Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p33210 Brassica napus HOM05D000812 ORTHO05D012268 7.4e-28 126.3 57 100.0
BcaC02g07707 Brassica carinata HOM05D000812 ORTHO05D000672 2.5e-12 74.7 38 94.7
A04p26940 Brassica napus HOM05D000812 ORTHO05D000672 2.5e-12 74.7 38 94.7
C04p64330 Brassica napus HOM05D000812 ORTHO05D000672 2.5e-12 74.7 38 94.7
BraA04t18193Z Brassica rapa HOM05D000812 ORTHO05D000672 2.5e-12 74.7 38 94.7
BolC4t27920H Brassica oleracea HOM05D000812 ORTHO05D000672 5.7e-12 73.6 38 92.1
C01p20910 Brassica napus HOM05D000812 ORTHO05D012268 1.7e-11 72.0 38 89.5
BolC2t11173H Brassica oleracea HOM05D000812 ORTHO05D012268 1.7e-11 72.0 38 92.1
BcaC09g50781 Brassica carinata HOM05D000812 ORTHO05D012268 6.3e-11 70.1 37 89.2
BolC1t02018H Brassica oleracea HOM05D000812 ORTHO05D012268 6.3e-11 70.1 37 89.2
BcaC01g00295 Brassica carinata HOM05D000812 ORTHO05D012268 5.3e-10 67.0 38 86.8
C03p77990 Brassica napus HOM05D000812 ORTHO05D012268 5.3e-10 67.0 38 86.8
BcaC09g49365 Brassica carinata HOM05D000812 ORTHO05D012268 6.9e-10 66.6 41 85.4
BcaC03g16338 Brassica carinata HOM05D000812 ORTHO05D012268 1.2e-09 65.9 39 87.2
C02p41630 Brassica napus HOM05D000812 ORTHO05D012268 1.2e-09 65.9 39 87.2
BolC3t20060H Brassica oleracea HOM05D000812 ORTHO05D012268 5.9e-09 63.5 45 75.6
C02p50860 Brassica napus HOM05D000812 ORTHO05D012268 7.7e-09 63.2 45 75.6
BolC8t47212H Brassica oleracea HOM05D000812 ORTHO05D012268 7.7e-09 63.2 45 73.3
Sp4g17730 Schrenkiella parvula HOM05D000812 ORTHO05D000672 1.7e-08 62.0 38 81.6
Thhalv10016444m.g Eutrema salsugineum HOM05D000812 ORTHO05D000672 5.0e-08 60.5 38 78.9
BcaC02g11656 Brassica carinata HOM05D000812 ORTHO05D000672 6.5e-08 60.1 38 76.3
C04p12670 Brassica napus HOM05D000812 ORTHO05D000672 6.5e-08 60.1 38 76.3
BolC4t22915H Brassica oleracea HOM05D000812 ORTHO05D000672 6.5e-08 60.1 38 76.3
BraA05t19962Z Brassica rapa HOM05D000812 ORTHO05D000672 1.1e-07 59.3 38 76.3
BcaB06g28846 Brassica carinata HOM05D000812 ORTHO05D000672 1.9e-07 58.5 36 80.6
A05p10220 Brassica napus HOM05D000812 ORTHO05D000672 4.2e-07 57.4 37 75.7
AL4G31560 Arabidopsis lyrata HOM05D000812 ORTHO05D000672 2.7e-06 54.7 38 65.8
CARHR129660 Cardamine hirsuta HOM05D000812 ORTHO05D012268 6.1e-06 53.5 38 68.4


User provided reference genes

Program Settings