Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p40480 Brassica napus HOM05D003592 ORTHO05D004208 1.8e-60 235.7 119 100.0
BolC3t16311H Brassica oleracea HOM05D003592 ORTHO05D004208 1.8e-60 235.7 119 100.0
A03p33220 Brassica napus HOM05D003592 ORTHO05D004208 1.2e-59 233.0 119 98.3
BraA03t12494Z Brassica rapa HOM05D003592 ORTHO05D004208 1.5e-59 232.6 119 97.5
BcaC01g04411 Brassica carinata HOM05D003592 ORTHO05D004208 2.2e-58 228.8 119 98.3
BcaB04g19374 Brassica carinata HOM05D003592 ORTHO05D004208 1.4e-52 209.5 119 89.9
Sp3g02190 Schrenkiella parvula HOM05D003592 ORTHO05D004208 1.6e-48 196.1 123 82.1
AL3G12760 Arabidopsis lyrata HOM05D003592 ORTHO05D004208 8.7e-47 190.3 121 82.6
Aa31LG5G13630 Aethionema arabicum HOM05D003592 ORTHO05D004208 2.5e-46 188.7 125 76.8
CARHR077170 Cardamine hirsuta HOM05D003592 ORTHO05D004208 2.5e-46 188.7 125 77.6
C05p63660 Brassica napus HOM05D003592 ORTHO05D004208 4.0e-44 181.4 121 79.3
BolC5t35035H Brassica oleracea HOM05D003592 ORTHO05D004208 4.0e-44 181.4 120 78.3
Thhalv10021768m.g Eutrema salsugineum HOM05D003592 ORTHO05D004208 6.9e-44 180.6 126 74.6
AT3G03150 Arabidopsis thaliana HOM05D003592 ORTHO05D004208 1.2e-43 179.9 119 79.0
BcaC05g30524 Brassica carinata HOM05D003592 ORTHO05D004208 2.0e-43 179.1 122 77.0
A05p44040 Brassica napus HOM05D003592 ORTHO05D004208 7.6e-43 177.2 120 75.8
BraSC90t46707Z Brassica rapa HOM05D003592 ORTHO05D004208 7.6e-43 177.2 120 75.8
Carub.0003s0230 Capsella rubella HOM05D003592 ORTHO05D004208 4.6e-40 167.9 120 74.2
AT5G17165 Arabidopsis thaliana HOM05D003592 ORTHO05D004208 1.3e-29 133.3 118 56.8
BcaB08g36801 Brassica carinata HOM05D003592 ORTHO05D004208 1.3e-29 133.3 123 57.7
AL6G28210 Arabidopsis lyrata HOM05D003592 ORTHO05D004208 3.1e-28 128.6 122 55.7
CARHR196060 Cardamine hirsuta HOM05D003592 ORTHO05D004208 5.3e-28 127.9 124 54.0
BcaC04g18828 Brassica carinata HOM05D003592 ORTHO05D004208 3.4e-27 125.2 130 53.8
BolC9t58839H Brassica oleracea HOM05D003592 ORTHO05D004208 3.4e-27 125.2 130 53.8
Sp6g27060 Schrenkiella parvula HOM05D003592 ORTHO05D004208 5.8e-27 124.4 122 54.9
THA.LOC104827220 Tarenaya hassleriana HOM05D003592 ORTHO05D004208 5.8e-27 124.4 127 55.1
A10p22230 Brassica napus HOM05D003592 ORTHO05D004208 1.7e-26 122.9 130 53.1
BraA10t44282Z Brassica rapa HOM05D003592 ORTHO05D004208 1.7e-26 122.9 130 53.1
Carub.0006s1535 Capsella rubella HOM05D003592 ORTHO05D004208 1.1e-25 120.2 120 52.5
TWI32G0722 Tripterygium wilfordii HOM05D003592 ORTHO05D004208 6.1e-24 114.4 117 46.2
Atru.chr12.2033 Acer truncatum HOM05D003592 ORTHO05D004208 2.3e-23 112.5 126 47.6
Manes.08G164900 Manihot esculenta HOM05D003592 ORTHO05D004208 2.3e-23 112.5 130 49.2
Ciclev10013115m.g Citrus clementina HOM05D003592 ORTHO05D004208 6.7e-23 110.9 127 48.8
COL.COLO4_08909 Corchorus olitorius HOM05D003592 ORTHO05D004208 7.4e-22 107.5 129 46.5
Potri.013G081700 Populus trichocarpa HOM05D003592 ORTHO05D004208 9.7e-22 107.1 117 48.7
Thecc.05G207700 Theobroma cacao HOM05D003592 ORTHO05D004208 1.3e-21 106.7 99 54.5
MELO3C017620.2 Cucumis melo HOM05D003592 ORTHO05D004208 2.2e-21 105.9 132 47.0
TWI34G2026 Tripterygium wilfordii HOM05D003592 ORTHO05D004208 3.7e-21 105.1 126 47.6
Manes.09G123900 Manihot esculenta HOM05D003592 ORTHO05D004208 4.8e-21 104.8 128 46.9
CsaV3_4G004470 Cucumis sativus L. HOM05D003592 ORTHO05D004208 6.3e-21 104.4 131 45.0
Gorai.003G051000 Gossypium raimondii HOM05D003592 ORTHO05D004208 6.3e-21 104.4 125 45.6
Ca_24466_v3 Cicer arietinum L. HOM05D003592 ORTHO05D004208 8.2e-21 104.0 124 48.4
Duzib106G0206 Durio zibethinus HOM05D003592 ORTHO05D004208 8.2e-21 104.0 137 46.7
C09p60040 Brassica napus HOM05D003592 ORTHO05D004208 1.1e-20 103.6 118 50.8
Gohir.D03G049600 Gossypium hirsutum HOM05D003592 ORTHO05D004208 1.1e-20 103.6 125 45.6
Gohir.A02G139000 Gossypium hirsutum HOM05D003592 ORTHO05D004208 1.4e-20 103.2 125 45.6
Duzib177G0010 Durio zibethinus HOM05D003592 ORTHO05D004208 4.1e-20 101.7 136 45.6
Sabra13G0071400 Salix brachista HOM05D003592 ORTHO05D004208 4.1e-20 101.7 101 49.5
TPR.G37953 Trifolium pratense HOM05D003592 ORTHO05D004208 5.3e-20 101.3 110 52.7
Cpa.g.sc39.41 Carica papaya HOM05D003592 ORTHO05D004208 9.0e-20 100.5 86 55.8
CANSAT21G0974 Cannabis sativa HOM05D003592 ORTHO05D004208 2.0e-19 99.4 125 45.6
Eucgr.L03660 Eucalyptus grandis HOM05D003592 ORTHO05D004208 2.0e-19 99.4 116 46.6
GSVIVG01024455001 Vitis vinifera HOM05D003592 ORTHO05D004208 2.0e-19 99.4 120 45.8
Eucgr.A02954 Eucalyptus grandis HOM05D003592 ORTHO05D004208 3.4e-19 98.6 117 46.2
Sed0022386 Sechium edule HOM05D003592 ORTHO05D004208 5.9e-19 97.8 123 46.3
Glyma.01G230200 Glycine max HOM05D003592 ORTHO05D004208 3.8e-18 95.1 130 46.9
FAN03G1827 Fragaria x ananassa HOM05D003592 ORTHO05D004208 5.0e-18 94.7 128 45.3
RcHm_v2.0_Chr1g0383761 Rosa chinensis HOM05D003592 ORTHO05D004208 5.0e-18 94.7 128 42.2
Eucgr.A02956 Eucalyptus grandis HOM05D003592 ORTHO05D004208 8.5e-18 94.0 85 51.8
Nitab4.5_0002302g0040 Nicotiana tabacum HOM05D003592 ORTHO05D004208 8.5e-18 94.0 132 47.0
FAN01G2998 Fragaria x ananassa HOM05D003592 ORTHO05D004208 1.1e-17 93.6 129 43.4
ClCG07G017260 Citrullus lanatus HOM05D003592 ORTHO05D004208 1.4e-17 93.2 87 54.0
Thhalv10017419m.g Eutrema salsugineum HOM05D003592 ORTHO05D004208 1.4e-17 93.2 129 45.7
Sed0007086 Sechium edule HOM05D003592 ORTHO05D004208 1.4e-17 93.2 125 43.2
FvH4_7g33540 Fragaria vesca HOM05D003592 ORTHO05D004208 2.5e-17 92.4 127 42.5
MD07G1305300 Malus domestica HOM05D003592 ORTHO05D004208 2.5e-17 92.4 125 42.4
FAN10G0119 Fragaria x ananassa HOM05D003592 ORTHO05D004208 3.2e-17 92.0 127 41.7
FAN10G2200 Fragaria x ananassa HOM05D003592 ORTHO05D004208 3.2e-17 92.0 127 41.7
Prupe.2G323400 Prunus persica HOM05D003592 ORTHO05D004208 4.2e-17 91.7 126 43.7
Haze_00584 Corylus avellana HOM05D003592 ORTHO05D004208 5.5e-17 91.3 127 42.5
Nitab4.5_0000021g0300 Nicotiana tabacum HOM05D003592 ORTHO05D004208 5.5e-17 91.3 132 47.7
Psat2g187520 Pisum sativum HOM05D003592 ORTHO05D004208 5.5e-17 91.3 131 44.3
CiPaw.05G236400 Carya illinoinensis HOM05D003592 ORTHO05D004208 7.2e-17 90.9 129 42.6
PGSC0003DMG400000541 Solanum tuberosum HOM05D003592 ORTHO05D004208 1.2e-16 90.1 127 45.7
MD01G1233000 Malus domestica HOM05D003592 ORTHO05D004208 1.6e-16 89.7 90 50.0
arahy.Tifrunner.gnm1.ann1.F45BIC Arachis hypogaea HOM05D003592 ORTHO05D004208 2.1e-16 89.4 125 46.4
Glyma.11G013200 Glycine max HOM05D003592 ORTHO05D004208 2.1e-16 89.4 122 47.5
MBI04_g21153_MAGBIO Magnolia biondii HOM05D003592 ORTHO05D004208 2.1e-16 89.4 89 53.9
Migut.F00955 Erythranthe guttata HOM05D003592 ORTHO05D004208 2.7e-16 89.0 126 47.6
Phvul.002G036900 Phaseolus vulgaris HOM05D003592 ORTHO05D004208 2.7e-16 89.0 131 44.3
arahy.Tifrunner.gnm1.ann1.I6057L Arachis hypogaea HOM05D003592 ORTHO05D004208 3.6e-16 88.6 123 47.2
LjContig00222g0008170 Lotus japonicus HOM05D003592 ORTHO05D004208 4.6e-16 88.2 129 45.7
MBI04_g29825_MAGBIO Magnolia biondii HOM05D000463 ORTHO05D013433 4.6e-16 88.2 86 53.5
PGR042G3489 Punica granatum HOM05D003592 ORTHO05D004208 6.1e-16 87.8 107 43.9
Sc13g0010720 Simmondsia chinensis HOM05D003592 ORTHO05D004208 6.1e-16 87.8 120 44.2
CSS0031198 Camellia sinensis var. sinensis HOM05D003592 ORTHO05D004208 1.0e-15 87.0 124 44.4
Cfa015910 Carpinus fangiana HOM05D003592 ORTHO05D004208 1.0e-15 87.0 85 49.4
Dinv29178 Davidia involucrata HOM05D003592 ORTHO05D004208 1.0e-15 87.0 92 52.2
Sopen03g027580 Solanum pennellii HOM05D003592 ORTHO05D004208 1.0e-15 87.0 125 46.4
Duzib128G1398 Durio zibethinus HOM05D003592 ORTHO05D004208 1.4e-15 86.7 137 40.1
Solyc03g096840.4 Solanum lycopersicum HOM05D003592 ORTHO05D004208 1.4e-15 86.7 125 46.4
Actinidia34296 Actinidia chinensis HOM05D003592 ORTHO05D004208 3.0e-15 85.5 123 45.5
TAR629G1675 Trochodendron aralioides HOM05D003592 ORTHO05D004208 3.0e-15 85.5 104 47.1
Medtr5g008210 Medicago truncatula HOM05D003592 ORTHO05D004208 5.1e-15 84.7 88 51.1
Actinidia08730 Actinidia chinensis HOM05D003592 ORTHO05D004208 6.7e-15 84.3 121 47.1
ATR0829G020 Amborella trichopoda HOM05D003592 ORTHO05D004208 8.8e-15 84.0 83 49.4
Migut.F00107 Erythranthe guttata HOM05D003592 ORTHO05D004208 8.8e-15 84.0 77 57.1
vmacro06490 Vaccinium macrocarpon HOM05D003592 ORTHO05D004208 8.8e-15 84.0 130 45.4
Oeu038117.1 Olea europaea HOM05D003592 ORTHO05D004208 1.5e-14 83.2 84 52.4
PGSC0003DMG400026933 Solanum tuberosum HOM05D003592 ORTHO05D004208 1.5e-14 83.2 121 42.1
Sed0014997 Sechium edule HOM05D003592 ORTHO05D004208 2.0e-14 82.8 96 44.8
VMungo1215G0435 Vigna mungo HOM05D003592 ORTHO05D004208 2.0e-14 82.8 85 54.1
AUR62005925 Chenopodium quinoa HOM05D003592 ORTHO05D004208 2.5e-14 82.4 98 46.9
Sc19g0000280 Simmondsia chinensis HOM05D003592 ORTHO05D004208 2.5e-14 82.4 123 40.7
Aqoxy161s001 Aquilegia oxysepala HOM05D003592 ORTHO05D004208 3.3e-14 82.0 98 46.9
Aqoxy161s002 Aquilegia oxysepala HOM05D003592 ORTHO05D004208 3.3e-14 82.0 98 46.9
Aqoxy3G02065 Aquilegia oxysepala HOM05D003592 ORTHO05D004208 3.3e-14 82.0 98 46.9
Aqoxy3G02066 Aquilegia oxysepala HOM05D003592 ORTHO05D004208 3.3e-14 82.0 98 46.9
Oeu061060.1 Olea europaea HOM05D003592 ORTHO05D004208 3.3e-14 82.0 84 48.8
Rhsim03G0219900 Rhododendron simsii HOM05D003592 ORTHO05D004208 3.3e-14 82.0 131 43.5
Rhsim09G0211800 Rhododendron simsii HOM05D003592 ORTHO05D004208 3.3e-14 82.0 79 51.9
CDE01G0008 Ceratophyllum demersum HOM05D003592 ORTHO05D004208 4.3e-14 81.6 79 53.2
Oeu055446.1 Olea europaea HOM05D003592 ORTHO05D004208 4.3e-14 81.6 86 48.8
AUR62018884 Chenopodium quinoa HOM05D003592 ORTHO05D004208 5.7e-14 81.3 98 44.9
Cc02_g00450 Coffea canephora HOM05D003592 ORTHO05D004208 7.4e-14 80.9 84 53.6
Cc05_g00720 Coffea canephora HOM05D003592 ORTHO05D004208 7.4e-14 80.9 84 53.6
Oeu063742.2 Olea europaea HOM05D003592 ORTHO05D004208 7.4e-14 80.9 121 43.8
Peaxi162Scf01650g00057 Petunia axillaris HOM05D003592 ORTHO05D004208 7.4e-14 80.9 124 41.9
PGR142G3032 Punica granatum HOM05D003592 ORTHO05D004208 9.7e-14 80.5 103 41.7
vmacro10180 Vaccinium macrocarpon HOM05D003592 ORTHO05D004208 9.7e-14 80.5 85 48.2
Ah.04g157330 Amaranthus hybridus HOM05D003592 ORTHO05D004208 1.7e-13 79.7 130 36.2
Hma1.2p1_1235F.1_g269160 Hydrangea macrophylla HOM05D003592 ORTHO05D004208 1.7e-13 79.7 84 52.4
CSS0018534 Camellia sinensis var. sinensis HOM05D003592 ORTHO05D004208 2.2e-13 79.3 85 50.6
QL09p026459 Quercus lobata HOM05D003592 ORTHO05D004208 2.2e-13 79.3 123 40.7
SalBow2G2852 Salvia bowleyana HOM05D003592 ORTHO05D004208 2.8e-13 79.0 79 53.2
Actinidia28268 Actinidia chinensis HOM05D003592 ORTHO05D004208 3.7e-13 78.6 123 43.1
SGA_v2.0_scaffold18G08501 Striga asiatica HOM05D003592 ORTHO05D004208 3.7e-13 78.6 118 43.2
EL10Ac3g05109 Beta vulgaris HOM05D003592 ORTHO05D004208 4.8e-13 78.2 124 37.1
MSTRG.14 Avicennia marina HOM05D003592 ORTHO05D004208 8.2e-13 77.4 81 51.9
MSTRG.26939 Avicennia marina HOM05D003592 ORTHO05D004208 1.1e-12 77.0 106 40.6
CDE12G0763 Ceratophyllum demersum HOM05D003592 ORTHO05D004208 1.4e-12 76.6 89 47.2
Sopen06g029220 Solanum pennellii HOM05D003592 ORTHO05D004208 1.4e-12 76.6 82 48.8
Actinidia18695 Actinidia chinensis HOM05D003592 ORTHO05D004208 1.8e-12 76.3 123 40.7
HanXRQChr02g0041191 Helianthus annuus HOM05D003592 ORTHO05D004208 1.8e-12 76.3 91 44.0
Nn1g02028 Nelumbo nucifera HOM05D003592 ORTHO05D004208 1.8e-12 76.3 60 58.3
Solyc06g072840.3 Solanum lycopersicum HOM05D003592 ORTHO05D004208 1.8e-12 76.3 82 48.8
AUR62028136 Chenopodium quinoa HOM05D003592 ORTHO05D004208 2.4e-12 75.9 83 48.2
Eucgr.K00100 Eucalyptus grandis HOM05D003592 ORTHO05D004208 3.1e-12 75.5 88 42.0
CAN.G303.68 Capsicum annuum HOM05D003592 ORTHO05D004208 4.1e-12 75.1 123 39.0
CiPaw.06G020500 Carya illinoinensis HOM05D003592 ORTHO05D004208 4.1e-12 75.1 96 43.8
Dinv17270 Davidia involucrata HOM05D003592 ORTHO05D004208 4.1e-12 75.1 102 47.1
ClCG01G004940 Citrullus lanatus HOM05D003592 ORTHO05D004208 5.3e-12 74.7 99 40.4
DCAR_010550 Daucus carota HOM05D003592 ORTHO05D004208 5.3e-12 74.7 119 37.0
Peaxi162Scf00815g00250 Petunia axillaris HOM05D003592 ORTHO05D004208 5.3e-12 74.7 101 42.6
MSTRG.8553 Avicennia marina HOM05D003592 ORTHO05D004208 6.9e-12 74.3 77 51.9
unitig_62.g23842 Utricularia gibba HOM05D003592 ORTHO05D004208 9.1e-12 73.9 78 53.8
MELO3C005442.2 Cucumis melo HOM05D003592 ORTHO05D004208 2.0e-11 72.8 98 43.9
Lsat_1_v5_gn_0_9420 Lactuca sativa HOM05D003592 ORTHO05D004208 2.0e-11 72.8 122 39.3
Ah.13g071180 Amaranthus hybridus HOM05D003592 ORTHO05D004208 3.4e-11 72.0 89 41.6
Sed0022343 Sechium edule HOM05D003592 ORTHO05D004208 3.4e-11 72.0 107 42.1
TAR375G0874 Trochodendron aralioides HOM05D003592 ORTHO05D004208 3.4e-11 72.0 79 49.4
HPP92_020881 Vanilla planifolia HOM05D003592 ORTHO05D004208 5.9e-11 71.2 93 40.9
HPP92_020885 Vanilla planifolia HOM05D003592 ORTHO05D004208 5.9e-11 71.2 93 40.9
Zm00001eb430170 Zea mays HOM05D003592 ORTHO05D004208 5.9e-11 71.2 87 44.8
Os04g0598000 Oryza sativa ssp. japonica HOM05D003592 ORTHO05D004208 7.7e-11 70.9 114 37.7
Hund21085 Selenicereus undatus HOM05D003592 ORTHO05D004208 1.7e-10 69.7 98 44.9
CsaV3_5G005170 Cucumis sativus L. HOM05D003592 ORTHO05D004208 2.2e-10 69.3 86 43.0
Nn3g19269 Nelumbo nucifera HOM05D003592 ORTHO05D004208 2.9e-10 68.9 81 44.4
PSO063G2386 Papaver somniferum HOM05D003592 ORTHO05D004208 2.9e-10 68.9 114 37.7
Peaxi162Scf00815g00235 Petunia axillaris HOM05D003592 ORTHO05D004208 5.0e-10 68.2 119 40.3
SEGI_20020 Sequoiadendron giganteum HOM05D003592 ORTHO05D004208 5.0e-10 68.2 81 43.2
SEGI_37277 Sequoiadendron giganteum HOM05D003592 ORTHO05D004208 6.5e-10 67.8 81 45.7
Nitab4.5_0006270g0010 Nicotiana tabacum HOM05D003592 ORTHO05D004208 8.5e-10 67.4 123 41.5
Peaxi162Scf00133g00111 Petunia axillaris HOM05D003592 ORTHO05D004208 8.5e-10 67.4 135 38.5
HanXRQChr09g0257211 Helianthus annuus HOM05D003592 ORTHO05D004208 1.9e-09 66.2 82 46.3
Hund09766 Selenicereus undatus HOM05D003592 ORTHO05D004208 2.5e-09 65.9 95 42.1
Hma1.2p1_0758F.1_g213540 Hydrangea macrophylla HOM05D003592 ORTHO05D004208 3.2e-09 65.5 82 45.1
Nitab4.5_0000115g0310 Nicotiana tabacum HOM05D003592 ORTHO05D004208 5.5e-09 64.7 118 37.3
SGA_v2.0_scaffold165G38224 Striga asiatica HOM05D003592 ORTHO05D004208 7.2e-09 64.3 82 47.6
Sopen06g029230 Solanum pennellii HOM05D003592 ORTHO05D004208 9.4e-09 63.9 126 39.7
PGSC0003DMG400027031 Solanum tuberosum HOM05D003592 ORTHO05D004208 9.4e-09 63.9 126 39.7
Solyc06g072845.1 Solanum lycopersicum HOM05D003592 ORTHO05D004208 1.6e-08 63.2 123 37.4
CDE11G0498 Ceratophyllum demersum HOM05D003592 ORTHO05D004208 2.1e-08 62.8 94 39.4
PSO170G2965 Papaver somniferum HOM05D003592 ORTHO05D004208 6.1e-08 61.2 116 37.9
SEGI_00089 Sequoiadendron giganteum HOM05D003592 ORTHO05D004208 7.9e-08 60.8 79 43.0
unitig_0.g1634 Utricularia gibba HOM05D003592 ORTHO05D004208 7.9e-08 60.8 111 34.2
Nitab4.5_0000115g0330 Nicotiana tabacum HOM05D003592 ORTHO05D004208 1.8e-07 59.7 118 39.0
Actinidia08732 Actinidia chinensis HOM05D003592 ORTHO05D004208 2.3e-07 59.3 39 61.5
HPP92_014744 Vanilla planifolia HOM05D003592 ORTHO05D004208 2.3e-07 59.3 99 37.4
ECA232G0247 Erigeron canadensis HOM05D003592 ORTHO05D004208 3.0e-07 58.9 97 39.2
Nitab4.5_0003012g0010 Nicotiana tabacum HOM05D003592 ORTHO05D004208 3.9e-07 58.5 75 46.7
HPP92_014706 Vanilla planifolia HOM05D003592 ORTHO05D004208 2.0e-06 56.2 117 34.2
Ah.13g071140 Amaranthus hybridus HOM05D003592 ORTHO05D004208 2.6e-06 55.8 97 40.2
CDE02G0247 Ceratophyllum demersum HOM05D003592 ORTHO05D004208 4.4e-06 55.1 99 35.4
SEGI_16015 Sequoiadendron giganteum HOM05D003592 ORTHO05D004208 7.4e-06 54.3 78 34.6


User provided reference genes

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