Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 2.2e-171 605.5 308 100.0
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.2e-85 319.3 165 98.8
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 3.0e-83 312.8 166 97.0
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.7e-78 297.0 154 98.7
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 4.6e-76 288.9 154 96.8
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.4e-72 277.3 157 91.1
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.9e-69 266.9 169 84.0
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 6.1e-68 261.9 166 82.5
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.3e-66 256.1 168 81.0
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.3e-66 256.1 168 81.0
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 9.7e-66 254.6 165 80.6
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 3.1e-64 249.6 171 77.8
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.4e-61 240.7 166 78.3
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 7.2e-53 211.8 150 74.0
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 2.4e-48 196.8 155 65.2
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.2e-42 177.9 108 85.2
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.7e-41 172.9 154 57.1
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 3.1e-40 169.9 153 56.9
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.6e-39 167.5 158 53.8
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 2.0e-39 167.2 151 53.6
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.0e-38 164.9 169 50.3
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.7e-38 164.1 150 54.7
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 3.8e-38 162.9 157 49.7
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 3.8e-38 162.9 169 50.9
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 8.6e-38 161.8 159 51.6
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.1e-37 161.4 156 50.6
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.1e-37 161.4 156 50.6
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.5e-37 161.0 144 54.9
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.5e-37 161.0 144 54.9
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.9e-37 160.6 147 53.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 2.5e-37 160.2 157 52.2
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 4.2e-37 159.5 157 52.2
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 5.5e-37 159.1 159 50.9
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 7.2e-37 158.7 156 50.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 7.2e-37 158.7 159 52.2
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 9.5e-37 158.3 151 52.3
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.2e-36 157.9 171 46.2
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.6e-36 157.5 157 50.3
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 3.6e-36 156.4 147 52.4
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 3.6e-36 156.4 158 51.3
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 4.7e-36 156.0 180 47.8
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 8.0e-36 155.2 157 50.3
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 8.0e-36 155.2 163 49.7
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.0e-35 154.8 156 49.4
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.0e-35 154.8 168 50.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.8e-35 154.1 157 47.1
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.3e-35 153.7 167 49.1
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 3.0e-35 153.3 167 47.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 4.0e-35 152.9 177 44.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 5.2e-35 152.5 146 52.7
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 8.9e-35 151.8 155 51.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 8.9e-35 151.8 136 55.1
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 8.9e-35 151.8 151 50.3
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.2e-34 151.4 150 50.0
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.0e-34 150.6 154 48.7
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 2.6e-34 150.2 162 49.4
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 2.6e-34 150.2 156 48.1
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.6e-34 150.2 153 48.4
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.4e-34 149.8 159 50.3
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 4.4e-34 149.4 148 50.7
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 4.4e-34 149.4 146 53.4
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 7.5e-34 148.7 136 54.4
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 9.8e-34 148.3 174 46.0
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 9.8e-34 148.3 172 45.3
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.3e-33 147.9 145 53.8
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.2e-33 147.1 180 46.1
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.2e-33 147.1 160 45.0
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.7e-33 146.4 159 49.1
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 3.7e-33 146.4 155 48.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 3.7e-33 146.4 155 47.1
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 4.9e-33 146.0 143 52.4
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 8.3e-33 145.2 183 44.3
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 8.3e-33 145.2 136 52.9
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.1e-32 144.8 151 45.0
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.1e-32 144.8 147 52.4
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.1e-32 144.8 152 47.4
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.4e-32 144.4 143 51.0
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-32 144.4 159 49.1
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.4e-32 143.7 154 49.4
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 3.1e-32 143.3 150 48.0
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.6e-31 141.0 190 42.6
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-31 140.6 156 47.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.0e-31 140.6 165 49.7
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.5e-31 139.8 150 48.0
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.5e-31 139.8 150 50.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.5e-31 139.4 150 50.7
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 5.9e-31 139.0 156 46.8
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 7.8e-31 138.7 149 48.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.0e-30 138.3 152 46.7
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 2.5e-29 133.7 135 52.6
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 5.6e-29 132.5 169 45.6
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 7.3e-29 132.1 110 56.4
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 7.3e-29 132.1 109 57.8
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.2e-28 131.3 163 42.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.6e-28 131.0 153 46.4
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.8e-27 127.5 139 49.6
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.1e-27 126.7 152 43.4
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 3.1e-27 126.7 126 48.4
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 7.5e-26 122.1 128 50.0
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 1.3e-25 121.3 146 44.5
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.1e-24 118.2 158 45.6
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.9e-24 117.5 156 42.3
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 4.1e-24 116.3 132 46.2
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 7.0e-24 115.5 118 48.3
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 8.6e-22 108.6 96 55.2
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.9e-21 107.5 158 39.9
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 6.4e-17 92.4 74 55.4
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.5e-15 86.7 74 52.7
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.2e-09 67.4 129 35.7
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 8.3e-09 65.5 83 47.0
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.1e-08 63.2 59 55.9
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.0e-06 58.5 135 30.4


User provided reference genes

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