Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 6.7e-99 364.0 183 100.0
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 1.8e-91 339.3 183 94.0
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 6.9e-27 124.8 185 38.9
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.1e-21 107.5 175 34.9
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.3e-20 104.0 170 38.2
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 4.8e-20 102.1 167 37.7
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-19 100.9 182 33.5
Aa31LG10G5760 Aethionema arabicum HOM05D008385 ORTHO05D010806 5.3e-19 98.6 182 34.6
Carub.0001s1209 Capsella rubella HOM05D008385 ORTHO05D010806 5.3e-19 98.6 181 36.5
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.3e-19 98.6 181 33.7
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.9e-19 98.2 179 33.5
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.9e-19 98.2 179 34.1
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.5e-18 97.1 179 33.5
AT1G11362 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.6e-18 96.3 171 35.1
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 3.4e-18 95.9 164 39.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 4.5e-18 95.5 171 35.7
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 5.8e-18 95.1 137 40.1
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.3e-17 94.0 180 30.6
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.3e-17 94.0 174 32.8
AT1G48010 Arabidopsis thaliana HOM05D008385 ORTHO05D001819 2.2e-17 93.2 147 37.4
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 2.2e-17 93.2 173 32.4
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.9e-17 92.8 179 33.5
Carub.0008s1111 Capsella rubella HOM05D008385 ORTHO05D010806 4.9e-17 92.0 181 34.3
Carub.0001s1211 Capsella rubella HOM05D008385 ORTHO05D010806 6.5e-17 91.7 181 37.0
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.4e-17 91.3 174 33.9
Aa31LG10G5770 Aethionema arabicum HOM05D003146 ORTHO05D001819 1.9e-16 90.1 142 34.5
Aa31LG10G5780 Aethionema arabicum HOM05D000036 ORTHO05D001038 2.5e-16 89.7 134 39.6
THA.LOC104825839 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 5.5e-16 88.6 170 35.3
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 7.1e-16 88.2 136 36.8
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 7.1e-16 88.2 174 37.9
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.2e-15 87.4 181 29.8
THA.LOC104810183 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 1.2e-15 87.4 176 34.1
THA.LOC104810184 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 1.2e-15 87.4 176 34.1
A08p33500 Brassica napus HOM05D008385 ORTHO05D010806 2.1e-15 86.7 179 33.0
BraA08t35266Z Brassica rapa HOM05D008385 ORTHO05D010806 2.1e-15 86.7 179 33.0
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 4.6e-15 85.5 168 38.1
AL1G54520 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 7.9e-15 84.7 128 39.8
THA.LOC104801632 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.0e-14 84.3 176 33.0
BolC8t49085H Brassica oleracea HOM05D008385 ORTHO05D010806 1.8e-14 83.6 183 32.8
Carub.0001s1097 Capsella rubella HOM05D008385 ORTHO05D010806 2.3e-14 83.2 172 31.4
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.3e-14 83.2 179 26.8
Carub.0008s1110 Capsella rubella HOM05D008385 ORTHO05D010806 3.9e-14 82.4 181 32.6
Thhalv10009973m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 3.9e-14 82.4 177 37.3
AT3G27999 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 6.7e-14 81.6 166 33.7
BraA02t06371Z Brassica rapa HOM05D008385 ORTHO05D001819 8.7e-14 81.3 62 66.1
C08p14420 Brassica napus HOM05D008385 ORTHO05D010806 1.1e-13 80.9 179 33.0
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 1.5e-13 80.5 163 31.3
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 1.9e-13 80.1 179 33.0
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 1.9e-13 80.1 179 33.0
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 2.5e-13 79.7 177 28.8
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 2.5e-13 79.7 179 33.0
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 3.3e-13 79.3 179 33.5
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 3.3e-13 79.3 180 28.3
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 4.3e-13 79.0 179 33.0
Carub.0001s2729 Capsella rubella HOM05D008385 ORTHO05D010806 4.3e-13 79.0 179 30.7
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 5.7e-13 78.6 179 32.4
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 5.7e-13 78.6 148 33.1
Aa31LG8G4190 Aethionema arabicum HOM05D003146 ORTHO05D001819 7.4e-13 78.2 154 31.8
AT1G50325 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 7.4e-13 78.2 179 31.8
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 7.4e-13 78.2 177 29.4
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 7.4e-13 78.2 177 29.4
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 7.4e-13 78.2 177 29.4
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 7.4e-13 78.2 177 29.4
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 9.7e-13 77.8 180 27.8
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 1.3e-12 77.4 177 29.4
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 1.6e-12 77.0 177 28.8
AT1G11593 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.2e-12 76.6 135 34.1
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 2.8e-12 76.3 180 26.7
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 3.7e-12 75.9 173 28.3
A08p15720 Brassica napus HOM05D008385 ORTHO05D010806 4.8e-12 75.5 138 39.9
AT4G03945 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 8.2e-12 74.7 166 31.9
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 8.2e-12 74.7 175 29.7
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 1.4e-11 73.9 180 26.7
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 1.8e-11 73.6 180 27.8
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 2.4e-11 73.2 154 31.8
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 2.4e-11 73.2 167 28.7
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 3.1e-11 72.8 151 34.4
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.1e-11 72.4 171 30.4
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 4.1e-11 72.4 141 29.8
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 1.5e-10 70.5 174 27.6
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-10 69.7 156 28.2
Carub.0007s3098 Capsella rubella HOM05D008385 ORTHO05D010806 3.4e-10 69.3 105 38.1
A01p37120 Brassica napus HOM05D003146 ORTHO05D001819 5.9e-10 68.6 180 27.2
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 5.9e-10 68.6 157 30.6
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 7.7e-10 68.2 134 32.8
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 1.0e-09 67.8 147 29.3
THA.LOC104802647 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.3e-09 67.4 167 31.1
COL.COLO4_24558 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.2e-09 66.6 170 27.6
Thhalv10019766m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 2.9e-09 66.2 166 33.1
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-09 65.9 174 29.3
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 3.8e-09 65.9 157 29.9
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 6.5e-09 65.1 167 28.7
PGSC0003DMG400047259 Solanum tuberosum HOM05D014661 ORTHO05D018081 6.5e-09 65.1 173 22.0
COL.COLO4_11312 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.1e-08 64.3 173 26.6
PGSC0003DMG400037953 Solanum tuberosum HOM05D014661 ORTHO05D018081 1.1e-08 64.3 173 22.0
BcaC09g50995 Brassica carinata HOM05D008385 ORTHO05D010806 1.4e-08 63.9 149 31.5
Oeu063131.1 Olea europaea HOM05D009438 ORTHO05D010870 2.5e-08 63.2 170 28.2
TWI09G0758 Tripterygium wilfordii HOM05D026721 ORTHO05D001819 2.5e-08 63.2 173 30.6
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 3.2e-08 62.8 133 28.6
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 4.2e-08 62.4 167 28.7
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 7.2e-08 61.6 173 26.0
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 9.4e-08 61.2 154 24.7
Nitab4.5_0000035g0080 Nicotiana tabacum HOM05D003146 ORTHO05D001819 9.4e-08 61.2 168 28.0
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 9.4e-08 61.2 137 29.2
COL.COLO4_04546 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.6e-07 60.5 174 25.9
BcaB04g17494 Brassica carinata HOM05D003146 ORTHO05D001819 2.1e-07 60.1 76 42.1
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 4.6e-07 58.9 175 26.9
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 6.1e-07 58.5 171 25.7
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 7.9e-07 58.2 171 27.5
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.0e-06 57.8 179 24.6
BraA01t03769Z Brassica rapa HOM05D003146 ORTHO05D001819 1.0e-06 57.8 128 28.1
BolC8t49088H Brassica oleracea HOM05D008385 ORTHO05D010806 1.4e-06 57.4 103 35.0
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 2.3e-06 56.6 147 26.5
BolC8t49089H Brassica oleracea HOM05D008385 ORTHO05D010806 3.0e-06 56.2 103 35.0
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 3.0e-06 56.2 151 25.2
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 5.1e-06 55.5 139 27.3
Oeu063129.1 Olea europaea HOM05D009438 ORTHO05D010870 5.1e-06 55.5 158 25.9
Oeu063135.1 Olea europaea HOM05D009438 ORTHO05D010870 5.1e-06 55.5 157 25.5
PGSC0003DMG400010932 Solanum tuberosum HOM05D014661 ORTHO05D018081 5.1e-06 55.5 143 23.1
PGSC0003DMG400010934 Solanum tuberosum HOM05D014661 ORTHO05D018081 5.1e-06 55.5 143 23.1
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 6.7e-06 55.1 175 28.6
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 6.7e-06 55.1 175 28.6
Oeu063127.1 Olea europaea HOM05D009438 ORTHO05D010870 6.7e-06 55.1 158 25.9
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 6.7e-06 55.1 173 26.6
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 8.8e-06 54.7 99 31.3
Thhalv10010004m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 8.8e-06 54.7 90 38.9
Oeu063123.1 Olea europaea HOM05D009438 ORTHO05D010870 8.8e-06 54.7 158 25.9


User provided reference genes

Program Settings