Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 1.5e-183 646.0 318 100.0
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 2.6e-167 592.0 315 94.3
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 2.6e-162 575.5 289 97.9
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 9.7e-162 573.5 283 99.3
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 5.3e-160 567.8 294 95.2
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 4.7e-156 554.7 283 95.8
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.7e-150 536.2 283 91.9
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 2.1e-148 529.3 279 91.8
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 4.7e-148 528.1 281 91.8
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.4e-147 526.6 283 91.5
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.3e-147 525.8 286 90.9
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 3.0e-147 525.4 283 89.4
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 3.7e-145 518.5 285 88.1
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 1.1e-144 516.9 284 87.7
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 6.6e-142 507.7 276 88.8
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 6.1e-140 501.1 285 85.3
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.0e-139 500.4 285 85.3
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.0e-139 500.4 278 86.3
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 4.0e-139 498.4 280 84.3
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 5.0e-134 481.5 276 81.9
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 1.5e-133 479.9 282 80.5
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 4.3e-133 478.4 273 82.4
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 4.3e-133 478.4 282 81.9
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 5.6e-133 478.0 275 82.9
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 5.6e-133 478.0 282 81.9
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 7.3e-133 477.6 287 82.2
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 6.2e-132 474.6 276 81.9
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 6.2e-132 474.6 281 79.7
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 8.0e-132 474.2 280 79.3
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 8.0e-132 474.2 281 79.4
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.1e-131 473.8 279 80.6
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.4e-131 473.4 280 81.4
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.4e-131 473.4 275 81.5
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 1.8e-131 473.0 280 81.1
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 3.1e-131 472.2 281 79.4
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 3.1e-131 472.2 281 79.0
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 3.1e-131 472.2 279 81.4
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 4.0e-131 471.9 281 79.4
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 5.2e-131 471.5 281 80.4
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 6.8e-131 471.1 281 80.1
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 8.9e-131 470.7 273 81.3
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.5e-130 469.9 275 81.5
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.0e-130 469.5 280 79.3
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 2.0e-130 469.5 294 76.5
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 2.6e-130 469.2 275 80.7
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 3.4e-130 468.8 277 79.1
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 4.4e-130 468.4 273 82.1
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 5.8e-130 468.0 278 76.6
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 7.5e-130 467.6 273 81.3
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 7.5e-130 467.6 279 80.3
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 7.5e-130 467.6 273 81.7
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 7.5e-130 467.6 306 74.2
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 9.8e-130 467.2 278 77.0
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 9.8e-130 467.2 278 77.0
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 1.7e-129 466.5 279 78.5
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 1.7e-129 466.5 279 79.9
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 2.2e-129 466.1 277 79.4
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 2.9e-129 465.7 279 79.9
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 2.9e-129 465.7 279 79.2
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.7e-129 465.3 300 75.0
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 3.7e-129 465.3 282 78.0
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 4.9e-129 464.9 285 78.9
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 6.4e-129 464.5 277 79.8
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 6.4e-129 464.5 277 79.8
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 8.3e-129 464.2 277 80.1
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 1.1e-128 463.8 273 76.9
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 1.9e-128 463.0 279 78.1
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 3.2e-128 462.2 273 80.6
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 7.0e-128 461.1 276 78.3
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.2e-127 460.3 306 73.9
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 1.2e-127 460.3 283 76.0
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 1.6e-127 459.9 273 76.9
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 3.5e-127 458.8 279 79.2
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 3.5e-127 458.8 278 76.6
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 6.0e-127 458.0 273 80.2
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 7.8e-127 457.6 279 78.1
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.3e-126 456.8 279 78.1
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 1.7e-126 456.4 278 75.2
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 1.7e-126 456.4 278 75.2
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 2.3e-126 456.1 278 74.8
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 3.9e-126 455.3 279 75.6
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 5.0e-126 454.9 267 81.3
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 5.6e-125 451.4 280 77.9
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.4e-123 446.8 275 77.8
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 2.3e-123 446.0 284 76.1
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 3.1e-123 445.7 315 69.2
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 3.1e-123 445.7 278 78.1
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 9.9e-122 440.7 301 78.1
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.3e-121 440.3 277 75.8
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 2.2e-121 439.5 281 75.4
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.4e-120 436.8 277 74.4
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.9e-120 436.4 254 81.1
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.9e-120 436.4 274 78.1
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 9.2e-120 434.1 280 73.2
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 7.8e-119 431.0 278 72.3
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 8.6e-118 427.6 281 73.0
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.5e-117 426.8 315 66.0
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 1.9e-117 426.4 298 71.1
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 7.3e-117 424.5 273 74.0
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.4e-115 419.5 278 71.6
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 2.0e-114 416.4 284 71.8
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 3.8e-113 412.1 277 70.4
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 8.4e-113 411.0 215 92.6
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 2.7e-111 406.0 238 80.3
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 4.6e-111 405.2 276 70.7
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 7.8e-111 404.4 305 66.2
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 3.0e-110 402.5 280 69.3
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.1e-107 394.0 241 77.2
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 9.0e-107 391.0 366 56.8
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 2.2e-105 386.3 214 86.4
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 8.7e-102 374.4 221 79.6
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.6e-100 369.0 280 61.1
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.4e-99 367.1 278 65.1
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 6.7e-94 348.2 199 81.4
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 6.2e-92 341.7 286 57.7
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.0e-90 336.7 190 82.6
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 2.2e-89 333.2 274 59.5
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.9e-85 320.1 223 70.9
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 2.0e-82 310.1 189 76.2
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 2.0e-82 310.1 189 76.2
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.7e-81 307.0 227 67.4
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 1.8e-78 297.0 228 62.7
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 2.2e-76 290.0 282 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 8.5e-65 251.5 185 65.9
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.1e-64 251.1 297 48.8
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 3.9e-62 242.7 156 76.3
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 1.1e-61 241.1 151 71.5
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.2e-58 231.1 214 51.4
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 4.2e-56 222.6 131 77.1
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.1e-55 220.3 265 47.2
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 2.2e-44 183.7 241 46.9
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 1.8e-38 164.1 276 38.8
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 4.0e-38 162.9 141 62.4
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 9.8e-37 158.3 213 41.3
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 4.9e-28 129.4 107 61.7
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 5.4e-27 125.9 88 68.2
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 2.3e-14 84.0 67 61.2
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 5.8e-13 79.3 46 82.6
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 7.5e-13 79.0 45 82.2


User provided reference genes

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