Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p38190 Brassica napus HOM05D001921 ORTHO05D001784 1.6e-71 272.7 141 100.0
BcaC01g06781 Brassica carinata HOM05D001921 ORTHO05D001784 4.3e-69 264.6 140 97.9
BolC3t16100H Brassica oleracea HOM05D001921 ORTHO05D001784 2.8e-68 261.9 140 96.4
A03p31290 Brassica napus HOM05D001921 ORTHO05D001784 1.2e-58 229.9 142 88.7
BraA03t12309Z Brassica rapa HOM05D001921 ORTHO05D001784 2.0e-58 229.2 142 88.7
BcaB01g02407 Brassica carinata HOM05D001921 ORTHO05D001784 1.9e-53 212.6 143 84.6
BcaB01g02410 Brassica carinata HOM05D001921 ORTHO05D001784 1.9e-53 212.6 143 84.6
Sp6g01920 Schrenkiella parvula HOM05D001921 ORTHO05D001784 6.7e-38 161.0 160 63.1
BcaC04g24030 Brassica carinata HOM05D001921 ORTHO05D001784 1.5e-37 159.8 157 63.7
BolC9t53094H Brassica oleracea HOM05D001921 ORTHO05D001784 2.5e-37 159.1 157 63.7
C09p01610 Brassica napus HOM05D001921 ORTHO05D001784 1.3e-36 156.8 157 63.1
A09p01490 Brassica napus HOM05D001921 ORTHO05D001784 3.7e-36 155.2 156 62.2
BraA09t35810Z Brassica rapa HOM05D001921 ORTHO05D001784 3.7e-36 155.2 156 62.2
BcaB01g02085 Brassica carinata HOM05D001921 ORTHO05D001784 7.6e-34 147.5 164 56.7
Thhalv10029029m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 1.3e-33 146.7 174 56.3
AL6G51210 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 3.7e-28 128.6 163 54.0
AT4G02040 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 6.3e-28 127.9 159 50.9
BcaC04g24029 Brassica carinata HOM05D000361 ORTHO05D004243 4.1e-27 125.2 137 61.3
Carub.0006s3519 Capsella rubella HOM05D001921 ORTHO05D001784 1.0e-25 120.6 159 51.6
CARHR249650 Cardamine hirsuta HOM05D001921 ORTHO05D001784 8.8e-22 107.5 166 47.0
BcaB01g02086 Brassica carinata HOM05D001921 ORTHO05D001784 2.1e-15 86.3 95 55.8
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 7.9e-15 84.3 152 44.1
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 7.9e-15 84.3 152 44.1
Duzib187G0406 Durio zibethinus HOM05D001921 ORTHO05D001784 7.9e-15 84.3 169 42.6
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 1.8e-14 83.2 168 41.7
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.3e-14 82.8 160 41.2
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.0e-14 82.4 159 41.5
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 1.5e-13 80.1 156 37.8
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 3.3e-13 79.0 140 43.6
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 9.7e-13 77.4 155 41.9
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.3e-12 77.0 159 39.6
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 3.7e-12 75.5 176 39.2
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.7e-12 75.5 160 38.8
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 8.2e-12 74.3 98 51.0
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 1.1e-11 73.9 117 46.2
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 3.1e-11 72.4 163 39.9
Gorai.010G110500 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.1e-11 72.0 152 40.8
Psat1g022640 Pisum sativum HOM05D001921 ORTHO05D001784 5.3e-11 71.6 84 47.6
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 5.3e-11 71.6 188 36.2
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 9.1e-11 70.9 175 36.0
Gohir.D06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.2e-10 70.5 152 40.8
Thecc.09G037400 Theobroma cacao HOM05D001921 ORTHO05D001784 1.2e-10 70.5 168 38.1
Gohir.A06G095800 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.6e-10 70.1 111 44.1
Gohir.A06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.6e-10 70.1 169 38.5
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.0e-10 69.7 178 34.8
Gohir.D06G096000 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.6e-10 69.3 170 38.8
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 2.6e-10 69.3 189 36.0
Gorai.010G110700 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.5e-10 68.6 170 38.2
Lj6g0019201 Lotus japonicus HOM05D001921 ORTHO05D001784 4.5e-10 68.6 104 44.2
Ca_03892_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 7.7e-10 67.8 123 38.2
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.0e-09 67.4 173 36.4
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 1.0e-09 67.4 164 33.5
DCAR_014829 Daucus carota HOM05D001921 ORTHO05D001784 1.3e-09 67.0 142 38.0
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 2.2e-09 66.2 174 36.8
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.9e-09 65.9 156 42.3
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 2.9e-09 65.9 189 34.9
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 2.9e-09 65.9 163 34.4
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 3.8e-09 65.5 106 39.6
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.8e-09 65.5 172 36.0
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 5.0e-09 65.1 156 41.0
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 5.0e-09 65.1 116 41.4
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 5.0e-09 65.1 176 36.9
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 5.0e-09 65.1 97 40.2
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 1.1e-08 63.9 97 39.2
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 1.9e-08 63.2 128 38.3
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 1.9e-08 63.2 174 35.1
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.5e-08 62.8 118 39.0
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 2.5e-08 62.8 104 44.2
Actinidia23087 Actinidia chinensis HOM05D001921 ORTHO05D001784 3.2e-08 62.4 96 41.7
CANSAT11G0699 Cannabis sativa HOM05D001921 ORTHO05D001784 3.2e-08 62.4 194 32.5
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 3.2e-08 62.4 112 40.2
Peaxi162Scf00116g00043 Petunia axillaris HOM05D001921 ORTHO05D001784 3.2e-08 62.4 113 36.3
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 3.2e-08 62.4 173 34.7
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 5.5e-08 61.6 170 33.5
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 7.2e-08 61.2 98 41.8
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 7.2e-08 61.2 163 36.8
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 9.4e-08 60.8 100 40.0
DCAR_017895 Daucus carota HOM05D001921 ORTHO05D001784 9.4e-08 60.8 80 46.2
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 9.4e-08 60.8 174 35.1
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 9.4e-08 60.8 120 39.2
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 1.2e-07 60.5 122 36.9
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.2e-07 60.5 92 39.1
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-07 60.1 174 34.5
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 1.6e-07 60.1 116 37.9
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 2.7e-07 59.3 183 34.4
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 2.7e-07 59.3 129 34.1
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 2.7e-07 59.3 123 39.8
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 3.6e-07 58.9 140 35.0
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 3.6e-07 58.9 180 33.9
EL10Ac6g15007 Beta vulgaris HOM05D001921 ORTHO05D001784 4.7e-07 58.5 126 39.7
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.7e-07 58.5 129 36.4
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 4.7e-07 58.5 92 39.1
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 4.7e-07 58.5 100 44.0
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 1.0e-06 57.4 172 33.1
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 1.0e-06 57.4 103 37.9
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 1.8e-06 56.6 160 35.0
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.8e-06 56.6 128 35.9
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.8e-06 56.6 129 35.7
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.8e-06 56.6 123 35.8
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 2.3e-06 56.2 116 38.8
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.3e-06 56.2 81 42.0
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.0e-06 55.8 120 38.3
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 3.0e-06 55.8 108 39.8
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 5.2e-06 55.1 122 38.5
Oeu032694.1 Olea europaea HOM05D001921 ORTHO05D001784 5.2e-06 55.1 93 41.9
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 5.2e-06 55.1 143 37.8
TPR.G22804 Trifolium pratense HOM05D001921 ORTHO05D001784 5.2e-06 55.1 147 34.0
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 6.7e-06 54.7 161 30.4
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 6.7e-06 54.7 98 39.8
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 8.8e-06 54.3 117 35.9
FvH4_7g22490 Fragaria vesca HOM05D031311 ORTHO05D020609 8.8e-06 54.3 101 39.6


User provided reference genes

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