Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p42030 Brassica napus HOM05D000007 ORTHO05D000017 5.0e-69 264.2 125 100.0
A03p34560 Brassica napus HOM05D000007 ORTHO05D000017 5.2e-26 121.3 61 88.5
Sp3g05160 Schrenkiella parvula HOM05D000007 ORTHO05D000017 6.4e-24 114.4 88 61.4
AT3G06240 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 4.1e-23 111.7 86 55.8
AL3G17100 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.3e-21 106.7 86 55.8
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 1.7e-21 106.3 86 57.0
Carub.0003s0567 Capsella rubella HOM05D000007 ORTHO05D000017 1.7e-21 106.3 86 55.8
CARHR080760 Cardamine hirsuta HOM05D000007 ORTHO05D000017 3.9e-21 105.1 86 55.8
Thhalv10020779m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 3.9e-21 105.1 88 55.7
BcaB03g14663 Brassica carinata HOM05D000007 ORTHO05D000017 6.6e-21 104.4 86 58.1
BolC3t16484H Brassica oleracea HOM05D000007 ORTHO05D000017 3.3e-20 102.1 86 59.3
C03p42040 Brassica napus HOM05D000007 ORTHO05D000017 2.8e-19 99.0 86 58.1
BcaC01g04329 Brassica carinata HOM05D000007 ORTHO05D000017 4.7e-19 98.2 86 58.1
THA.LOC104799786 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 8.0e-19 97.4 76 56.6
A03p34570 Brassica napus HOM05D000007 ORTHO05D000017 6.8e-18 94.4 87 56.3
BraA03t12634Z Brassica rapa HOM05D000007 ORTHO05D000017 6.8e-18 94.4 87 56.3
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.4e-15 86.7 75 52.0
BcaB03g14658 Brassica carinata HOM05D000007 ORTHO05D000017 2.4e-15 85.9 55 72.7
THA.LOC104818825 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 3.5e-14 82.0 77 46.8
THA.LOC104818784 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.7e-13 79.7 90 44.4
THA.LOC104818815 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.7e-13 79.7 78 47.4
THA.LOC104818818 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.7e-13 79.7 88 45.5
THA.LOC104818822 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.7e-13 79.7 87 42.5
THA.LOC104818817 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 8.6e-13 77.4 90 43.3
THA.LOC104818785 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 3.3e-12 75.5 84 44.0
THA.LOC104818816 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.6e-11 73.2 84 46.4
THA.LOC104820108 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.1e-11 72.8 75 46.7
THA.LOC104818824 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 6.2e-11 71.2 102 35.3
BcaB01g03790 Brassica carinata HOM05D000007 ORTHO05D000017 4.4e-09 65.1 93 41.9
AL7G42560 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 3.7e-08 62.0 80 38.8
A03p20440 Brassica napus HOM05D000007 ORTHO05D000017 3.7e-08 62.0 55 52.7
BraA03t11287Z Brassica rapa HOM05D000007 ORTHO05D000017 3.7e-08 62.0 55 52.7
THA.LOC104820109 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 8.3e-08 60.8 63 47.6
PSO210G6752 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-07 59.3 83 36.1
THA.LOC104818813 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.4e-07 59.3 75 40.0
Gohir.A09G060100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.1e-07 57.8 75 38.7
COL.COLO4_13989 Corchorus olitorius HOM05D000007 ORTHO05D000017 9.2e-07 57.4 100 36.0
Duzib151G0963 Durio zibethinus HOM05D000007 ORTHO05D000017 1.2e-06 57.0 95 33.7
Lsat_1_v5_gn_5_137121 Lactuca sativa HOM05D000007 ORTHO05D000039 1.6e-06 56.6 71 35.2
BcaC01g05632 Brassica carinata HOM05D000007 ORTHO05D000017 2.7e-06 55.8 59 44.1
Gorai.006G073900 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.7e-06 55.8 75 37.3
BolC3t14794H Brassica oleracea HOM05D000007 ORTHO05D000017 4.6e-06 55.1 54 46.3
Cpa.g.sc16.53 Carica papaya HOM05D000007 ORTHO05D000017 6.0e-06 54.7 85 32.9


User provided reference genes

Program Settings