Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 1.7e-65 252.7 145 100.0
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 1.5e-45 186.4 148 70.9
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 5.3e-38 161.4 138 65.9
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 9.3e-35 150.6 156 56.4
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 5.1e-33 144.8 130 60.0
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 8.7e-33 144.1 163 57.7
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 2.1e-31 139.4 164 56.7
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 9.0e-30 134.0 163 53.4
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 5.8e-29 131.3 159 54.1
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 3.2e-27 125.6 164 50.6
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 5.5e-27 124.8 159 53.5
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 4.6e-26 121.7 156 54.5
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 1.3e-25 120.2 156 51.3
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 8.7e-25 117.5 159 54.1
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 5.3e-22 108.2 156 50.6
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 5.3e-22 108.2 156 50.6
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 2.6e-21 105.9 156 48.7
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 2.6e-21 105.9 156 48.7
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 4.5e-21 105.1 151 49.7
BolC5t34105H Brassica oleracea HOM05D001472 ORTHO05D007811 1.4e-19 100.1 141 50.4
BraA05t22411Z Brassica rapa HOM05D001472 ORTHO05D007811 1.2e-18 97.1 142 50.7
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 5.7e-16 88.2 142 41.5
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 4.8e-15 85.1 141 46.1
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 4.8e-15 85.1 144 38.2
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 4.8e-15 85.1 141 39.0
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 6.3e-15 84.7 141 41.1
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 6.3e-15 84.7 143 39.2
A03p38240 Brassica napus HOM05D001472 ORTHO05D007811 4.1e-14 82.0 133 48.9
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 9.0e-14 80.9 153 39.2
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 9.0e-14 80.9 141 42.6
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 9.0e-14 80.9 141 39.7
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 1.2e-13 80.5 141 39.7
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 1.5e-13 80.1 141 38.3
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 2.6e-13 79.3 142 39.4
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 2.6e-13 79.3 145 39.3
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 3.4e-13 79.0 143 39.9
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 5.9e-13 78.2 140 35.0
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 7.7e-13 77.8 144 38.2
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 1.0e-12 77.4 146 39.7
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 1.0e-12 77.4 142 40.1
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 1.0e-12 77.4 143 37.8
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 2.2e-12 76.3 142 36.6
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 2.9e-12 75.9 142 43.0
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 8.5e-12 74.3 146 37.7
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.4e-11 73.6 148 35.1
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 3.2e-11 72.4 143 35.0
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 3.2e-11 72.4 151 37.7
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 5.5e-11 71.6 141 36.2
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 7.2e-11 71.2 145 38.6
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 7.2e-11 71.2 147 38.8
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 1.6e-10 70.1 146 37.7
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 2.7e-10 69.3 57 59.6
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 4.6e-10 68.6 145 35.2
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 4.6e-10 68.6 144 34.7
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 7.9e-10 67.8 145 35.2
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 2.3e-09 66.2 144 33.3
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 3.9e-09 65.5 140 35.7
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.7e-09 64.7 143 34.3
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 1.1e-08 63.9 143 36.4
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 2.0e-08 63.2 140 35.7
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 2.0e-08 63.2 142 36.6
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 3.3e-08 62.4 142 31.7
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 3.3e-08 62.4 142 36.6
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 4.3e-08 62.0 147 34.7
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 4.3e-08 62.0 144 32.6
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 5.7e-08 61.6 141 35.5
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 5.7e-08 61.6 142 34.5
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 2.8e-07 59.3 142 35.2
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 3.7e-07 58.9 143 33.6
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 8.2e-07 57.8 145 33.1
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 8.2e-07 57.8 143 36.4
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 1.4e-06 57.0 142 30.3
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.8e-06 56.6 140 30.7
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 1.8e-06 56.6 143 35.7


User provided reference genes

Program Settings