Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p39850 Brassica napus HOM05D010061 ORTHO05D015940 1.5e-178 629.4 325 100.0
BolC3t16248H Brassica oleracea HOM05D010061 ORTHO05D015940 8.7e-166 587.0 330 93.6
BcaC01g04459 Brassica carinata HOM05D010061 ORTHO05D015940 3.9e-158 561.6 292 99.3
BraA03t12444Z Brassica rapa HOM05D010061 ORTHO05D015940 9.3e-152 540.4 327 89.3
A03p32750 Brassica napus HOM05D010061 ORTHO05D015940 4.6e-151 538.1 327 89.0
BcaC01g04493 Brassica carinata HOM05D010061 ORTHO05D015940 5.2e-118 428.3 331 76.4
Sp3g01110 Schrenkiella parvula HOM05D010061 ORTHO05D015940 2.9e-92 342.8 360 60.8
Thhalv10022306m.g Eutrema salsugineum HOM05D010061 ORTHO05D015940 3.3e-80 302.8 332 59.9
AT3G01030 Arabidopsis thaliana HOM05D010061 ORTHO05D015940 1.0e-65 254.6 362 50.6
AL3G11240 Arabidopsis lyrata HOM05D010061 ORTHO05D015940 8.7e-65 251.5 361 49.6
Carub.0003s0115 Capsella rubella HOM05D010061 ORTHO05D015940 1.3e-63 247.7 356 49.4
BcaB01g05050 Brassica carinata HOM05D010061 ORTHO05D014864 4.3e-32 142.9 327 38.8
Sp6g28620 Schrenkiella parvula HOM05D010061 ORTHO05D014864 2.4e-30 137.1 335 34.3
C03p08160 Brassica napus HOM05D010061 ORTHO05D014864 1.5e-29 134.4 375 35.7
Thhalv10015968m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 7.7e-29 132.1 348 33.6
A03p07170 Brassica napus HOM05D010061 ORTHO05D014864 1.0e-28 131.7 336 39.3
Carub.0006s1364 Capsella rubella HOM05D010061 ORTHO05D014864 7.2e-27 125.6 352 34.7
BraA03t10039Z Brassica rapa HOM05D010061 ORTHO05D014864 9.4e-27 125.2 333 38.7
BolC3t13313H Brassica oleracea HOM05D010061 ORTHO05D014864 3.6e-26 123.2 336 35.1
AT5G15480 Arabidopsis thaliana HOM05D010061 ORTHO05D014864 1.0e-25 121.7 398 30.2
THA.LOC104803130 Tarenaya hassleriana HOM05D010061 ORTHO05D014864 3.9e-25 119.8 294 34.0
Thhalv10002882m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 2.0e-24 117.5 348 31.9
CARHR197830 Cardamine hirsuta HOM05D010061 ORTHO05D014864 3.4e-21 106.7 338 32.2
AL6G26330 Arabidopsis lyrata HOM05D010061 ORTHO05D014864 1.0e-20 105.1 421 28.3
unitig_699.g19908 Utricularia gibba HOM05D001658 ORTHO05D001406 5.2e-09 66.2 275 28.0
SGA_v2.0_scaffold4G02403 Striga asiatica HOM05D001658 ORTHO05D001406 2.2e-07 60.8 300 26.7
FvH4_2g07960 Fragaria vesca HOM05D000174 ORTHO05D025488 1.1e-06 58.5 266 27.8
FAN20G2648 Fragaria x ananassa HOM05D000174 ORTHO05D025488 1.4e-06 58.2 270 28.5
FAN24G1709 Fragaria x ananassa HOM05D000174 ORTHO05D025488 1.8e-06 57.8 266 27.8
Actinidia26246 Actinidia chinensis HOM05D001658 ORTHO05D001406 3.1e-06 57.0 325 26.2
MD09G1062700 Malus domestica HOM05D001658 ORTHO05D001406 7.0e-06 55.8 263 28.1


User provided reference genes

Program Settings