Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 6.3e-121 438.0 275 100.0
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-112 409.1 272 95.2
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.6e-111 406.8 272 94.5
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 7.8e-111 404.4 275 86.9
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 3.0e-110 402.5 272 93.8
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-109 400.2 274 88.7
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 7.8e-95 351.3 260 89.2
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.9e-94 349.0 260 88.5
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 7.3e-93 344.7 260 87.7
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 1.6e-71 273.9 226 85.4
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 8.7e-70 268.1 227 83.7
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 4.8e-68 262.3 217 88.5
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 6.2e-68 261.9 215 87.9
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 3.8e-65 252.7 216 80.6
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-60 237.7 212 77.8
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-60 237.7 284 57.7
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 1.5e-58 230.7 215 81.4
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 7.1e-56 221.9 202 84.7
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 1.1e-53 214.5 183 64.5
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 9.7e-53 211.5 183 63.4
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-52 211.1 279 50.5
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.2e-52 210.3 272 48.9
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 2.8e-52 209.9 175 66.3
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.0e-50 203.8 185 63.2
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.0e-49 201.4 185 62.7
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-49 201.1 189 61.9
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-49 200.7 180 61.7
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 2.9e-49 199.9 184 62.5
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-48 197.6 193 59.1
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 9.4e-48 194.9 180 60.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.6e-47 193.0 193 58.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-46 191.4 155 67.1
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-46 189.9 155 67.1
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 3.0e-46 189.9 185 56.8
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-46 189.5 182 57.7
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 9.7e-45 184.9 154 65.6
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 9.7e-45 184.9 152 66.4
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 3.7e-44 183.0 135 73.3
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 3.7e-44 183.0 138 68.1
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 6.3e-44 182.2 104 92.3
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 6.3e-44 182.2 177 57.1
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-44 182.2 181 56.9
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-43 180.3 156 64.1
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 3.1e-43 179.9 176 59.1
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 4.1e-43 179.5 178 58.4
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-42 177.9 171 56.7
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 7.7e-42 175.3 178 57.9
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-40 171.4 153 61.4
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-40 170.2 140 64.3
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.2e-39 167.9 120 71.7
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-38 162.2 148 58.1
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 7.4e-37 158.7 168 54.2
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 3.1e-35 153.3 170 80.6
BcaC04g20468 Brassica carinata HOM05D007203 ORTHO05D094473 9.1e-35 151.8 134 91.0
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-34 151.0 113 68.1
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-34 150.2 179 49.7
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 4.5e-34 149.4 164 52.4
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-34 149.4 139 59.7
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 3.8e-33 146.4 158 81.6
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 3.8e-33 146.4 158 81.6
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 8.5e-33 145.2 154 85.1
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-33 145.2 150 55.3
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-32 143.7 116 65.5
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 7.2e-32 142.1 183 48.1
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 2.1e-31 140.6 102 78.4
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-31 139.8 148 52.0
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 4.7e-31 139.4 162 79.6
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 3.0e-30 136.7 178 49.4
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 5.2e-30 136.0 149 53.0
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-29 134.4 172 45.9
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 7.4e-29 132.1 137 53.3
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-28 131.3 134 53.0
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 1.3e-28 131.3 138 52.9
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.7e-28 131.0 98 76.5
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 3.1e-27 126.7 187 41.7
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 7.7e-26 122.1 81 76.5
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 2.5e-24 117.1 148 48.0
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 2.5e-24 117.1 148 48.0
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.2e-24 116.7 193 43.5
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-23 114.4 73 78.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-23 114.0 76 75.0
C09p61810 Brassica napus HOM05D007203 ORTHO05D041948 3.6e-23 113.2 155 76.1
BolC9t59019H Brassica oleracea HOM05D007203 ORTHO05D041948 3.6e-23 113.2 155 76.1
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 1.4e-22 111.3 135 46.7
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.8e-22 110.9 160 45.6
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 3.0e-22 110.2 122 49.2
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 3.0e-22 110.2 122 49.2
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 4.0e-22 109.8 121 49.6
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 8.8e-22 108.6 122 47.5
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 1.2e-21 108.2 118 50.0
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 2.6e-21 107.1 121 49.6
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-20 104.8 139 45.3
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 1.1e-19 101.7 138 46.4
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 5.4e-19 99.4 164 40.9
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 5.4e-19 99.4 133 45.9
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 9.1e-19 98.6 90 56.7
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.0e-17 95.1 59 78.0
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 2.9e-17 93.6 151 58.9
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 8.5e-17 92.0 85 52.9
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-16 91.7 85 52.9
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-16 90.9 85 52.9
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 4.2e-16 89.7 85 51.8
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-15 88.2 71 59.2
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 2.7e-15 87.0 228 42.1
A08p11280 Brassica napus HOM05D007203 ORTHO05D042169 4.7e-15 86.3 124 79.0
BraA08t33124Z Brassica rapa HOM05D007203 ORTHO05D042169 4.7e-15 86.3 124 79.0
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 2.6e-13 80.5 135 42.2
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 4.4e-13 79.7 39 94.9
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 4.4e-13 79.7 150 41.3
BcaB04g19551 Brassica carinata HOM05D007203 ORTHO05D008395 7.5e-13 79.0 111 50.5
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.3e-12 78.2 94 50.0
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 2.8e-12 77.0 66 63.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 4.9e-12 76.3 129 39.5
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-12 76.3 48 72.9
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 4.9e-12 76.3 107 41.1
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 6.3e-12 75.9 48 72.9
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-11 74.3 48 70.8
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 2.7e-10 70.5 77 51.9
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 3.5e-10 70.1 94 47.9
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 5.9e-10 69.3 88 50.0
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 5.9e-10 69.3 88 50.0
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 5.9e-10 69.3 91 47.3
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 1.3e-09 68.2 149 35.6
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-09 67.4 87 47.1
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 3.8e-09 66.6 81 50.6
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 6.6e-09 65.9 77 51.9
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 8.6e-09 65.5 113 36.3
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-08 65.1 116 36.2
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 2.5e-08 63.9 83 48.2
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 2.5e-08 63.9 138 44.2
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-08 63.9 55 50.9
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-08 63.5 78 50.0
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 4.2e-08 63.2 73 52.1
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 5.6e-08 62.8 119 40.3
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 7.2e-08 62.4 176 30.1
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 9.5e-08 62.0 57 57.9
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 9.5e-08 62.0 36 86.1
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 9.5e-08 62.0 57 57.9
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-07 61.2 39 74.4
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 2.8e-07 60.5 68 51.5
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 4.7e-07 59.7 72 50.0
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 4.7e-07 59.7 82 48.8
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 4.7e-07 59.7 39 69.2
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 6.1e-07 59.3 138 44.2
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 6.1e-07 59.3 66 47.0
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 1.4e-06 58.2 155 29.7
BraA01t02487Z Brassica rapa HOM05D008062 ORTHO05D008395 1.4e-06 58.2 47 53.2
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 2.3e-06 57.4 156 32.1
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-06 57.4 70 50.0
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 3.0e-06 57.0 75 48.0
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 3.0e-06 57.0 69 47.8
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 4.0e-06 56.6 38 68.4
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 4.0e-06 56.6 73 47.9
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-06 56.2 39 66.7
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 5.2e-06 56.2 50 58.0
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 6.8e-06 55.8 133 54.9
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 6.8e-06 55.8 82 46.3


User provided reference genes

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