Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p33980 Brassica napus HOM05D002114 ORTHO05D002155 1.6e-55 219.2 111 100.0
C03p34010 Brassica napus HOM05D002114 ORTHO05D002155 1.6e-55 219.2 111 100.0
C03p33960 Brassica napus HOM05D002114 ORTHO05D002155 6.2e-55 217.2 110 99.1
C03p34000 Brassica napus HOM05D002114 ORTHO05D002155 6.2e-55 217.2 110 99.1
BolC3t15708H Brassica oleracea HOM05D002114 ORTHO05D002155 6.2e-55 217.2 110 99.1
BolC3t15709H Brassica oleracea HOM05D002114 ORTHO05D002155 6.2e-55 217.2 110 99.1
BcaC01g04768 Brassica carinata HOM05D002114 ORTHO05D002155 1.8e-54 215.7 110 98.2
BcaC01g04769 Brassica carinata HOM05D002114 ORTHO05D002155 1.8e-54 215.7 110 98.2
BcaC01g04770 Brassica carinata HOM05D002114 ORTHO05D002155 1.8e-54 215.7 110 98.2
BolC3t15712H Brassica oleracea HOM05D002114 ORTHO05D002155 4.4e-53 211.1 115 94.8
BcaC01g04764 Brassica carinata HOM05D002114 ORTHO05D002155 2.2e-52 208.8 112 96.4
BcaC01g04766 Brassica carinata HOM05D002114 ORTHO05D002155 1.7e-36 156.0 96 85.4
BcaB01g02856 Brassica carinata HOM05D002114 ORTHO05D002155 1.7e-28 129.4 118 61.9
BraA03t12024Z Brassica rapa HOM05D002114 ORTHO05D002155 4.9e-28 127.9 118 62.7
BcaC01g04761 Brassica carinata HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 63.6
BcaC01g04763 Brassica carinata HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 63.6
A03p28080 Brassica napus HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 62.7
C03p34070 Brassica napus HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 63.6
BolC3t15714H Brassica oleracea HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 63.6
BolC3t15717H Brassica oleracea HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 63.6
BraA03t12021Z Brassica rapa HOM05D002114 ORTHO05D002155 1.4e-27 126.3 118 62.7
BcaB01g02858 Brassica carinata HOM05D002114 ORTHO05D002155 1.9e-27 125.9 113 65.5
A03p28160 Brassica napus HOM05D002114 ORTHO05D002155 2.4e-27 125.6 118 61.9
Thhalv10028540m.g Eutrema salsugineum HOM05D002114 ORTHO05D002155 2.1e-26 122.5 125 60.8
BraA03t12023Z Brassica rapa HOM05D002114 ORTHO05D002155 7.9e-26 120.6 118 61.9
Sp6g09350 Schrenkiella parvula HOM05D002114 ORTHO05D002155 5.1e-25 117.9 129 58.1
BcaC01g04767 Brassica carinata HOM05D002114 ORTHO05D002155 3.4e-21 105.1 110 59.1
A03p28070 Brassica napus HOM05D002114 ORTHO05D002155 2.7e-18 95.5 80 67.5
AL6G42320 Arabidopsis lyrata HOM05D002114 ORTHO05D002155 6.0e-18 94.4 108 57.4
AT4G08510 Arabidopsis thaliana HOM05D002114 ORTHO05D002155 1.0e-17 93.6 122 54.9
CARHR259540 Cardamine hirsuta HOM05D002114 ORTHO05D002155 1.5e-16 89.7 116 50.9
BcaB01g02859 Brassica carinata HOM05D002114 ORTHO05D002155 1.9e-16 89.4 113 54.0
BolC3t15710H Brassica oleracea HOM05D002114 ORTHO05D002155 1.6e-15 86.3 42 100.0
BolC3t15711H Brassica oleracea HOM05D002114 ORTHO05D002155 2.2e-15 85.9 42 97.6
A03p28100 Brassica napus HOM05D002114 ORTHO05D002155 4.8e-15 84.7 42 97.6
AL1G51130 Arabidopsis lyrata HOM05D002114 ORTHO05D002155 2.4e-14 82.4 127 48.8
Carub.0006s2705 Capsella rubella HOM05D002114 ORTHO05D002155 2.4e-14 82.4 107 50.5
AT1G36990 Arabidopsis thaliana HOM05D002114 ORTHO05D002155 4.1e-14 81.6 128 47.7
Aa31LG6G9080 Aethionema arabicum HOM05D002114 ORTHO05D002155 2.0e-13 79.3 110 51.8
BcaB07g33990 Brassica carinata HOM05D002114 ORTHO05D002155 2.0e-13 79.3 125 47.2
Sp1g31190 Schrenkiella parvula HOM05D002114 ORTHO05D002155 2.6e-13 79.0 125 47.2
Thhalv10003900m.g Eutrema salsugineum HOM05D002114 ORTHO05D002155 7.6e-13 77.4 128 46.1
THA.LOC104813131 Tarenaya hassleriana HOM05D002114 ORTHO05D002155 1.7e-12 76.3 130 45.4
CARHR034770 Cardamine hirsuta HOM05D002114 ORTHO05D002155 5.0e-12 74.7 129 46.5
THA.LOC104806809 Tarenaya hassleriana HOM05D002114 ORTHO05D002155 8.5e-12 73.9 130 43.8
BcaB07g33077 Brassica carinata HOM05D002114 ORTHO05D002155 1.9e-11 72.8 110 48.2
THA.LOC104817001 Tarenaya hassleriana HOM05D002114 ORTHO05D002155 4.2e-11 71.6 131 45.0
Atru.chr13.1319 Acer truncatum HOM05D002114 ORTHO05D002155 1.8e-06 56.2 133 38.3
Atru.chr13.1363 Acer truncatum HOM05D002114 ORTHO05D002155 1.8e-06 56.2 133 38.3
Duzib041G0185 Durio zibethinus HOM05D002114 ORTHO05D002155 9.1e-06 53.9 125 38.4
Gorai.005G091900 Gossypium raimondii HOM05D002114 ORTHO05D002155 9.1e-06 53.9 133 34.6


User provided reference genes

Program Settings