Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.9e-183 646.0 391 100.0
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 3.6e-158 562.0 399 91.2
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 2.1e-137 493.0 304 100.0
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 1.1e-117 427.6 311 88.4
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 9.3e-114 414.5 312 84.0
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 3.8e-107 392.5 367 71.1
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 2.3e-104 383.3 337 80.4
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 1.1e-101 374.4 315 75.2
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 8.4e-99 364.8 307 76.2
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 3.5e-97 359.4 305 80.0
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 1.0e-96 357.8 324 71.6
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 6.7e-96 355.1 311 72.7
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 1.9e-95 353.6 320 74.1
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 1.9e-95 353.6 307 75.9
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 4.8e-94 349.0 325 70.8
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 3.7e-86 322.8 298 73.2
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.5e-79 300.8 337 58.5
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 6.3e-78 295.4 306 65.0
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 1.7e-75 287.3 313 62.3
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.4e-72 277.7 320 59.7
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.0e-72 276.6 318 62.9
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.3e-70 271.2 315 57.5
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 2.2e-70 270.4 323 53.6
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.2e-70 270.4 323 53.6
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 2.2e-70 270.4 319 54.5
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 7.0e-69 265.4 304 66.1
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 7.0e-69 265.4 327 55.7
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.2e-68 264.6 318 57.2
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.2e-68 264.6 318 57.2
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 2.0e-68 263.8 304 59.5
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 5.9e-68 262.3 307 61.2
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 7.7e-68 261.9 313 58.5
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.3e-67 261.2 325 55.7
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 3.8e-67 259.6 321 57.0
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 1.1e-66 258.1 311 60.8
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 1.9e-66 257.3 311 60.8
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.9e-66 257.3 306 59.8
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 3.2e-66 256.5 346 55.8
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.6e-65 253.1 316 53.8
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 4.7e-65 252.7 331 49.5
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 1.0e-64 251.5 288 61.8
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.4e-64 251.1 319 55.8
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 2.3e-64 250.4 306 57.8
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 3.0e-64 250.0 317 61.5
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 5.2e-64 249.2 315 57.5
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 6.8e-64 248.8 319 58.3
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 8.8e-64 248.4 303 59.7
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 8.8e-64 248.4 314 59.6
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 1.5e-63 247.7 319 58.0
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 2.6e-63 246.9 288 54.5
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.6e-63 246.9 323 55.4
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 2.6e-63 246.9 301 55.8
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 3.4e-63 246.5 328 57.6
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 5.7e-63 245.7 323 52.9
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 5.7e-63 245.7 326 56.1
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 7.5e-63 245.4 311 54.3
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 2.8e-62 243.4 316 56.0
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 2.8e-62 243.4 333 52.3
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 6.3e-62 242.3 310 59.7
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 6.3e-62 242.3 326 55.2
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 8.3e-62 241.9 304 57.2
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 8.3e-62 241.9 325 51.7
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 1.1e-61 241.5 305 54.4
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 1.1e-61 241.5 323 52.9
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-61 241.5 320 58.4
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-61 241.5 320 58.4
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 1.1e-61 241.5 317 53.6
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 1.4e-61 241.1 347 52.7
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 1.4e-61 241.1 317 54.3
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 2.4e-61 240.4 306 55.9
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 3.1e-61 240.0 308 58.8
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 4.1e-61 239.6 320 55.6
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 5.4e-61 239.2 320 55.6
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 9.1e-61 238.4 307 57.3
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 9.1e-61 238.4 322 58.1
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 2.7e-60 236.9 313 57.8
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 3.5e-60 236.5 331 55.6
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 4.5e-60 236.1 309 52.4
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 1.0e-59 235.0 322 52.8
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.3e-59 234.6 319 58.0
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.3e-59 234.6 308 56.5
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 2.2e-59 233.8 309 60.8
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 2.2e-59 233.8 256 62.9
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 2.2e-59 233.8 331 54.7
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 2.2e-59 233.8 325 53.5
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 5.0e-59 232.6 320 61.2
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 8.5e-59 231.9 316 53.8
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.9e-58 230.7 307 55.7
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.5e-58 230.3 312 52.9
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 3.2e-58 229.9 304 59.5
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.5e-58 229.2 305 57.0
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 5.5e-58 229.2 318 55.3
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 1.6e-57 227.6 326 56.7
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 2.7e-57 226.9 306 52.9
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 3.6e-57 226.5 340 52.6
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 3.6e-57 226.5 334 51.2
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 6.1e-57 225.7 316 54.7
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 6.1e-57 225.7 332 52.1
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 6.1e-57 225.7 302 59.6
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 8.0e-57 225.3 306 58.2
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 8.0e-57 225.3 334 50.9
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.0e-56 224.9 320 54.4
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 1.4e-56 224.6 309 59.5
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.4e-56 224.6 317 55.5
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 2.3e-56 223.8 367 48.0
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 2.3e-56 223.8 307 56.4
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 4.0e-56 223.0 328 55.2
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 4.0e-56 223.0 309 56.3
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 8.8e-56 221.9 315 53.7
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 3.4e-55 219.9 317 50.8
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 4.4e-55 219.5 317 53.9
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 1.7e-54 217.6 136 81.6
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 2.2e-54 217.2 316 49.4
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 2.2e-54 217.2 330 51.2
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 3.7e-54 216.5 325 52.3
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-53 214.5 312 50.3
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-53 214.5 312 50.3
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 3.1e-53 213.4 329 52.9
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 4.1e-53 213.0 327 47.7
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 3.5e-52 209.9 316 52.8
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 4.5e-52 209.5 301 53.2
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 2.3e-51 207.2 353 51.0
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 3.8e-51 206.5 334 52.4
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.9e-50 204.1 303 55.1
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 3.3e-50 203.4 326 51.5
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 7.3e-50 202.2 308 52.3
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 9.5e-50 201.8 330 45.5
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.8e-48 197.6 326 49.4
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 2.3e-48 197.2 302 51.7
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 5.2e-48 196.1 136 71.3
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 2.0e-47 194.1 329 47.4
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 7.5e-47 192.2 412 43.2
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 9.8e-47 191.8 314 57.0
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 1.3e-46 191.4 276 51.1
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.8e-45 187.6 297 53.5
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 2.4e-45 187.2 310 46.8
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 1.6e-44 184.5 299 50.8
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.3e-43 180.6 206 58.7
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 3.9e-43 179.9 316 47.2
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 4.3e-42 176.4 133 70.7
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 7.3e-42 175.6 323 45.8
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.2e-41 174.9 132 65.9
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.6e-41 173.3 133 69.2
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.2e-38 164.1 314 38.5
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 3.7e-38 163.3 243 48.6
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.6e-36 157.9 303 46.5
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 1.6e-36 157.9 105 75.2
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.0e-36 157.5 329 42.9
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.3e-35 154.8 220 63.6
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 1.9e-34 151.0 299 48.5
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 1.6e-33 147.9 254 53.9
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.1e-32 145.2 295 41.7
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 2.4e-29 134.0 344 40.7
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.2e-29 133.7 76 88.2
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 7.1e-29 132.5 328 47.9
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 4.6e-28 129.8 325 41.5
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 7.3e-26 122.5 106 61.3
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 5.8e-23 112.8 340 40.3
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 7.6e-23 112.5 314 42.0
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.9e-22 110.5 130 52.3
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 1.6e-20 104.8 205 44.9
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 4.6e-20 103.2 147 57.1
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 8.1e-17 92.4 85 60.0
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 1.8e-16 91.3 81 53.1
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 4.0e-16 90.1 90 52.2
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 5.8e-15 86.3 157 54.8
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 2.2e-14 84.3 86 57.0
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 3.8e-14 83.6 64 57.8
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 9.3e-13 79.0 85 55.3
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.5e-12 77.0 188 38.8
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 8.7e-11 72.4 82 50.0
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 4.3e-10 70.1 88 48.9
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 9.6e-10 68.9 78 56.4
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.6e-09 68.2 115 45.2
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 8.1e-09 65.9 57 54.4
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 1.5e-07 61.6 320 26.2


User provided reference genes

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