001578 ORTHO05D001207 9.5e-10 66.6 47 78.7
BcaB04g20862 Brassica carinata HOM05D001578 ORTHO05D001207 1.6e-09 65.9 51 72.5
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 1.0e-08 63.2 66 57.6
CARHR092390 Cardamine hirsuta HOM05D001578 ORTHO05D001207 3.1e-08 61.6 47 74.5
CARHR268400 Cardamine hirsuta HOM05D001578 ORTHO05D001207 5.2e-08 60.8 61 62.3
AL1G54460 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 3.4e-07 58.2 46 67.4
CARHR088530 Cardamine hirsuta HOM05D001578 ORTHO05D001207 1.3e-06 56.2 57 57.9
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 1.3e-06 56.2 54 59.3
BcaC08g42990 Brassica carinata HOM05D001578 ORTHO05D001207 2.2e-06 55.5 65 53.8
C06p02320 Brassica napus HOM05D001578 ORTHO05D001207 2.2e-06 55.5 65 53.8
CARHR088540 Cardamine hirsuta HOM05D001578 ORTHO05D001207 2.2e-06 55.5 60 58.3
A06p04790 Brassica napus HOM05D001578 ORTHO05D001207 2.9e-06 55.1 67 58.2
BraA06t23683Z Brassica rapa HOM05D001578 ORTHO05D001207 2.9e-06 55.1 67 58.2
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 3.7e-06 54.7 45 57.8
CARHR037580 Cardamine hirsuta HOM05D001578 ORTHO05D001207 4.9e-06 54.3 53 58.5


User provided reference genes

Program Settings