Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p46320 Brassica napus HOM05D003079 ORTHO05D003461 1.9e-229 798.9 425 100.0
BcaC01g03997 Brassica carinata HOM05D003079 ORTHO05D003461 5.0e-222 774.2 421 96.4
BolC3t16901H Brassica oleracea HOM05D003079 ORTHO05D003461 5.2e-219 764.2 421 95.7
A03p38160 Brassica napus HOM05D003079 ORTHO05D003461 4.1e-208 728.0 421 92.2
BraA03t12969Z Brassica rapa HOM05D003079 ORTHO05D003461 4.1e-208 728.0 421 92.2
BcaB04g18754 Brassica carinata HOM05D003079 ORTHO05D003461 1.7e-169 599.7 423 79.4
Sp3g11560 Schrenkiella parvula HOM05D003079 ORTHO05D003461 7.9e-159 564.3 450 72.7
AL3G25210 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 5.0e-137 491.9 475 64.0
Thhalv10020643m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.6e-130 469.5 447 64.9
CARHR087980 Cardamine hirsuta HOM05D003079 ORTHO05D003461 2.2e-129 466.5 462 64.5
BcaB04g21010 Brassica carinata HOM05D003079 ORTHO05D003461 2.9e-129 466.1 428 66.4
C01p51720 Brassica napus HOM05D003079 ORTHO05D003461 1.6e-127 460.3 420 66.9
BolC1t05117H Brassica oleracea HOM05D003079 ORTHO05D003461 1.6e-127 460.3 420 67.1
BcaC09g48303 Brassica carinata HOM05D003079 ORTHO05D003461 4.7e-127 458.8 428 66.1
BraA01t04061Z Brassica rapa HOM05D003079 ORTHO05D003461 2.0e-125 453.4 417 67.1
A01p40240 Brassica napus HOM05D003079 ORTHO05D003461 9.7e-125 451.1 417 66.9
AT3G13360 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 3.1e-123 446.0 475 58.9
Carub.0003s1274 Capsella rubella HOM05D003079 ORTHO05D003461 6.8e-118 428.3 481 57.0
Aa31LG8G580 Aethionema arabicum HOM05D003079 ORTHO05D003461 2.5e-104 383.3 426 56.8
THA.LOC104815679 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 2.8e-71 273.5 454 45.8
THA.LOC104810573 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 2.4e-46 190.7 441 39.0
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 1.0e-33 148.7 551 31.4
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 6.7e-33 146.0 549 30.6
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.3e-32 143.3 547 30.7
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.3e-31 141.7 547 30.7
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.7e-31 141.4 547 30.7
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 4.8e-31 139.8 577 30.3
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 6.3e-31 139.4 572 29.5
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.1e-30 138.7 564 31.6
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 2.4e-30 137.5 481 31.8
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 6.9e-30 136.0 572 30.9
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 1.2e-29 135.2 460 29.8
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 7.7e-29 132.5 521 28.8
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.9e-28 130.6 555 30.1
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.0e-28 129.8 546 30.2
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 8.5e-28 129.0 550 28.9
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 1.4e-27 128.3 542 28.8
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 1.9e-27 127.9 455 29.2
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 1.9e-27 127.9 472 29.0
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 2.5e-27 127.5 465 31.2
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 2.1e-26 124.4 469 28.4
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 2.7e-26 124.0 462 29.9
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.7e-26 124.0 560 29.1
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 4.7e-26 123.2 556 28.2
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 6.1e-26 122.9 524 28.8
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 2.3e-25 120.9 549 29.9
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 3.0e-25 120.6 524 28.4
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.0e-25 120.6 550 28.2
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 8.8e-25 119.0 520 29.8
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 2.6e-24 117.5 450 29.8
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.3e-24 117.1 550 28.0
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 5.7e-24 116.3 503 27.8
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 1.3e-23 115.2 471 28.2
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 1.7e-23 114.8 552 29.3
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 1.7e-23 114.8 531 28.2
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.2e-23 114.4 547 28.9
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 2.2e-23 114.4 550 27.8
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 3.7e-23 113.6 551 27.9
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 4.8e-23 113.2 496 29.6
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 4.8e-23 113.2 531 28.1
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 4.8e-23 113.2 543 28.2
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 6.3e-23 112.8 440 27.5
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 6.3e-23 112.8 551 29.2
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 6.3e-23 112.8 551 29.2
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 8.2e-23 112.5 546 28.0
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 8.2e-23 112.5 551 29.2
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 1.4e-22 111.7 467 29.8
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 1.8e-22 111.3 440 27.3
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.8e-22 111.3 515 28.5
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 1.5e-21 108.2 452 30.8
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 3.5e-21 107.1 464 30.2
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.5e-21 106.7 542 29.0
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 7.7e-21 105.9 551 27.0
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 7.7e-21 105.9 558 28.0
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 1.0e-20 105.5 442 30.1
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.0e-20 105.5 445 29.2
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.7e-20 104.8 540 27.6
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.0e-20 103.2 563 26.1
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 6.5e-20 102.8 545 27.0
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 8.5e-20 102.4 575 27.0
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 8.5e-20 102.4 524 27.5
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 8.5e-20 102.4 535 28.0
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 1.9e-19 101.3 533 26.5
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.5e-19 100.9 453 27.6
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 3.2e-19 100.5 460 26.5
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 4.2e-19 100.1 453 27.6
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 5.5e-19 99.8 539 26.3
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 7.2e-19 99.4 460 26.3
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 7.2e-19 99.4 553 27.7
C03p63130 Brassica napus HOM05D003079 ORTHO05D003461 1.6e-18 98.2 67 77.6
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 2.7e-18 97.4 578 27.0
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 4.7e-18 96.7 553 25.3
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 6.1e-18 96.3 552 27.0
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 8.0e-18 95.9 540 27.4
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 8.0e-18 95.9 554 25.8
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.0e-17 95.5 548 25.2
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 1.4e-17 95.1 532 26.9
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 2.3e-17 94.4 440 26.1
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 2.3e-17 94.4 456 28.7
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.0e-17 94.0 578 25.4
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 5.2e-17 93.2 529 26.1
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.7e-17 92.8 553 27.3
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 8.8e-17 92.4 550 27.1
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 8.8e-17 92.4 563 27.0
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.5e-16 91.7 573 26.0
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 5.7e-16 89.7 550 26.5
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 1.3e-15 88.6 490 28.6
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.7e-15 88.2 451 29.9
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.7e-15 88.2 552 26.1
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 2.2e-15 87.8 502 27.7
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 2.2e-15 87.8 552 25.4
BcaC01g05490 Brassica carinata HOM05D041398 ORTHO05D032673 3.7e-15 87.0 73 68.5
BolC3t14974H Brassica oleracea HOM05D041398 ORTHO05D032673 3.7e-15 87.0 73 68.5
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 6.3e-15 86.3 542 26.6
C03p25880 Brassica napus HOM05D041398 ORTHO05D032673 1.1e-14 85.5 73 67.1
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 1.1e-14 85.5 381 29.9
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 2.4e-14 84.3 536 25.4
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 4.1e-14 83.6 551 26.5
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 4.1e-14 83.6 396 28.0
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 1.2e-13 82.0 510 25.7
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 1.2e-13 82.0 507 26.0
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 1.6e-13 81.6 580 26.2
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.0e-13 81.3 387 27.6
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 4.5e-13 80.1 558 26.0
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 1.3e-12 78.6 532 24.8
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.3e-12 78.6 543 26.7
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 3.8e-12 77.0 479 24.6
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 6.5e-12 76.3 540 26.1
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 6.5e-12 76.3 551 25.8
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 1.1e-11 75.5 533 26.3
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 1.1e-11 75.5 382 28.0
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 3.2e-11 73.9 301 30.2
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 3.2e-11 73.9 431 27.4
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 9.4e-11 72.4 363 28.1
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 6.1e-10 69.7 543 24.5
BcaC04g20138 Brassica carinata HOM05D003079 ORTHO05D003461 1.8e-09 68.2 162 33.3
BolC9t57600H Brassica oleracea HOM05D003079 ORTHO05D003461 1.8e-09 68.2 162 33.3
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 5.2e-09 66.6 255 25.9
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 6.8e-09 66.2 515 25.4
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.2e-08 65.5 470 23.8
CARHR269610 Cardamine hirsuta HOM05D003079 ORTHO05D003461 1.2e-08 65.5 177 30.5
BcaB08g35981 Brassica carinata HOM05D003079 ORTHO05D003461 1.5e-08 65.1 200 29.0
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.5e-08 65.1 215 32.1
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 2.0e-08 64.7 415 27.0
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 5.7e-08 63.2 504 25.4
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.7e-08 63.2 448 25.7
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 7.5e-08 62.8 486 25.3
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 7.5e-08 62.8 218 30.7
ECA236G4881 Erigeron canadensis HOM05D003079 ORTHO05D003461 1.7e-07 61.6 405 25.2
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.2e-07 61.2 393 26.5
A10p13440 Brassica napus HOM05D003079 ORTHO05D003461 2.8e-07 60.8 161 31.1
BraA10t43447Z Brassica rapa HOM05D003079 ORTHO05D003461 2.8e-07 60.8 161 31.1
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 4.8e-07 60.1 484 23.3
C09p47450 Brassica napus HOM05D003079 ORTHO05D003461 6.3e-07 59.7 163 31.3
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 6.3e-07 59.7 459 24.0
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.4e-06 57.8 286 28.3
Lsat_1_v5_gn_7_115521 Lactuca sativa HOM05D003079 ORTHO05D003461 2.4e-06 57.8 379 25.1
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 3.1e-06 57.4 517 22.8
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 3.1e-06 57.4 323 27.2
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 7.0e-06 56.2 257 26.8


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