Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 3.7e-185 651.4 323 100.0
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 2.3e-174 615.5 323 95.4
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 4.1e-168 594.7 323 92.9
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 5.4e-168 594.3 324 93.5
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 5.4e-168 594.3 324 93.5
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 8.1e-148 527.3 323 83.9
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 5.5e-144 514.6 323 80.5
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 6.7e-142 507.7 324 80.6
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 3.2e-136 488.8 323 77.1
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 3.7e-132 475.3 325 75.7
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 1.2e-130 470.3 323 75.2
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.1e-119 433.0 301 75.1
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 6.5e-113 411.4 332 65.1
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.0e-94 349.4 325 56.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 2.6e-93 346.3 299 57.5
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 4.4e-93 345.5 326 55.8
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 5.7e-93 345.1 299 56.9
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.2e-92 343.2 323 55.1
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 4.8e-92 342.0 323 54.8
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.8e-92 342.0 323 54.8
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 2.4e-91 339.7 327 54.1
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 2.7e-90 336.3 324 53.7
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 2.7e-90 336.3 336 52.7
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 5.9e-90 335.1 299 57.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.3e-89 334.0 326 54.3
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 1.7e-89 333.6 299 55.2
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 5.0e-89 332.0 322 52.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 1.6e-87 327.0 317 52.7
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 2.1e-87 326.6 300 57.0
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 4.7e-87 325.5 310 54.5
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 2.3e-86 323.2 327 50.8
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.0e-86 322.8 318 52.5
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.2e-85 320.9 357 48.5
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.5e-85 320.5 325 50.5
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.6e-85 319.7 321 51.7
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.7e-85 318.5 315 53.3
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.3e-84 317.4 360 48.6
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-84 317.0 315 53.3
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.2e-84 316.6 321 51.4
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.2e-84 316.6 310 53.9
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 2.2e-84 316.6 353 49.0
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.8e-84 316.2 315 53.3
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.7e-84 315.8 259 58.7
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 6.3e-84 315.1 298 53.7
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 8.3e-84 314.7 321 51.1
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 9.2e-83 311.2 316 51.3
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.0e-82 310.1 300 52.7
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 7.8e-82 308.1 293 51.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.7e-81 307.0 325 49.5
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.3e-81 306.6 323 48.9
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.3e-81 306.6 298 53.0
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 5.0e-81 305.4 304 54.3
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 6.6e-81 305.1 314 52.5
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 6.6e-81 305.1 287 53.3
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 5.6e-80 302.0 307 52.1
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.8e-79 299.7 324 49.1
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 3.6e-79 299.3 311 51.8
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 1.8e-78 297.0 303 52.1
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 2.3e-78 296.6 322 50.3
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 4.0e-78 295.8 303 50.2
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 6.8e-78 295.0 335 49.3
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 8.9e-78 294.7 295 52.5
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.2e-77 294.3 260 54.6
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.0e-77 293.5 296 50.3
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 3.4e-77 292.7 273 50.9
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 4.4e-77 292.4 334 47.9
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.2e-76 290.0 267 55.1
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 2.9e-76 289.7 303 49.5
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 4.9e-76 288.9 318 47.2
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 6.4e-76 288.5 231 61.0
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 3.2e-75 286.2 312 49.0
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.1e-75 285.8 298 49.7
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 7.0e-75 285.0 306 50.0
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.2e-74 284.3 296 49.0
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.7e-73 280.4 320 46.6
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 2.3e-73 280.0 320 45.9
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 3.0e-73 279.6 334 48.2
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 3.0e-73 279.6 314 47.8
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 6.6e-73 278.5 344 45.9
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.5e-72 277.3 321 47.7
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 1.9e-72 276.9 278 50.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.5e-72 276.6 291 50.9
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.1e-71 273.5 292 50.0
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 3.6e-71 272.7 326 47.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 6.2e-71 271.9 291 50.2
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.4e-70 270.8 234 54.3
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.8e-70 270.4 321 46.1
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.8e-70 270.4 261 52.1
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 1.8e-70 270.4 306 47.1
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 4.0e-70 269.2 321 46.4
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 3.7e-68 262.7 302 48.0
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.4e-67 260.8 211 60.2
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 7.5e-61 238.4 303 43.2
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 8.3e-60 235.0 270 46.3
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 7.1e-59 231.9 303 42.6
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 7.1e-51 205.3 209 50.2
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 3.1e-46 189.9 326 37.7
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 5.3e-38 162.5 139 52.5
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-36 157.5 157 54.8
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.4e-30 137.1 64 95.3
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 4.0e-30 136.3 147 49.0
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 5.3e-30 136.0 140 50.7
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.5e-29 134.4 97 75.3
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 2.0e-29 134.0 231 33.3
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.2e-21 108.2 255 30.6
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.0e-21 107.5 125 44.8
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.3e-17 94.7 138 38.4
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 2.4e-14 84.0 113 39.8
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-08 65.1 97 40.2
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 3.3e-08 63.5 97 39.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 1.1e-06 58.5 219 22.4
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.8e-06 57.8 86 37.2
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 3.1e-06 57.0 52 48.1


User provided reference genes

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