Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p38250 Brassica napus HOM05D000300 ORTHO05D041312 1.4e-34 149.1 74 100.0
BolC3t16106H Brassica oleracea HOM05D000300 ORTHO05D041312 1.7e-16 89.0 40 100.0
A03p31320 Brassica napus HOM05D000300 ORTHO05D000383 1.4e-15 85.9 42 92.9
BraA03t12314Z Brassica rapa HOM05D000300 ORTHO05D000383 3.2e-15 84.7 42 90.5
BcaB01g02403 Brassica carinata HOM05D000300 ORTHO05D000383 5.1e-13 77.4 49 79.6
Thhalv10029427m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 8.7e-13 76.6 46 76.1
AL6G51260 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 1.6e-11 72.4 45 77.8
Carub.0006s3524 Capsella rubella HOM05D000300 ORTHO05D000383 2.8e-11 71.6 45 73.3
CARHR249690 Cardamine hirsuta HOM05D000300 ORTHO05D000383 2.8e-11 71.6 45 71.1
Sp6g01870 Schrenkiella parvula HOM05D000300 ORTHO05D000383 4.8e-11 70.9 49 71.4
AT4G01990 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 2.4e-10 68.6 45 71.1
Carub.0001s0142 Capsella rubella HOM05D000300 ORTHO05D000383 2.6e-09 65.1 51 56.9
AL1G11720 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 4.5e-09 64.3 49 57.1
AT1G02370 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 4.5e-09 64.3 49 57.1
CARHR001690 Cardamine hirsuta HOM05D000300 ORTHO05D000383 4.5e-09 64.3 49 57.1
Aa31LG5G1620 Aethionema arabicum HOM05D000300 ORTHO05D000383 5.8e-09 63.9 45 71.1
Sp1g01450 Schrenkiella parvula HOM05D000300 ORTHO05D000383 1.3e-08 62.8 45 62.2
BcaC05g24618 Brassica carinata HOM05D000300 ORTHO05D000383 2.2e-08 62.0 49 57.1
A10p01140 Brassica napus HOM05D000300 ORTHO05D000383 2.2e-08 62.0 45 60.0
C05p01170 Brassica napus HOM05D000300 ORTHO05D000383 2.2e-08 62.0 49 57.1
BolC5t28899H Brassica oleracea HOM05D000300 ORTHO05D000383 2.2e-08 62.0 49 57.1
BraA10t42393Z Brassica rapa HOM05D000300 ORTHO05D000383 2.2e-08 62.0 49 57.1
BcaB03g15787 Brassica carinata HOM05D000300 ORTHO05D000383 4.9e-08 60.8 49 55.1
THA.LOC104815919 Tarenaya hassleriana HOM05D000300 ORTHO05D000383 4.9e-08 60.8 49 55.1
Potri.014G119000 Populus trichocarpa HOM05D000300 ORTHO05D000383 1.4e-07 59.3 49 55.1
Sabra14G0088200 Salix brachista HOM05D000300 ORTHO05D000383 1.4e-07 59.3 49 55.1
Thhalv10007036m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 4.2e-07 57.8 45 53.3
Potri.002G194400 Populus trichocarpa HOM05D000300 ORTHO05D000383 7.1e-07 57.0 44 54.5
Glyma.02G011200 Glycine max HOM05D000300 ORTHO05D000383 1.2e-06 56.2 46 52.2
Aa31LG1G9990 Aethionema arabicum HOM05D000300 ORTHO05D000383 3.5e-06 54.7 49 49.0
Cpa.g.sc18.64 Carica papaya HOM05D000300 ORTHO05D000383 4.6e-06 54.3 44 52.3


User provided reference genes

Program Settings