Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p36550 Brassica napus HOM05D009403 ORTHO05D013517 6.5e-68 260.8 148 100.0
BolC7t41456H Brassica oleracea HOM05D009403 ORTHO05D013517 1.0e-57 226.9 148 87.2
C07p10110 Brassica napus HOM05D009403 ORTHO05D013517 2.3e-57 225.7 148 82.4
BraA08t32689Z Brassica rapa HOM05D009403 ORTHO05D013517 2.2e-47 192.6 148 76.4
BolC3t19457H Brassica oleracea HOM05D009403 ORTHO05D013517 9.8e-40 167.2 139 77.7
C09p40630 Brassica napus HOM05D009403 ORTHO05D042064 2.0e-37 159.5 153 71.9
BolC9t56945H Brassica oleracea HOM05D009403 ORTHO05D042064 1.0e-36 157.1 140 75.7
BolC8t47242H Brassica oleracea HOM05D009403 ORTHO05D013517 4.7e-34 148.3 149 65.1
BcaC07g37076 Brassica carinata HOM05D009403 ORTHO05D039331 2.6e-32 142.5 167 61.1
BolC3t15968H Brassica oleracea HOM05D009403 ORTHO05D013517 2.6e-32 142.5 151 56.3
BcaC01g06656 Brassica carinata HOM05D009403 ORTHO05D013517 8.0e-26 120.9 78 79.5
BcaC04g20683 Brassica carinata HOM05D009403 ORTHO05D013517 2.2e-23 112.8 78 87.2
BcaC01g01814 Brassica carinata HOM05D009403 ORTHO05D013517 8.3e-23 110.9 78 76.9
BcaC06g35882 Brassica carinata HOM05D009403 ORTHO05D013517 2.4e-22 109.4 78 83.3
A08p06710 Brassica napus HOM05D009403 ORTHO05D013517 1.9e-19 99.8 66 90.9
C03p12190 Brassica napus HOM05D009403 ORTHO05D013517 1.9e-19 99.8 66 90.9
BraA04t16675Z Brassica rapa HOM05D009403 ORTHO05D013517 6.8e-17 91.3 52 88.5
C05p55820 Brassica napus HOM05D009403 ORTHO05D027531 1.3e-15 87.0 105 65.7
BcaB08g36115 Brassica carinata HOM05D009403 ORTHO05D013517 2.9e-15 85.9 59 81.4
BcaC01g01813 Brassica carinata HOM05D009403 ORTHO05D027531 3.2e-14 82.4 60 80.0
BcaC06g35881 Brassica carinata HOM05D009403 ORTHO05D000200 4.1e-14 82.0 51 90.2
BcaC05g29298 Brassica carinata HOM05D009403 ORTHO05D027531 1.0e-12 77.4 50 90.0
BolC5t34249H Brassica oleracea HOM05D009403 ORTHO05D027531 1.0e-12 77.4 50 90.0
Carub.0004s2169 Capsella rubella HOM05D000334 ORTHO05D000200 2.3e-12 76.3 57 64.9
BcaC01g05483 Brassica carinata HOM05D000334 ORTHO05D000200 5.1e-12 75.1 58 81.0
C03p26260 Brassica napus HOM05D000334 ORTHO05D000200 5.1e-12 75.1 58 81.0
BolC3t15011H Brassica oleracea HOM05D000334 ORTHO05D000200 5.1e-12 75.1 58 81.0
Thhalv10017011m.g Eutrema salsugineum HOM05D000334 ORTHO05D000200 5.1e-12 75.1 56 67.9
A03p22180 Brassica napus HOM05D000334 ORTHO05D000200 8.6e-12 74.3 58 79.3
BraA03t11450Z Brassica rapa HOM05D000334 ORTHO05D000200 8.6e-12 74.3 58 79.3
CARHR134490 Cardamine hirsuta HOM05D000334 ORTHO05D000200 1.1e-11 73.9 57 71.9
AL4G37060 Arabidopsis lyrata HOM05D000334 ORTHO05D000200 2.5e-11 72.8 57 63.2
Sp4g21910 Schrenkiella parvula HOM05D000334 ORTHO05D000200 2.5e-11 72.8 57 64.9
BcaC01g06657 Brassica carinata HOM05D009403 ORTHO05D000200 6.2e-10 68.2 50 80.0
BcaB03g11813 Brassica carinata HOM05D009403 ORTHO05D013517 5.2e-09 65.1 49 67.3
BcaB01g03833 Brassica carinata HOM05D009403 ORTHO05D013517 8.9e-09 64.3 51 62.7
THA.LOC104810030 Tarenaya hassleriana HOM05D000334 ORTHO05D000200 5.8e-08 61.6 61 54.1
Aa31LG5G20000 Aethionema arabicum HOM05D000334 ORTHO05D000200 1.3e-07 60.5 67 50.7
Atru.chr12.447 Acer truncatum HOM05D000334 ORTHO05D000200 1.4e-06 57.0 64 48.4
arahy.Tifrunner.gnm1.ann1.0GZ2Z9 Arachis hypogaea HOM05D000334 ORTHO05D000200 3.2e-06 55.8 60 45.0
arahy.Tifrunner.gnm1.ann1.EFAC5F Arachis hypogaea HOM05D000334 ORTHO05D000200 3.2e-06 55.8 60 45.0
Cpa.g.sc1.408 Carica papaya HOM05D000334 ORTHO05D000200 5.4e-06 55.1 69 43.5


User provided reference genes

Program Settings