Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p40580 Brassica napus HOM05D001733 ORTHO05D001882 4.3e-124 448.0 220 100.0
BcaC01g04396 Brassica carinata HOM05D001733 ORTHO05D001882 2.1e-123 445.7 220 99.5
BolC3t16323H Brassica oleracea HOM05D001733 ORTHO05D001882 2.1e-123 445.7 220 99.5
BraA03t12505Z Brassica rapa HOM05D001733 ORTHO05D001882 5.8e-121 437.6 220 97.3
A03p33340 Brassica napus HOM05D001733 ORTHO05D001882 9.8e-121 436.8 221 98.2
Carub.0003s0276 Capsella rubella HOM05D001733 ORTHO05D001882 4.1e-119 431.4 220 94.5
AL3G13370 Arabidopsis lyrata HOM05D001733 ORTHO05D001882 9.2e-119 430.3 220 94.1
AT3G03600 Arabidopsis thaliana HOM05D001733 ORTHO05D001882 3.0e-117 425.2 220 92.7
Thhalv10021487m.g Eutrema salsugineum HOM05D001733 ORTHO05D001882 3.0e-117 425.2 220 93.6
Sp3g02590 Schrenkiella parvula HOM05D001733 ORTHO05D001882 6.6e-117 424.1 220 92.3
CARHR077640 Cardamine hirsuta HOM05D001733 ORTHO05D001882 1.9e-116 422.5 220 92.7
C05p63290 Brassica napus HOM05D001733 ORTHO05D001882 4.4e-113 411.4 208 96.6
BolC5t34992H Brassica oleracea HOM05D001733 ORTHO05D001882 1.3e-112 409.8 208 96.2
BcaC05g29865 Brassica carinata HOM05D001733 ORTHO05D001882 3.7e-112 408.3 220 92.3
BcaC05g30264 Brassica carinata HOM05D001733 ORTHO05D001882 8.4e-112 407.1 218 91.7
A05p43710 Brassica napus HOM05D001733 ORTHO05D001882 7.1e-111 404.1 205 96.1
BraA05t23110Z Brassica rapa HOM05D001733 ORTHO05D001882 1.0e-109 400.2 205 95.6
Aa31LG5G14110 Aethionema arabicum HOM05D001733 ORTHO05D001882 5.6e-108 394.4 212 89.2
THA.LOC104820811 Tarenaya hassleriana HOM05D001733 ORTHO05D001882 1.1e-100 370.2 212 83.0
BcaB04g19363 Brassica carinata HOM05D001733 ORTHO05D001882 7.6e-97 357.5 221 82.8
Cpa.g.sc73.32 Carica papaya HOM05D001733 ORTHO05D001882 2.5e-76 289.3 208 66.3
MD02G1230600 Malus domestica HOM05D001733 ORTHO05D001882 6.9e-74 281.2 204 66.2
Ciclev10023278m.g Citrus clementina HOM05D001733 ORTHO05D001882 4.5e-73 278.5 211 64.9
Eucgr.D01117 Eucalyptus grandis HOM05D001733 ORTHO05D001882 7.6e-73 277.7 204 68.6
Lj1g0025923 Lotus japonicus HOM05D001733 ORTHO05D001882 1.1e-71 273.9 207 64.7
Cfa003706 Carpinus fangiana HOM05D001733 ORTHO05D001882 5.5e-71 271.6 204 65.2
Haze_15782 Corylus avellana HOM05D001733 ORTHO05D001882 5.5e-71 271.6 204 64.7
TWI39G0742 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 1.6e-70 270.0 209 62.7
Sabra13G0060700 Salix brachista HOM05D001733 ORTHO05D001882 2.1e-70 269.6 219 60.7
Prupe.2G107500 Prunus persica HOM05D001733 ORTHO05D001882 2.7e-70 269.2 218 60.6
PGR044G0034 Punica granatum HOM05D001733 ORTHO05D001882 7.9e-70 267.7 203 65.5
CiPaw.02G047900 Carya illinoinensis HOM05D001733 ORTHO05D001882 1.0e-69 267.3 204 63.2
Manes.08G156000 Manihot esculenta HOM05D001733 ORTHO05D001882 1.0e-69 267.3 204 64.7
Atru.chr9.238 Acer truncatum HOM05D001733 ORTHO05D001882 1.3e-69 266.9 203 62.6
RcHm_v2.0_Chr1g0341081 Rosa chinensis HOM05D001733 ORTHO05D001882 5.1e-69 265.0 205 62.4
Cc02_g26570 Coffea canephora HOM05D001733 ORTHO05D001882 8.7e-69 264.2 211 62.1
TWI73G0070 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 8.7e-69 264.2 215 59.5
Lsat_1_v5_gn_7_34060 Lactuca sativa HOM05D001733 ORTHO05D001882 1.1e-68 263.8 208 63.5
QL08p048200 Quercus lobata HOM05D001733 ORTHO05D001882 4.3e-68 261.9 207 62.3
Sed0021856 Sechium edule HOM05D001733 ORTHO05D001882 5.7e-68 261.5 220 59.1
Gorai.007G250600 Gossypium raimondii HOM05D001733 ORTHO05D001882 7.4e-68 261.2 217 57.6
Potri.013G070001 Populus trichocarpa HOM05D001733 ORTHO05D001882 7.4e-68 261.2 219 59.8
Lalb_Chr23g0264941 Lupinus albus HOM05D001733 ORTHO05D001882 9.7e-68 260.8 202 61.4
Gohir.D11G237300 Gossypium hirsutum HOM05D001733 ORTHO05D001882 1.3e-67 260.4 217 57.6
Psat5g001280 Pisum sativum HOM05D001733 ORTHO05D001882 1.3e-67 260.4 207 60.4
Gohir.A11G224218 Gossypium hirsutum HOM05D001733 ORTHO05D001882 1.6e-67 260.0 217 58.1
Ca_15286_v3 Cicer arietinum L. HOM05D001733 ORTHO05D001882 2.2e-67 259.6 212 58.0
Ca_15422_v3 Cicer arietinum L. HOM05D001733 ORTHO05D001882 2.2e-67 259.6 212 58.0
FAN03G0842 Fragaria x ananassa HOM05D001733 ORTHO05D001882 2.8e-67 259.2 206 61.7
FvH4_7g08140 Fragaria vesca HOM05D001733 ORTHO05D001882 3.7e-67 258.8 206 61.7
FAN01G0027 Fragaria x ananassa HOM05D001733 ORTHO05D001882 3.7e-67 258.8 206 61.7
FAN06G0601 Fragaria x ananassa HOM05D001733 ORTHO05D001882 3.7e-67 258.8 206 61.7
ClCG08G014080 Citrullus lanatus HOM05D001733 ORTHO05D001882 6.3e-67 258.1 203 60.6
FAN10G0402 Fragaria x ananassa HOM05D001733 ORTHO05D001882 6.3e-67 258.1 206 61.2
Hund19368 Selenicereus undatus HOM05D001733 ORTHO05D001882 6.3e-67 258.1 215 59.1
CANSAT78G1742 Cannabis sativa HOM05D001733 ORTHO05D001882 8.2e-67 257.7 198 62.6
HanXRQChr04g0117601 Helianthus annuus HOM05D001733 ORTHO05D001882 1.8e-66 256.5 217 59.0
Dinv43956 Davidia involucrata HOM05D001733 ORTHO05D001882 4.1e-66 255.4 208 62.0
Lj7P561T30 Lonicera japonica HOM05D001733 ORTHO05D001882 5.3e-66 255.0 204 60.8
Phvul.009G117800 Phaseolus vulgaris HOM05D001733 ORTHO05D001882 5.3e-66 255.0 202 62.4
CSS0001376 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 9.0e-66 254.2 202 62.9
CSS0011354 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 9.0e-66 254.2 202 62.9
VMungo1309G3105 Vigna mungo HOM05D001733 ORTHO05D001882 9.0e-66 254.2 202 61.4
DCAR_029572 Daucus carota HOM05D001733 ORTHO05D001882 1.2e-65 253.8 206 60.2
Medtr3g118200 Medicago truncatula HOM05D001733 ORTHO05D001882 1.2e-65 253.8 199 61.8
Solyc01g081520.3 Solanum lycopersicum HOM05D001733 ORTHO05D001882 3.4e-65 252.3 208 59.6
Sopen01g033080 Solanum pennellii HOM05D001733 ORTHO05D001882 3.4e-65 252.3 208 59.6
PGSC0003DMG401031123 Solanum tuberosum HOM05D001733 ORTHO05D001882 4.5e-65 251.9 203 60.6
Glyma.06G001900 Glycine max HOM05D001733 ORTHO05D001882 5.9e-65 251.5 216 57.4
CsaV3_2G024360 Cucumis sativus L. HOM05D001733 ORTHO05D001882 7.7e-65 251.1 203 60.6
Thecc.05G236000 Theobroma cacao HOM05D001733 ORTHO05D001882 7.7e-65 251.1 211 57.3
Nitab4.5_0000792g0200 Nicotiana tabacum HOM05D001733 ORTHO05D001882 2.9e-64 249.2 203 60.6
arahy.Tifrunner.gnm1.ann1.A8CT9J Arachis hypogaea HOM05D001733 ORTHO05D001882 3.8e-64 248.8 219 55.7
Duzib106G0611 Durio zibethinus HOM05D001733 ORTHO05D001882 3.8e-64 248.8 211 58.3
AUR62020701 Chenopodium quinoa HOM05D001733 ORTHO05D001882 6.5e-64 248.1 212 57.1
MELO3C011346.2 Cucumis melo HOM05D001733 ORTHO05D001882 6.5e-64 248.1 203 58.1
AUR62028023 Chenopodium quinoa HOM05D001733 ORTHO05D001882 2.5e-63 246.1 212 56.6
Nitab4.5_0007787g0030 Nicotiana tabacum HOM05D001733 ORTHO05D001882 2.5e-63 246.1 208 58.7
TAR362G0336 Trochodendron aralioides HOM05D001733 ORTHO05D001882 3.2e-63 245.7 200 60.0
vmacro15942 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 4.2e-63 245.4 219 57.1
Sc06g0001410 Simmondsia chinensis HOM05D001733 ORTHO05D001882 4.6e-62 241.9 206 56.3
EL10Ac2g03646 Beta vulgaris HOM05D001733 ORTHO05D001882 6.1e-62 241.5 212 53.8
Oeu060721.2 Olea europaea HOM05D001733 ORTHO05D001882 3.0e-61 239.2 202 58.4
Aqoxy7G03741 Aquilegia oxysepala HOM05D001733 ORTHO05D001882 1.1e-60 237.3 203 59.1
MSTRG.20625 Avicennia marina HOM05D001733 ORTHO05D001882 2.6e-60 236.1 208 56.7
ECA236G4258 Erigeron canadensis HOM05D000200 ORTHO05D000262 3.3e-60 235.7 191 62.3
COL.COLO4_21825 Corchorus olitorius HOM05D001733 ORTHO05D001882 4.4e-60 235.3 214 51.4
Migut.B01416 Erythranthe guttata HOM05D001733 ORTHO05D001882 4.8e-59 231.9 203 53.7
SGA_v2.0_scaffold98G29368 Striga asiatica HOM05D001733 ORTHO05D001882 8.2e-59 231.1 210 54.3
unitig_0.g1363 Utricularia gibba HOM05D001733 ORTHO05D001882 6.9e-58 228.0 213 52.1
Rhsim07G0048200 Rhododendron simsii HOM05D001733 ORTHO05D001882 9.1e-58 227.6 202 56.4
SalBow5G0061 Salvia bowleyana HOM05D001733 ORTHO05D001882 3.4e-57 225.7 214 51.4
Actinidia26430 Actinidia chinensis HOM05D001733 ORTHO05D001882 1.3e-51 207.2 173 59.0
Cc08_g05780 Coffea canephora HOM05D001733 ORTHO05D001882 8.5e-48 194.5 174 58.6
Cc05_g05120 Coffea canephora HOM05D001733 ORTHO05D001882 1.1e-47 194.1 174 58.6
Nn044s41810 Nelumbo nucifera HOM05D001733 ORTHO05D001882 1.2e-46 190.7 200 49.0
Nn1g10086 Nelumbo nucifera HOM05D001733 ORTHO05D001882 1.2e-46 190.7 200 49.0
Ah.13g073670 Amaranthus hybridus HOM05D001733 ORTHO05D001882 2.1e-46 189.9 167 56.3
RcHm_v2.0_Chr1g0383121 Rosa chinensis HOM05D001733 ORTHO05D001882 2.0e-44 183.3 191 51.8
vmacro13603 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 1.3e-43 180.6 203 47.8
SEGI_38852 Sequoiadendron giganteum HOM05D001733 ORTHO05D001882 2.4e-42 176.4 210 43.3
RcHm_v2.0_Chr2g0085551 Rosa chinensis HOM05D001733 ORTHO05D001882 3.1e-42 176.0 137 62.8
RcHm_v2.0_Chr1g0363821 Rosa chinensis HOM05D001733 ORTHO05D001882 2.7e-38 162.9 142 57.7
TPR.G38482 Trifolium pratense HOM05D001733 ORTHO05D001882 3.6e-38 162.5 212 44.3
RcHm_v2.0_Chr5g0027611 Rosa chinensis HOM05D001733 ORTHO05D001882 1.8e-37 160.2 105 67.6
RcHm_v2.0_Chr3g0481141 Rosa chinensis HOM05D001733 ORTHO05D001882 5.2e-37 158.7 141 55.3
RcHm_v2.0_Chr6g0246101 Rosa chinensis HOM05D001733 ORTHO05D001882 5.9e-33 145.2 105 62.9
CAN.G1249.13 Capsicum annuum HOM05D001733 ORTHO05D001882 2.2e-32 143.3 113 59.3
arahy.Tifrunner.gnm1.ann1.VEWU5V Arachis hypogaea HOM05D001733 ORTHO05D001882 9.5e-31 137.9 115 58.3
AagrBONN_evm.TU.Sc2ySwM_228.194 Anthoceros agrestis HOM05D001733 ORTHO05D001882 1.2e-30 137.5 222 33.8
HanXRQChr16g0501591 Helianthus annuus HOM05D001733 ORTHO05D001882 1.8e-26 123.6 103 59.2
RcHm_v2.0_Chr5g0054321 Rosa chinensis HOM05D001733 ORTHO05D001882 5.4e-26 122.1 106 54.7
Peaxi162Scf01260g00014 Petunia axillaris HOM05D001733 ORTHO05D001882 4.5e-25 119.0 88 63.6
BcaC02g09516 Brassica carinata HOM05D001733 ORTHO05D001882 5.6e-23 112.1 91 70.3
A01p19710 Brassica napus HOM05D001733 ORTHO05D001882 2.0e-20 103.6 56 91.1
C04p32130 Brassica napus HOM05D001733 ORTHO05D001882 2.0e-20 103.6 52 98.1
C04p54460 Brassica napus HOM05D001733 ORTHO05D001882 3.4e-20 102.8 53 96.2
BolC4t25944H Brassica oleracea HOM05D001733 ORTHO05D001882 4.4e-20 102.4 52 96.2
C03p74560 Brassica napus HOM05D001733 ORTHO05D001882 1.3e-19 100.9 52 94.2
Zm00001eb385930 Zea mays HOM05D022646 ORTHO05D001882 9.2e-18 94.7 96 51.0
Zm00001eb436200 Zea mays HOM05D022646 ORTHO05D001882 9.2e-18 94.7 96 51.0
Zm00001eb436250 Zea mays HOM05D022646 ORTHO05D001882 9.2e-18 94.7 96 51.0
Zm00001eb436290 Zea mays HOM05D022646 ORTHO05D001882 9.2e-18 94.7 96 51.0
Zm00001eb436330 Zea mays HOM05D022646 ORTHO05D001882 9.2e-18 94.7 96 51.0
arahy.Tifrunner.gnm1.ann1.3YR680 Arachis hypogaea HOM05D001733 ORTHO05D001882 8.6e-16 88.2 70 57.1
RcHm_v2.0_Chr5g0036111 Rosa chinensis HOM05D001733 ORTHO05D001882 1.1e-15 87.8 140 37.1
arahy.Tifrunner.gnm1.ann1.BIR89S Arachis hypogaea HOM05D001903 ORTHO05D001847 1.0e-08 64.7 93 41.9
Gorai.008G076300 Gossypium raimondii HOM05D001733 ORTHO05D047820 5.0e-08 62.4 50 54.0
Gohir.D12G069601 Gossypium hirsutum HOM05D001733 ORTHO05D047820 1.5e-07 60.8 50 52.0
Mapoly0051s0114 Marchantia polymorpha HOM05D052641 ORTHO05D001882 7.3e-07 58.5 74 43.2
ATR0660G006 Amborella trichopoda HOM05D001733 ORTHO05D001882 2.8e-06 56.6 47 51.1


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