Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 3.4e-280 967.6 467 100.0
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 3.8e-279 964.1 467 99.6
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 3.8e-279 964.1 467 99.6
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 8.7e-276 953.0 467 98.1
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 9.9e-272 939.5 498 92.2
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 8.1e-266 919.8 467 96.1
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.2e-247 858.6 469 90.2
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 6.9e-241 837.0 469 87.6
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.9e-238 828.9 471 86.8
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.2e-237 826.2 472 86.0
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 2.6e-235 818.5 472 85.2
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.1e-230 803.1 426 91.3
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 3.8e-223 778.1 450 82.4
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 3.7e-202 708.4 463 75.2
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.6e-197 693.0 468 73.3
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 2.3e-196 689.1 468 71.4
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 8.9e-196 687.2 468 71.2
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 9.8e-195 683.7 468 70.9
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.7e-194 682.9 474 69.8
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 8.3e-194 680.6 493 69.4
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 2.4e-193 679.1 469 71.6
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.6e-192 676.4 471 70.9
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 4.6e-192 674.9 469 70.6
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 6.0e-192 674.5 472 70.3
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.7e-191 672.9 469 71.4
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 2.3e-191 672.5 471 69.6
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.1e-190 670.2 480 68.8
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.2e-189 666.8 471 69.6
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.6e-189 666.4 471 69.4
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 2.1e-189 666.0 468 69.9
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 6.2e-189 664.5 467 70.2
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 8.0e-189 664.1 467 70.2
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 3.1e-188 662.1 438 71.2
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 3.1e-188 662.1 475 68.6
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.0e-188 661.8 471 68.8
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.0e-188 661.8 476 68.9
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 7.5e-187 657.5 453 70.0
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 9.8e-187 657.1 481 67.2
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 8.3e-186 654.1 433 71.8
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.0e-183 647.1 473 66.8
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 5.1e-183 644.8 471 67.9
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 8.6e-183 644.0 437 70.3
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 2.5e-182 642.5 450 69.1
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.2e-181 640.2 471 67.7
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 2.8e-181 639.0 434 70.0
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.1e-180 637.1 388 76.5
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 2.3e-180 636.0 472 65.5
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.3e-180 636.0 438 68.7
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 5.8e-179 631.3 431 70.5
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 1.1e-177 627.1 429 68.3
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.4e-177 625.9 429 70.2
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 4.1e-177 625.2 428 69.4
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 5.4e-177 624.8 397 75.6
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 1.2e-176 623.6 429 69.0
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 2.1e-176 622.9 433 69.3
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.0e-176 621.3 429 69.2
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.0e-175 620.5 440 67.7
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.3e-175 620.2 403 73.7
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.7e-175 619.8 463 65.7
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.7e-175 619.8 402 73.1
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 6.6e-175 617.8 429 69.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.5e-174 616.7 427 68.9
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 1.9e-174 616.3 448 66.3
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 2.5e-174 615.9 428 68.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 9.6e-174 614.0 431 68.0
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.2e-173 613.6 435 68.0
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.2e-173 613.6 459 66.0
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.6e-173 613.2 427 68.4
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 2.8e-173 612.5 364 78.3
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 8.1e-173 610.9 425 68.9
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 1.1e-172 610.5 427 68.4
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 2.4e-172 609.4 434 67.3
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 3.1e-172 609.0 438 67.1
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 8.9e-172 607.4 368 77.7
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 5.8e-171 604.7 432 65.5
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 3.8e-170 602.1 395 72.2
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.6e-168 596.7 432 65.5
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 3.5e-168 595.5 462 63.6
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.1e-166 590.5 498 59.8
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.1e-166 590.5 389 70.2
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 4.8e-165 585.1 396 69.7
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 8.1e-165 584.3 434 64.1
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 7.6e-163 577.8 463 64.1
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.3e-162 577.0 385 71.7
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 1.7e-159 566.6 428 65.2
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 3.3e-158 562.4 462 59.1
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 1.5e-155 553.5 447 62.2
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 2.6e-155 552.7 483 57.8
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.8e-154 548.9 469 57.8
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 1.6e-152 543.5 482 58.5
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.9e-150 536.6 399 65.2
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.1e-148 530.8 334 75.7
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 5.0e-138 495.4 453 55.2
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 6.5e-138 495.0 370 63.5
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 8.2e-125 451.4 430 53.7
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.4e-119 434.1 437 51.7
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 3.0e-103 379.8 212 84.9
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.6e-99 367.5 327 58.4
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 2.5e-97 360.1 454 42.7
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 4.7e-96 355.9 384 46.6
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 3.7e-93 346.3 259 69.5
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.5e-89 334.3 435 43.2
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.1e-84 318.2 217 72.4
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 5.6e-81 305.8 263 58.6
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 2.3e-79 300.4 158 89.2
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 8.6e-74 282.0 321 49.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.3e-57 226.5 147 73.5
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 5.6e-57 226.1 242 47.9
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-39 168.7 254 42.1
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.0e-39 166.8 128 63.3
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.4e-28 131.7 123 54.5
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 4.6e-27 126.7 80 77.5
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.9e-25 121.3 76 75.0
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 9.0e-23 112.5 67 77.6
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.7e-21 108.2 133 45.1
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.8e-18 98.2 128 37.5
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.8e-18 98.2 88 60.2
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 4.3e-17 93.6 130 42.3
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 1.8e-07 61.6 118 35.6


User provided reference genes

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