Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p36410 Brassica napus HOM05D004054 ORTHO05D004945 6.7e-215 750.4 369 100.0
BolC3t15954H Brassica oleracea HOM05D004054 ORTHO05D004945 9.8e-198 693.3 341 100.0
C02p33030 Brassica napus HOM05D004054 ORTHO05D004945 2.8e-160 568.9 369 80.8
A05p04500 Brassica napus HOM05D004054 ORTHO05D004945 3.2e-108 396.0 199 96.5
C03p62480 Brassica napus HOM05D004054 ORTHO05D004945 3.2e-108 396.0 199 96.5
BcaB04g18970 Brassica carinata HOM05D004054 ORTHO05D004945 3.4e-89 332.8 406 51.5
Sp3g16020 Schrenkiella parvula HOM05D004054 ORTHO05D004945 5.4e-87 325.5 452 48.0
BcaC01g03722 Brassica carinata HOM05D004054 ORTHO05D004945 9.5e-84 314.7 338 58.0
BraA03t13202Z Brassica rapa HOM05D004054 ORTHO05D004945 1.0e-82 311.2 432 49.3
C03p49280 Brassica napus HOM05D004054 ORTHO05D004945 3.0e-82 309.7 431 49.0
BolC3t18505H Brassica oleracea HOM05D004054 ORTHO05D004945 3.0e-82 309.7 157 96.2
BolC3t17216H Brassica oleracea HOM05D004054 ORTHO05D004945 2.6e-81 306.6 431 48.5
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 5.7e-81 305.4 371 53.9
CARHR093230 Cardamine hirsuta HOM05D004054 ORTHO05D004945 7.5e-81 305.1 385 50.6
AT3G17900 Arabidopsis thaliana HOM05D004054 ORTHO05D004945 9.8e-81 304.7 381 51.4
Thhalv10020058m.g Eutrema salsugineum HOM05D004054 ORTHO05D004945 9.8e-81 304.7 390 50.3
AL3G31070 Arabidopsis lyrata HOM05D004054 ORTHO05D004945 2.2e-80 303.5 445 46.3
Carub.0003s1763 Capsella rubella HOM05D004054 ORTHO05D004945 3.7e-80 302.8 502 43.2
Aa31LG8G4770 Aethionema arabicum HOM05D004054 ORTHO05D004945 4.1e-79 299.3 514 43.2
BcaC09g48754 Brassica carinata HOM05D004054 ORTHO05D004945 1.5e-76 290.8 435 45.3
BraA01t03713Z Brassica rapa HOM05D004054 ORTHO05D004945 1.5e-76 290.8 362 50.8
C01p46250 Brassica napus HOM05D004054 ORTHO05D004945 1.9e-76 290.4 435 45.1
BcaB04g20809 Brassica carinata HOM05D004054 ORTHO05D004945 2.1e-75 287.0 384 49.2
BolC1t04586H Brassica oleracea HOM05D004054 ORTHO05D004945 2.8e-75 286.6 435 44.6
A01p36490 Brassica napus HOM05D004054 ORTHO05D004945 2.6e-73 280.0 363 49.9
A01p41860 Brassica napus HOM05D004054 ORTHO05D004945 2.8e-59 233.4 126 88.9
THA.LOC104820344 Tarenaya hassleriana HOM05D004054 ORTHO05D004945 1.4e-58 231.1 385 41.3
Ciclev10030693m.g Citrus clementina HOM05D004054 ORTHO05D004945 9.6e-44 181.8 394 35.5
Sabra10G0030700 Salix brachista HOM05D004054 ORTHO05D004945 3.1e-42 176.8 394 36.8
Haze_12066 Corylus avellana HOM05D004054 ORTHO05D004945 6.9e-42 175.6 397 36.3
Atru.chr11.1851 Acer truncatum HOM05D004054 ORTHO05D004945 3.4e-41 173.3 408 34.3
TWI36G0714 Tripterygium wilfordii HOM05D004054 ORTHO05D004945 4.4e-41 172.9 388 35.8
Potri.010G033900 Populus trichocarpa HOM05D004054 ORTHO05D004945 1.3e-40 171.4 394 37.1
QL03p065666 Quercus lobata HOM05D004054 ORTHO05D004945 1.3e-40 171.4 484 34.5
Cfa009037 Carpinus fangiana HOM05D004054 ORTHO05D004945 2.9e-40 170.2 399 36.1
COL.COLO4_07923 Corchorus olitorius HOM05D004054 ORTHO05D004945 3.8e-40 169.9 392 34.9
MD13G1079000 Malus domestica HOM05D004054 ORTHO05D004945 3.8e-40 169.9 388 36.3
CSS0048330 Camellia sinensis var. sinensis HOM05D004054 ORTHO05D004945 1.9e-39 167.5 400 36.0
Manes.05G096500 Manihot esculenta HOM05D004054 ORTHO05D004945 2.1e-38 164.1 391 35.8
Cpa.g.sc5.276 Carica papaya HOM05D004054 ORTHO05D004945 4.6e-38 162.9 205 48.3
TAR362G0462 Trochodendron aralioides HOM05D004054 ORTHO05D004945 6.0e-38 162.5 405 34.3
MD16G1078700 Malus domestica HOM05D004054 ORTHO05D004945 7.8e-38 162.2 386 36.3
Thecc.02G355300 Theobroma cacao HOM05D004054 ORTHO05D004945 7.8e-38 162.2 393 34.9
Duzib268G1532 Durio zibethinus HOM05D004054 ORTHO05D004945 1.3e-37 161.4 399 35.6
AUR62026254 Chenopodium quinoa HOM05D004054 ORTHO05D004945 3.0e-37 160.2 378 36.0
Nitab4.5_0009649g0020 Nicotiana tabacum HOM05D004054 ORTHO05D004945 3.9e-37 159.8 388 35.6
AUR62026447 Chenopodium quinoa HOM05D004054 ORTHO05D004945 5.1e-37 159.5 378 35.4
Prupe.1G267800 Prunus persica HOM05D004054 ORTHO05D004945 6.6e-37 159.1 391 35.3
GSVIVG01036940001 Vitis vinifera HOM05D004054 ORTHO05D004945 8.7e-37 158.7 385 35.1
RcHm_v2.0_Chr1g0353921 Rosa chinensis HOM05D004054 ORTHO05D004945 2.5e-36 157.1 391 35.3
Hund05913 Selenicereus undatus HOM05D004054 ORTHO05D004945 3.3e-36 156.8 377 32.9
Sc11g0001680 Simmondsia chinensis HOM05D004054 ORTHO05D004945 4.3e-36 156.4 381 34.9
Gorai.013G077900 Gossypium raimondii HOM05D004054 ORTHO05D004945 9.6e-36 155.2 399 33.1
Hund25271 Selenicereus undatus HOM05D004054 ORTHO05D004945 9.6e-36 155.2 391 33.2
Nitab4.5_0008717g0030 Nicotiana tabacum HOM05D004054 ORTHO05D004945 1.3e-35 154.8 388 34.5
Peaxi162Scf00209g00326 Petunia axillaris HOM05D004054 ORTHO05D004945 2.8e-35 153.7 387 35.1
Duzib248G1634 Durio zibethinus HOM05D004054 ORTHO05D004945 3.6e-35 153.3 398 32.9
Gohir.D13G068400 Gossypium hirsutum HOM05D004054 ORTHO05D004945 3.6e-35 153.3 399 33.1
Ah.03g132020 Amaranthus hybridus HOM05D004054 ORTHO05D004945 4.8e-35 152.9 197 47.7
Gohir.A13G052300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 4.8e-35 152.9 208 44.2
Gohir.D12G170300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 4.8e-35 152.9 395 33.2
Dinv24955 Davidia involucrata HOM05D004054 ORTHO05D004945 2.4e-34 150.6 204 46.1
Glyma.18G126000 Glycine max HOM05D004054 ORTHO05D004945 2.4e-34 150.6 395 35.4
Gorai.008G182900 Gossypium raimondii HOM05D004054 ORTHO05D004945 2.4e-34 150.6 395 33.2
EL10Ac6g13147 Beta vulgaris HOM05D004054 ORTHO05D004945 3.1e-34 150.2 378 33.6
Rhsim01G0215700 Rhododendron simsii HOM05D004054 ORTHO05D004945 3.1e-34 150.2 404 34.9
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla HOM05D004054 ORTHO05D004945 5.3e-34 149.4 400 34.8
Actinidia05393 Actinidia chinensis HOM05D004054 ORTHO05D004945 6.9e-34 149.1 392 33.9
MELO3C012068.2 Cucumis melo HOM05D004054 ORTHO05D004945 6.9e-34 149.1 382 33.5
Eucgr.B03410 Eucalyptus grandis HOM05D004054 ORTHO05D004945 9.0e-34 148.7 390 32.8
Phvul.003G069800 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 1.5e-33 147.9 394 34.3
RcHm_v2.0_Chr4g0440641 Rosa chinensis HOM05D004054 ORTHO05D004945 2.0e-33 147.5 391 34.3
Oeu011693.1 Olea europaea HOM05D004054 ORTHO05D004945 2.6e-33 147.1 206 44.7
Sopen05g002990 Solanum pennellii HOM05D004054 ORTHO05D004945 4.5e-33 146.4 380 32.6
CsaV3_5G032370 Cucumis sativus L. HOM05D004054 ORTHO05D004945 5.8e-33 146.0 386 34.5
Aqoxy5G00175 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 1.7e-32 144.4 389 34.4
vmacro07429 Vaccinium macrocarpon HOM05D004054 ORTHO05D004945 4.9e-32 142.9 206 45.1
FvH4_4g31960 Fragaria vesca HOM05D004054 ORTHO05D004945 6.4e-32 142.5 272 38.2
Glyma.08G296300 Glycine max HOM05D004054 ORTHO05D004945 6.4e-32 142.5 396 33.3
ECA247G4086 Erigeron canadensis HOM05D004054 ORTHO05D004945 8.4e-32 142.1 387 32.0
MBI17_g39912_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 8.4e-32 142.1 408 30.9
VMungo0251G1664 Vigna mungo HOM05D004054 ORTHO05D004945 8.4e-32 142.1 205 44.9
Gohir.A12G166800 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.1e-31 141.7 203 43.3
Lj2g0020807 Lotus japonicus HOM05D004054 ORTHO05D004945 1.9e-31 141.0 383 34.5
Sed0026408 Sechium edule HOM05D004054 ORTHO05D004945 1.9e-31 141.0 387 31.3
ClCG05G024580 Citrullus lanatus HOM05D004054 ORTHO05D004945 2.4e-31 140.6 211 41.7
FAN22G1878 Fragaria x ananassa HOM05D004054 ORTHO05D004945 3.2e-31 140.2 272 37.9
FAN12G3951 Fragaria x ananassa HOM05D004054 ORTHO05D004945 4.2e-31 139.8 272 37.9
FAN17G1509 Fragaria x ananassa HOM05D004054 ORTHO05D004945 4.2e-31 139.8 390 33.1
PSO832G3945 Papaver somniferum HOM05D004054 ORTHO05D004945 4.2e-31 139.8 405 32.3
TPR.G33257 Trifolium pratense HOM05D004054 ORTHO05D004945 4.2e-31 139.8 394 32.0
MBI11_g00106_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 7.1e-31 139.0 194 41.2
RcHm_v2.0_Chr1g0331881 Rosa chinensis HOM05D004054 ORTHO05D004945 7.1e-31 139.0 273 38.1
SalBow2G0733 Salvia bowleyana HOM05D004054 ORTHO05D004945 1.2e-30 138.3 202 42.1
SalBow2G2854 Salvia bowleyana HOM05D004054 ORTHO05D004945 1.2e-30 138.3 202 42.1
Lj4g0012636 Lotus japonicus HOM05D004054 ORTHO05D004945 1.6e-30 137.9 209 42.6
SGA_v2.0_scaffold302G47866 Striga asiatica HOM05D004054 ORTHO05D004945 1.6e-30 137.9 193 41.5
Ca_22853_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 2.1e-30 137.5 399 32.6
FAN07G1439 Fragaria x ananassa HOM05D004054 ORTHO05D004945 2.7e-30 137.1 271 36.5
Potri.008G194566 Populus trichocarpa HOM05D004054 ORTHO05D004945 4.6e-30 136.3 202 46.5
Solyc05g007030.4 Solanum lycopersicum HOM05D004054 ORTHO05D004945 6.0e-30 136.0 205 42.4
Nn3g19739 Nelumbo nucifera HOM05D004054 ORTHO05D004945 1.8e-29 134.4 206 39.8
PSO764G0096 Papaver somniferum HOM05D004054 ORTHO05D004945 1.8e-29 134.4 405 32.1
ATR0564G248 Amborella trichopoda HOM05D004054 ORTHO05D004945 6.7e-29 132.5 202 41.1
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea HOM05D004054 ORTHO05D004945 5.6e-28 129.4 205 42.0
Medtr5g038440 Medicago truncatula HOM05D004054 ORTHO05D004945 1.6e-27 127.9 185 43.2
Psat2g124400 Pisum sativum HOM05D004054 ORTHO05D004945 2.1e-27 127.5 264 36.4
MSTRG.671 Avicennia marina HOM05D004054 ORTHO05D004945 6.2e-27 125.9 204 40.7
Ca_04741_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 8.1e-27 125.6 263 36.5
Oeu028539.1 Olea europaea HOM05D004054 ORTHO05D004945 1.4e-26 124.8 211 39.8
Phvul.002G066700 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 1.8e-26 124.4 204 42.6
VMungo1215G1372 Vigna mungo HOM05D004054 ORTHO05D004945 1.8e-26 124.4 204 42.2
Medtr8g469270 Medicago truncatula HOM05D004054 ORTHO05D004945 2.4e-26 124.0 207 40.6
Psat4g132120 Pisum sativum HOM05D004054 ORTHO05D004945 2.4e-26 124.0 205 41.0
Lalb_Chr16g0392581 Lupinus albus HOM05D004054 ORTHO05D004945 5.3e-26 122.9 175 44.0
HanXRQChr12g0369801 Helianthus annuus HOM05D004054 ORTHO05D004945 6.9e-26 122.5 387 30.5
DCAR_027382 Daucus carota HOM05D004054 ORTHO05D004945 9.0e-26 122.1 390 29.7
Migut.L01344 Erythranthe guttata HOM05D004054 ORTHO05D004945 9.0e-26 122.1 205 39.0
unitig_22.g6528 Utricularia gibba HOM05D004054 ORTHO05D004945 1.2e-25 121.7 390 31.5
Lsat_1_v5_gn_8_54080 Lactuca sativa HOM05D004054 ORTHO05D004945 2.0e-25 120.9 204 41.2
Lalb_Chr09g0335271 Lupinus albus HOM05D004054 ORTHO05D004945 3.4e-25 120.2 209 39.2
PGR102G2139 Punica granatum HOM05D004054 ORTHO05D004945 5.8e-25 119.4 398 29.6
Glyma.02G021900 Glycine max HOM05D004054 ORTHO05D004945 1.3e-24 118.2 208 41.3
HPP92_011033 Vanilla planifolia HOM05D004054 ORTHO05D004945 6.5e-24 115.9 201 37.3
GSVIVG01020074001 Vitis vinifera HOM05D004054 ORTHO05D004945 5.5e-23 112.8 178 42.7
C06p17170 Brassica napus HOM05D004054 ORTHO05D004945 1.2e-22 111.7 66 78.8
CiPaw.06G080700 Carya illinoinensis HOM05D004054 ORTHO05D004945 1.2e-22 111.7 100 56.0
CDE09G0195 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 1.2e-22 111.7 188 36.7
Lalb_Chr17g0340361 Lupinus albus HOM05D004054 ORTHO05D004945 1.2e-22 111.7 368 30.2
Cc11_g13490 Coffea canephora HOM05D004054 ORTHO05D004945 3.0e-21 107.1 206 37.9
TPR.G13762 Trifolium pratense HOM05D004054 ORTHO05D004945 1.9e-20 104.4 116 50.9
Lsat_1_v5_gn_4_9281 Lactuca sativa HOM05D004054 ORTHO05D004945 4.3e-20 103.2 198 38.4
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 1.3e-19 101.7 105 50.5
CDE02G2379 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 2.1e-19 100.9 163 36.8
SEGI_39580 Sequoiadendron giganteum HOM05D004054 ORTHO05D004945 1.2e-17 95.1 216 31.5
unitig_8.g3947 Utricularia gibba HOM05D004054 ORTHO05D004945 1.0e-16 92.0 205 35.6
A06p30220 Brassica napus HOM05D003604 ORTHO05D004110 1.7e-16 91.3 60 85.0
BolC1t01529H Brassica oleracea HOM05D016765 ORTHO05D042371 5.0e-16 89.7 51 86.3
SMO119G0368 Selaginella moellendorffii HOM05D004054 ORTHO05D004945 1.9e-15 87.8 203 32.5
C08p43480 Brassica napus HOM05D004054 ORTHO05D004945 2.5e-15 87.4 71 71.8
A10p22050 Brassica napus HOM05D016765 ORTHO05D042371 4.2e-15 86.7 54 79.6
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea HOM05D004054 ORTHO05D004945 5.5e-15 86.3 184 37.0
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea HOM05D004054 ORTHO05D004945 1.2e-14 85.1 184 38.0
C08p43470 Brassica napus HOM05D016765 ORTHO05D101200 2.3e-13 80.9 46 84.8
HanXRQChr03g0092771 Helianthus annuus HOM05D004054 ORTHO05D004945 2.3e-13 80.9 176 39.2
Zm00001eb409770 Zea mays HOM05D004054 ORTHO05D004945 6.7e-13 79.3 385 28.1
Mapoly0224s0002 Marchantia polymorpha HOM05D004054 ORTHO05D004945 8.7e-13 79.0 129 34.9
AagrBONN_evm.TU.Sc2ySwM_228.4114 Anthoceros agrestis HOM05D004054 ORTHO05D004945 1.3e-11 75.1 124 37.9
ECA234G1496 Erigeron canadensis HOM05D004054 ORTHO05D004945 3.7e-11 73.6 172 33.1
BolC3t17207H Brassica oleracea HOM05D004054 ORTHO05D004945 6.9e-10 69.3 41 75.6
Zm00001eb066230 Zea mays HOM05D004054 ORTHO05D004945 9.0e-10 68.9 204 29.9
BolC2t11814H Brassica oleracea HOM05D004054 ORTHO05D004945 6.5e-08 62.8 80 51.2
BcaC08g44394 Brassica carinata HOM05D004054 ORTHO05D004945 1.4e-07 61.6 39 76.9
Pp3c16_680 Physcomitrium patens HOM05D004054 ORTHO05D004945 2.5e-07 60.8 117 34.2


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