Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 0.0e+00 1079.3 540 100.0
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 5.3e-309 1063.5 540 98.7
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 1.8e-304 1048.5 541 97.4
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 2.3e-304 1048.1 541 97.2
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 1.0e-267 926.4 542 88.2
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 1.3e-267 926.0 544 86.4
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 4.4e-255 884.4 547 82.6
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 3.7e-254 881.3 545 82.6
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 2.8e-246 855.1 545 80.6
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 2.9e-243 845.1 546 80.4
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 1.6e-241 839.3 547 80.1
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 1.6e-241 839.3 544 80.1
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 2.1e-241 839.0 548 79.4
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 1.8e-240 835.9 545 80.0
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 4.4e-239 831.2 550 78.4
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 3.9e-227 791.6 545 77.2
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 8.9e-224 780.4 492 80.5
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 3.7e-222 775.0 509 79.6
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 1.1e-213 746.9 548 71.9
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 1.6e-180 636.7 556 61.0
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 6.0e-180 634.8 551 61.3
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 5.1e-179 631.7 551 61.3
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 2.8e-177 625.9 552 59.8
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 2.8e-177 625.9 556 60.3
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 2.4e-176 622.9 558 60.2
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 2.0e-175 619.8 558 59.9
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 2.0e-175 619.8 558 59.9
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 1.3e-174 617.1 553 58.8
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 1.1e-173 614.0 556 61.3
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 7.2e-173 611.3 555 59.8
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 9.3e-173 610.9 550 60.4
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 2.7e-172 609.4 556 58.6
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 2.7e-172 609.4 571 57.8
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 3.0e-171 605.9 546 59.2
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 1.5e-170 603.6 547 58.9
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 5.7e-170 601.7 558 57.3
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 1.4e-168 597.0 559 59.0
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 2.4e-168 596.3 556 56.5
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 3.1e-168 595.9 547 57.6
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 5.3e-168 595.1 566 56.9
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 1.2e-167 594.0 560 57.7
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 2.0e-167 593.2 564 58.5
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 2.2e-166 589.7 551 58.3
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 3.8e-166 589.0 553 57.9
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 2.7e-164 582.8 553 56.1
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 4.7e-164 582.0 544 57.9
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 7.9e-164 581.3 542 58.3
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 1.8e-163 580.1 548 57.5
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 1.8e-163 580.1 547 57.6
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 2.3e-163 579.7 542 57.9
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 6.7e-163 578.2 549 57.2
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 8.8e-163 577.8 552 56.9
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 4.4e-162 575.5 552 56.3
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 9.7e-162 574.3 549 56.8
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 2.2e-161 573.2 549 56.6
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 2.8e-161 572.8 554 56.9
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 9.1e-160 567.8 552 56.0
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 2.6e-159 566.2 544 55.5
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 5.9e-159 565.1 555 56.4
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.1e-157 560.8 548 54.7
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 4.2e-157 558.9 546 55.7
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 9.4e-157 557.8 556 55.8
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 3.6e-156 555.8 524 57.3
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 3.0e-155 552.7 555 54.1
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 5.2e-155 552.0 542 55.7
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 8.8e-155 551.2 542 55.7
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 1.1e-154 550.8 542 55.7
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 7.4e-154 548.1 554 54.5
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 1.3e-153 547.4 578 54.5
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 4.8e-153 545.4 571 53.8
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 8.2e-153 544.7 546 53.8
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 1.1e-152 544.3 563 53.5
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 1.1e-152 544.3 549 52.1
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 2.4e-152 543.1 563 52.9
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 2.6e-151 539.7 559 53.5
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 3.5e-151 539.3 567 54.3
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 5.9e-151 538.5 560 53.8
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 1.0e-150 537.7 552 54.0
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 1.0e-150 537.7 553 53.9
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 1.7e-150 537.0 551 53.7
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 2.2e-150 536.6 562 53.4
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 2.2e-150 536.6 551 54.6
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 5.0e-150 535.4 610 51.3
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 1.1e-149 534.3 543 53.4
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 3.2e-149 532.7 553 53.3
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 3.6e-148 529.3 572 52.8
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 3.3e-146 522.7 541 52.9
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 8.2e-145 518.1 580 50.2
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.4e-144 517.3 552 53.8
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 2.7e-143 513.1 574 52.6
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.7e-143 513.1 547 51.2
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 1.3e-142 510.8 543 51.6
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 3.8e-142 509.2 625 47.0
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 5.0e-142 508.8 582 50.2
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 5.5e-141 505.4 481 55.1
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 1.0e-139 501.1 486 55.1
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 2.3e-139 500.0 471 54.6
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 2.3e-139 500.0 540 50.0
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 7.5e-138 495.0 550 49.8
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 7.0e-136 488.4 560 49.6
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.0e-135 486.9 561 47.1
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 1.7e-134 483.8 485 55.9
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 6.5e-134 481.9 609 46.0
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 4.7e-132 475.7 498 53.6
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 2.6e-130 469.9 508 49.8
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 4.9e-129 465.7 514 50.0
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 4.9e-129 465.7 565 46.9
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 8.3e-129 464.9 508 49.6
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 2.4e-128 463.4 468 53.0
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 7.0e-128 461.8 548 47.1
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 8.6e-126 454.9 526 50.8
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 2.1e-124 450.3 490 49.4
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 2.2e-121 440.3 558 47.8
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 7.0e-120 435.3 547 45.9
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 1.5e-117 427.6 460 54.3
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 2.1e-116 423.7 557 46.1
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 2.6e-114 416.8 519 44.9
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 7.5e-114 415.2 445 50.8
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.3e-110 404.4 460 50.9
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.9e-109 400.6 528 41.5
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.8e-107 394.0 594 40.2
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.8e-107 394.0 594 40.2
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.4e-106 389.8 573 40.0
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 9.9e-106 388.3 520 42.5
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 1.7e-105 387.5 320 62.5
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 6.4e-105 385.6 500 46.0
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 1.9e-104 384.0 498 43.2
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 4.9e-97 359.4 553 40.1
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 1.8e-91 340.9 307 59.9
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 3.0e-86 323.6 412 48.1
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 9.6e-85 318.5 357 48.2
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 2.5e-77 293.9 708 32.1
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.8e-76 290.4 592 33.8
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 5.5e-72 276.2 166 74.1
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.6e-71 274.6 646 32.4
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 7.9e-71 272.3 168 75.6
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 1.1e-69 268.5 462 39.8
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 3.5e-63 246.9 398 43.7
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 1.4e-48 198.4 256 48.4
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 2.2e-44 184.5 186 47.8
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 3.1e-43 180.6 197 54.3
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 1.5e-37 161.8 99 70.7
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 9.7e-37 159.1 275 39.6
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 1.7e-36 158.3 160 56.9
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 5.5e-32 143.3 173 51.4
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 1.2e-31 142.1 140 60.0
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 1.6e-31 141.7 165 49.7
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 1.0e-30 139.0 159 51.6
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 7.0e-27 126.3 94 67.0
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.2e-25 121.3 128 53.1
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 8.5e-25 119.4 180 36.7
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 2.7e-23 114.4 166 35.5
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 2.4e-19 101.3 68 64.7
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 3.3e-16 90.9 104 45.2
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 4.2e-16 90.5 103 50.5
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 7.8e-10 69.7 39 79.5
Cre13.g585651 Chlamydomonas reinhardtii HOM05D004583 ORTHO05D005469 6.1e-07 60.1 115 36.5


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