Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 2.6e-267 924.9 475 100.0
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 7.4e-81 305.4 341 50.4
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 7.4e-81 305.4 341 50.4
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-61 240.7 299 48.2
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 3.3e-57 226.9 259 49.8
BolC9t59809H Brassica oleracea HOM05D016815 ORTHO05D012489 1.1e-52 211.8 241 51.5
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 8.2e-48 195.7 384 37.5
BcaC09g50328 Brassica carinata HOM05D000018 ORTHO05D008577 1.2e-43 181.8 263 44.9
BolC6t35761H Brassica oleracea HOM05D016815 ORTHO05D012489 8.8e-42 175.6 184 50.0
BcaC06g33612 Brassica carinata HOM05D011670 ORTHO05D031889 5.2e-34 149.8 167 52.7
BcaC07g36896 Brassica carinata HOM05D004566 ORTHO05D000925 3.5e-30 137.1 374 34.0
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-30 136.3 251 37.5
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-30 136.0 441 28.8
BcaC07g39656 Brassica carinata HOM05D000722 ORTHO05D000590 2.9e-29 134.0 134 55.2
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 2.9e-29 134.0 115 58.3
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 4.3e-28 130.2 275 35.6
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 1.4e-26 125.2 269 35.7
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 2.3e-26 124.4 260 38.8
BolC6t35760H Brassica oleracea HOM05D023674 ORTHO05D033661 9.8e-25 119.0 122 51.6
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 2.2e-24 117.9 199 39.7
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 6.4e-24 116.3 199 39.7
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.1e-23 115.5 256 35.2
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 1.1e-23 115.5 219 38.4
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 9.2e-23 112.5 394 28.2
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-22 111.7 213 36.6
BcaB06g28487 Brassica carinata HOM05D011670 ORTHO05D027357 2.0e-22 111.3 186 39.2
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 4.6e-22 110.2 376 28.7
BolC9t59808H Brassica oleracea HOM05D023674 ORTHO05D016790 4.6e-22 110.2 159 45.3
C01p26600 Brassica napus HOM05D011670 ORTHO05D031889 5.0e-21 106.7 211 37.4
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 1.1e-20 105.5 179 36.9
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 4.3e-20 103.6 96 55.2
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 5.6e-20 103.2 375 29.3
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 3.6e-19 100.5 397 27.7
BcaB06g28484 Brassica carinata HOM05D011670 ORTHO05D027357 3.1e-18 97.4 112 50.9
BolC1t02602H Brassica oleracea HOM05D011670 ORTHO05D031889 6.8e-18 96.3 102 52.0
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 6.8e-18 96.3 84 58.3
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 8.9e-18 95.9 398 29.1
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 1.7e-16 91.7 200 35.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 2.2e-16 91.3 396 25.8
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-16 89.7 198 30.8
BcaB06g25898 Brassica carinata HOM05D011670 ORTHO05D012489 8.3e-16 89.4 145 40.0
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-15 87.4 165 38.2
C03p61460 Brassica napus HOM05D023674 ORTHO05D033661 5.4e-15 86.7 120 45.0
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 9.2e-15 85.9 84 54.8
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 2.3e-13 81.3 109 42.2
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 3.0e-13 80.9 189 36.0
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 1.1e-12 79.0 124 39.5
BcaB06g28485 Brassica carinata HOM05D011670 ORTHO05D001112 1.9e-12 78.2 100 47.0
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 3.3e-12 77.4 144 37.5
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 3.3e-12 77.4 177 33.9
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-12 76.6 212 31.6
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 1.2e-11 75.5 185 31.4
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 1.2e-11 75.5 224 31.7
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 2.8e-11 74.3 275 28.7
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 3.6e-11 73.9 177 34.5
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 4.7e-11 73.6 247 27.5
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-10 72.4 220 29.1
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 1.4e-10 72.0 247 29.1
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 4.0e-10 70.5 229 28.8
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 4.0e-10 70.5 195 31.3
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 5.2e-10 70.1 229 27.5
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 5.2e-10 70.1 229 27.5
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 6.8e-10 69.7 66 53.0
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 1.2e-09 68.9 91 46.2
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-09 68.9 242 29.8
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 1.5e-09 68.6 198 30.3
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 1.5e-09 68.6 134 37.3
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 2.0e-09 68.2 189 30.7
C02p30810 Brassica napus HOM05D009238 ORTHO05D012489 3.4e-09 67.4 86 41.9
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 3.4e-09 67.4 197 28.4
BolC2t10791H Brassica oleracea HOM05D009238 ORTHO05D019868 3.4e-09 67.4 108 37.0
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 5.8e-09 66.6 56 60.7
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 7.5e-09 66.2 187 32.1
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 9.9e-09 65.9 205 28.3
C08p28190 Brassica napus HOM05D023674 ORTHO05D033661 1.7e-08 65.1 96 41.7
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 2.2e-08 64.7 102 35.3
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 2.2e-08 64.7 91 37.4
C02p47500 Brassica napus HOM05D009238 ORTHO05D019868 2.2e-08 64.7 89 40.4
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 2.9e-08 64.3 61 49.2
C05p15940 Brassica napus HOM05D009238 ORTHO05D021611 3.7e-08 63.9 97 40.2
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 6.4e-08 63.2 237 27.0
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-08 62.8 222 26.1
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 1.1e-07 62.4 97 39.2
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 1.4e-07 62.0 258 26.7
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 1.4e-07 62.0 60 53.3
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-07 61.6 153 31.4
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.9e-07 61.6 87 37.9
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 1.9e-07 61.6 258 26.4
BcaB04g17991 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-07 61.2 80 40.0
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 2.4e-07 61.2 61 52.5
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 2.4e-07 61.2 61 45.9
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 5.4e-07 60.1 49 57.1
C02p30800 Brassica napus HOM05D009238 ORTHO05D012489 5.4e-07 60.1 124 33.9
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 5.4e-07 60.1 219 27.4
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 5.4e-07 60.1 178 29.2
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 7.1e-07 59.7 64 53.1
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 7.1e-07 59.7 44 63.6
C03p31480 Brassica napus HOM05D009238 ORTHO05D021611 9.2e-07 59.3 97 38.1
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 9.2e-07 59.3 47 57.4
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-06 58.9 62 48.4
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 1.6e-06 58.5 60 43.3
BolC6t35474H Brassica oleracea HOM05D016295 ORTHO05D017554 1.6e-06 58.5 235 27.2
BcaC08g43076 Brassica carinata HOM05D016295 ORTHO05D017554 2.1e-06 58.2 228 26.3
BraA01t01668Z Brassica rapa HOM05D009238 ORTHO05D019868 2.1e-06 58.2 95 37.9
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 3.5e-06 57.4 48 58.3
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 3.5e-06 57.4 154 29.2
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 3.5e-06 57.4 69 42.0
BolC8t49470H Brassica oleracea HOM05D009238 ORTHO05D019868 4.6e-06 57.0 134 30.6
BcaC08g47032 Brassica carinata HOM05D009238 ORTHO05D012489 7.8e-06 56.2 188 33.0
BraA06t26451Z Brassica rapa HOM05D001307 ORTHO05D001158 7.8e-06 56.2 44 61.4


User provided reference genes

Program Settings