Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 5.8e-47 190.7 103 100.0
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 3.2e-37 158.3 85 97.6
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 2.1e-33 145.6 85 90.6
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 2.1e-33 145.6 85 90.6
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 8.6e-27 123.6 101 71.3
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 4.3e-26 121.3 78 85.9
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 4.3e-26 121.3 101 69.3
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.8e-25 118.6 96 69.8
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 4.7e-25 117.9 101 68.3
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 4.7e-25 117.9 101 68.3
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 8.1e-25 117.1 99 66.7
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 8.1e-25 117.1 101 65.3
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-24 116.7 101 68.3
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 1.8e-24 115.9 71 90.1
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.8e-24 115.9 101 65.3
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.2e-23 113.2 99 64.6
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 3.4e-23 111.7 102 67.6
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-18 95.5 107 57.9
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 6.2e-17 90.9 104 52.9
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 1.8e-16 89.4 99 56.6
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.9e-14 81.3 91 53.8
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 2.4e-13 79.0 67 68.7
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 4.2e-13 78.2 83 59.0
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 9.3e-13 77.0 77 51.9
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 1.6e-12 76.3 106 42.5
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.1e-12 75.9 104 41.3
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 7.8e-12 73.9 80 53.8
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 7.8e-12 73.9 106 41.5
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 2.3e-11 72.4 107 38.3
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 4.3e-10 68.2 117 35.9
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 5.6e-10 67.8 102 39.2
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 5.6e-10 67.8 102 36.3
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 7.3e-10 67.4 107 36.4
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 9.6e-10 67.0 102 38.2
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 9.6e-10 67.0 114 35.1
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 9.6e-10 67.0 114 35.1
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 1.3e-09 66.6 105 36.2
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.6e-09 66.2 103 37.9
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 2.1e-09 65.9 102 35.3
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 4.8e-09 64.7 99 37.4
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 4.8e-09 64.7 107 35.5
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 6.2e-09 64.3 99 36.4
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 6.2e-09 64.3 106 35.8
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 8.1e-09 63.9 103 35.0
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 8.1e-09 63.9 102 35.3
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 8.1e-09 63.9 107 37.4
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.1e-08 63.5 115 33.9
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.1e-08 63.5 102 33.3
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.4e-08 63.2 88 45.5
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.4e-08 63.2 99 38.4
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.8e-08 62.8 75 40.0
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.8e-08 62.8 113 38.1
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 2.4e-08 62.4 117 30.8
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 2.4e-08 62.4 99 36.4
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 3.1e-08 62.0 102 34.3
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.1e-08 62.0 105 34.3
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 4.0e-08 61.6 117 31.6
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 4.0e-08 61.6 80 38.8
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 5.3e-08 61.2 102 33.3
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 5.3e-08 61.2 100 34.0
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.0e-08 60.5 101 39.6
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.2e-07 60.1 101 37.6
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.2e-07 60.1 101 37.6
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.5e-07 59.7 104 35.6
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.5e-07 59.7 79 43.0
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.5e-07 59.7 102 33.3
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.5e-07 59.7 102 35.3
C02p46270 Brassica napus HOM05D003570 ORTHO05D027618 2.6e-07 58.9 63 52.4
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 2.6e-07 58.9 116 31.9
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 2.6e-07 58.9 107 31.8
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 3.4e-07 58.5 106 34.0
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 3.4e-07 58.5 75 40.0
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 3.4e-07 58.5 103 35.9
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.5e-07 58.2 114 35.1
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 7.6e-07 57.4 104 31.7
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 7.6e-07 57.4 88 37.5
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 9.9e-07 57.0 73 39.7
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.3e-06 56.6 107 30.8
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.3e-06 56.6 121 31.4
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.3e-06 56.6 73 39.7
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.3e-06 56.6 115 32.2
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 1.7e-06 56.2 108 32.4
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.9e-06 55.5 121 31.4
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.8e-06 55.1 118 30.5
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 3.8e-06 55.1 101 36.6
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 4.9e-06 54.7 108 31.5
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 4.9e-06 54.7 73 37.0
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 8.4e-06 53.9 116 30.2


User provided reference genes

Program Settings