Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p38560 Brassica napus HOM05D000313 ORTHO05D021765 6.6e-90 334.0 161 100.0
BolC3t16129H Brassica oleracea HOM05D000313 ORTHO05D021765 6.6e-58 227.6 233 56.2
BcaC01g06813 Brassica carinata HOM05D000313 ORTHO05D021765 3.3e-57 225.3 113 97.3
BcaB05g23819 Brassica carinata HOM05D000756 ORTHO05D000604 7.9e-35 151.0 97 79.4
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-30 136.0 114 63.2
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-29 132.1 114 60.5
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-29 131.7 167 47.3
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-28 128.3 143 49.7
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-27 127.1 100 68.0
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-27 126.7 128 54.7
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-27 124.4 137 51.1
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-26 123.6 135 54.8
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-26 122.9 167 45.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-26 122.9 134 55.2
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 2.3e-26 122.9 167 45.5
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 3.0e-26 122.5 116 57.8
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-24 116.3 134 52.2
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-24 115.2 162 42.6
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-24 115.2 167 44.3
BolC5t32686H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-23 113.2 167 41.9
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-23 111.3 68 76.5
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-23 111.3 68 76.5
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-22 110.5 163 42.9
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-22 109.0 64 79.7
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-22 108.2 62 80.6
BraA03t14449Z Brassica rapa HOM05D000313 ORTHO05D000065 7.7e-22 107.8 64 78.1
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-21 107.5 170 42.9
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-21 106.7 157 42.7
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-21 105.9 64 78.1
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-21 105.9 67 73.1
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-21 105.5 131 51.1
A06p31410 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-21 104.4 70 74.3
C07p40640 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-21 104.4 64 76.6
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-20 103.2 181 39.8
C07p50150 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-20 102.4 104 54.8
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-19 100.1 68 69.1
A08p13670 Brassica napus HOM05D000313 ORTHO05D021765 2.7e-19 99.4 65 72.3
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-19 97.8 164 35.4
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-18 95.5 65 67.7
C07p18950 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-18 95.5 67 70.1
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-17 93.2 157 35.7
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-17 93.2 121 48.8
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 2.6e-17 92.8 69 63.8
A02p25960 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-17 92.0 74 66.2
BraA02t07522Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-16 90.5 73 60.3
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-16 88.2 64 64.1
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-16 87.8 64 64.1
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-16 87.8 64 64.1
C09p46520 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-15 84.7 103 51.5
BolC9t57505H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-15 84.7 103 51.5
A02p25350 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-15 84.3 73 58.9
BolC2t09877H Brassica oleracea HOM05D000313 ORTHO05D000065 9.1e-15 84.3 67 61.2
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-14 81.6 148 37.8
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-13 80.9 167 37.7
BolC3t21218H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-13 80.5 124 41.9
A04p09780 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-13 80.1 60 65.0
C02p38600 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-13 80.1 55 63.6
BraA04t16639Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-13 80.1 60 65.0
A07p36090 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-13 79.7 44 77.3
BcaC09g51352 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-13 79.3 95 37.9
BcaC02g09918 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-13 78.6 94 38.3
C02p44280 Brassica napus HOM05D000313 ORTHO05D096605 8.5e-13 77.8 41 80.5
BraA02t08225Z Brassica rapa HOM05D000313 ORTHO05D021765 8.5e-13 77.8 168 36.9
BcaC04g20809 Brassica carinata HOM05D000313 ORTHO05D032045 1.4e-12 77.0 70 60.0
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 5.5e-12 75.1 98 38.8
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-11 73.9 142 38.0
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-11 73.9 148 36.5
C08p36910 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-11 73.9 124 39.5
C03p49010 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-11 73.6 41 73.2
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-11 72.8 98 36.7
C04p35220 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-11 72.4 90 36.7
BolC3t17675H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-11 72.0 60 55.0
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-11 71.6 98 38.8
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-10 69.7 138 36.2
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-10 68.9 127 37.0
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 8.8e-10 67.8 131 35.9
BolC4t25076H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-09 67.4 101 33.7
BolC6t39891H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-09 67.4 101 33.7
A07p04670 Brassica napus HOM05D000313 ORTHO05D042285 1.5e-09 67.0 153 30.1
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-09 67.0 135 36.3
BraA02t07841Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-09 66.6 73 49.3
BcaC05g28024 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-09 66.2 73 49.3
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-09 66.2 45 57.8
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-09 66.2 45 57.8
BolC5t32778H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-09 66.2 73 49.3
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-09 66.2 45 57.8
BcaC09g48413 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-09 65.9 38 68.4
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-09 65.5 45 60.0
C01p17210 Brassica napus HOM05D000313 ORTHO05D021674 4.4e-09 65.5 45 55.6
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 4.4e-09 65.5 48 56.2
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-09 65.1 48 56.2
A03p61800 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-09 65.1 48 56.2
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-09 64.3 48 56.2
C05p40380 Brassica napus HOM05D000313 ORTHO05D000065 9.7e-09 64.3 69 47.8
C06p11820 Brassica napus HOM05D000313 ORTHO05D024047 1.3e-08 63.9 48 58.3
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-08 63.5 45 55.6
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.5 45 55.6
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.5 45 55.6
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.5 45 55.6
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-08 63.5 45 55.6
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-08 63.5 45 55.6
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-08 63.2 45 55.6
BcaC09g49506 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-08 63.2 63 54.0
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-08 63.2 45 55.6
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-08 63.2 48 52.1
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-08 63.2 45 55.6
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-08 63.2 45 55.6
BolC5t33369H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-08 63.2 48 52.1
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-08 63.2 45 55.6
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-08 62.8 45 55.6
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-08 62.8 45 55.6
C03p10480 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-08 62.8 45 55.6
BcaC08g43805 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-08 62.4 48 56.2
BcaC09g52269 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-08 62.4 45 53.3
C08p38340 Brassica napus HOM05D000313 ORTHO05D024403 3.7e-08 62.4 74 39.2
BolC7t40545H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-08 62.0 45 55.6
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-08 61.6 131 33.6
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-08 61.2 48 54.2
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-08 61.2 48 54.2
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 48 54.2
BcaC03g17051 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 49 53.1
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.8 45 55.6
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-07 60.8 45 55.6
C04p02900 Brassica napus HOM05D000313 ORTHO05D040407 1.4e-07 60.5 45 53.3
BolC4t21930H Brassica oleracea HOM05D000313 ORTHO05D040407 1.4e-07 60.5 45 53.3
BolC1t03286H Brassica oleracea HOM05D014428 ORTHO05D021653 1.8e-07 60.1 99 39.4
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-07 59.7 48 52.1
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-07 59.7 48 54.2
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-07 59.7 48 52.1
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-07 59.7 48 52.1
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-07 59.3 45 53.3
BcaC03g14145 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-07 59.3 48 54.2
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-07 59.3 86 34.9
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-07 59.3 49 55.1
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-07 59.3 50 54.0
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-07 59.3 45 53.3
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-07 59.3 50 54.0
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-07 59.3 50 54.0
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-07 59.3 45 53.3
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-07 59.3 45 53.3
BcaB05g22169 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-07 58.9 45 51.1
BcaC02g09566 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-07 58.9 48 52.1
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-07 58.9 48 54.2
A05p08730 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 48 52.1
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 48 50.0
C09p41840 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 44 54.5
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-07 58.9 45 53.3
BolC6t37297H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-07 58.9 44 54.5
BolC9t57071H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-07 58.9 44 54.5
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 4.1e-07 58.9 48 50.0
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 5.3e-07 58.5 48 54.2
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 5.3e-07 58.5 48 54.2
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 5.3e-07 58.5 48 52.1
A08p14190 Brassica napus HOM05D014428 ORTHO05D021653 5.3e-07 58.5 99 39.4
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-07 58.5 45 53.3
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-07 58.5 48 52.1
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 5.3e-07 58.5 48 52.1
BraA08t33413Z Brassica rapa HOM05D014428 ORTHO05D021653 5.3e-07 58.5 99 39.4
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-07 58.2 48 52.1
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-07 58.2 49 53.1
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-07 58.2 48 52.1
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-07 57.8 102 32.4
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-07 57.8 48 52.1
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-07 57.8 49 53.1
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-07 57.8 50 52.0
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-07 57.8 48 52.1
C06p34380 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-07 57.8 30 93.3
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 57.4 47 53.2
BcaB01g00111 Brassica carinata HOM05D000313 ORTHO05D021674 1.6e-06 57.0 44 54.5
BcaB06g27486 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 49 46.9
A04p04790 Brassica napus HOM05D024365 ORTHO05D000065 1.6e-06 57.0 39 66.7
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 57.0 48 50.0
BolC3t19587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 57.0 39 69.2
BcaB02g10926 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-06 56.6 75 36.0
BcaB03g15252 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-06 56.6 44 52.3
BcaB05g24793 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-06 56.6 44 52.3
A07p14660 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.6 50 52.0
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.6 50 52.0
C07p41800 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.6 32 81.2
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.6 48 47.9
BolC7t44711H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-06 56.6 32 81.2
A02p32110 Brassica napus HOM05D000313 ORTHO05D021765 2.6e-06 56.2 31 87.1
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 3.5e-06 55.8 86 34.9
BolC8t47704H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-06 55.8 45 51.1
BraA09t36871Z Brassica rapa HOM05D000313 ORTHO05D000065 4.5e-06 55.5 28 92.9
BcaNung07020 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-06 55.1 44 50.0
BcaC01g00020 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-06 54.7 62 37.1
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-06 54.7 49 40.8
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-06 54.7 34 73.5
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-06 54.7 49 40.8
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-06 54.7 40 52.5
C05p25090 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-06 54.7 69 39.1
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 40 52.5
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 49 40.8


User provided reference genes

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