Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p32220 Brassica napus HOM05D005445 ORTHO05D021819 1.1e-60 236.5 122 100.0
BcaC04g22417 Brassica carinata HOM05D005445 ORTHO05D021819 2.0e-59 232.3 122 98.4
C09p19590 Brassica napus HOM05D005445 ORTHO05D021819 2.0e-59 232.3 122 98.4
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 1.0e-55 219.9 117 97.4
BcaC01g04908 Brassica carinata HOM05D005445 ORTHO05D021819 1.2e-35 153.3 82 97.6
A03p30090 Brassica napus HOM05D005445 ORTHO05D021819 4.9e-13 78.2 43 90.7
A05p41450 Brassica napus HOM05D005445 ORTHO05D021819 4.9e-13 78.2 43 90.7
A01p27190 Brassica napus HOM05D011299 ORTHO05D017640 6.0e-11 71.2 66 56.1
BraA01t02859Z Brassica rapa HOM05D011299 ORTHO05D017640 6.0e-11 71.2 66 56.1
BraA01t03201Z Brassica rapa HOM05D011299 ORTHO05D017640 3.3e-09 65.5 73 50.7
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-09 64.3 45 64.4
C01p42250 Brassica napus HOM05D025705 ORTHO05D027381 1.3e-08 63.5 94 37.2
BcaC03g14596 Brassica carinata HOM05D032440 ORTHO05D032102 2.1e-08 62.8 80 47.5
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 8.1e-08 60.8 65 52.3
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 8.1e-08 60.8 43 65.1
BcaC02g09372 Brassica carinata HOM05D028298 ORTHO05D027269 1.1e-07 60.5 93 47.3
BcaC02g08295 Brassica carinata HOM05D014693 ORTHO05D039701 1.4e-07 60.1 82 46.3
C02p45530 Brassica napus HOM05D011859 ORTHO05D016713 2.4e-07 59.3 61 49.2
C03p49010 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-07 58.9 65 50.8
A06p22960 Brassica napus HOM05D011859 ORTHO05D016713 4.0e-07 58.5 56 51.8
C05p38510 Brassica napus HOM05D011859 ORTHO05D016713 4.0e-07 58.5 61 49.2
BraA03t10781Z Brassica rapa HOM05D011859 ORTHO05D016713 4.0e-07 58.5 56 51.8
BcaC04g20871 Brassica carinata HOM05D011859 ORTHO05D024455 6.9e-07 57.8 83 49.4
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-07 57.8 37 70.3
C09p38340 Brassica napus HOM05D011859 ORTHO05D024455 6.9e-07 57.8 83 49.4
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-07 57.8 37 70.3
C06p00750 Brassica napus HOM05D011859 ORTHO05D016713 9.0e-07 57.4 61 49.2
BolC6t35217H Brassica oleracea HOM05D011859 ORTHO05D016713 9.0e-07 57.4 61 49.2
BraA01t03801Z Brassica rapa HOM05D000467 ORTHO05D000379 9.0e-07 57.4 59 54.2
BcaC01g03291 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-06 56.6 121 35.5
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-06 56.6 35 74.3
BolC3t17675H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-06 56.6 121 35.5
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-06 56.6 41 63.4
C03p74070 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.2 97 41.2
C02p38600 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-06 55.5 127 38.6
C03p73870 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-06 55.5 88 42.0
BraA07t29991Z Brassica rapa HOM05D000313 ORTHO05D000065 3.4e-06 55.5 40 65.0
BraA07t31324Z Brassica rapa HOM05D000313 ORTHO05D000065 3.4e-06 55.5 40 65.0
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-06 54.7 121 34.7
A03p56440 Brassica napus HOM05D011859 ORTHO05D024455 5.8e-06 54.7 89 40.4
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-06 54.7 73 38.4
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-06 54.3 41 61.0
C08p20130 Brassica napus HOM05D011859 ORTHO05D024455 7.6e-06 54.3 90 40.0
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-06 54.3 41 61.0
BcaC05g28021 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-05 53.9 52 50.0
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-05 53.9 75 41.3
BolC2t09877H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-05 53.9 127 37.8
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-05 53.9 75 41.3
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-05 53.9 76 36.8


User provided reference genes

Program Settings