Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 1.7e-207 725.7 357 100.0
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 2.1e-136 489.6 262 93.9
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 2.3e-127 459.5 267 85.0
BolC3t15496H Brassica oleracea HOM05D015892 ORTHO05D009842 2.2e-77 293.5 146 100.0
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 1.5e-73 280.8 262 55.7
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 6.8e-71 271.9 262 55.3
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 1.3e-58 231.1 179 64.8
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 1.3e-42 177.9 113 70.8
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 2.4e-39 167.2 143 55.2
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 2.9e-29 133.7 110 62.7
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 2.7e-27 127.1 265 30.9
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 6.0e-27 125.9 263 31.2
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 5.6e-25 119.4 264 30.3
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 6.2e-24 115.9 131 38.9
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 9.0e-23 112.1 124 41.1
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 2.0e-22 110.9 194 33.0
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 1.3e-21 108.2 255 30.6
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 2.9e-21 107.1 254 29.5
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 2.9e-21 107.1 124 40.3
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 6.5e-21 105.9 149 38.3
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-20 104.4 263 29.3
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 3.3e-17 93.6 126 38.1
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 5.7e-17 92.8 126 38.1
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.3e-16 91.7 126 34.9
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-16 91.7 126 35.7
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.3e-16 91.7 126 35.7
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.6e-16 91.3 126 33.3
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 2.2e-16 90.9 126 32.5
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 3.7e-16 90.1 122 37.7
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 6.3e-16 89.4 126 34.1
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 6.3e-16 89.4 126 34.1
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 6.3e-16 89.4 126 33.3
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.1e-15 88.6 128 35.2
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.4e-15 88.2 126 34.1
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 1.8e-15 87.8 126 34.1
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 3.1e-15 87.0 130 30.0
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 3.1e-15 87.0 130 30.0
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 4.1e-15 86.7 97 44.3
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 5.3e-15 86.3 126 34.1
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 6.9e-15 85.9 126 36.5
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 9.0e-15 85.5 130 29.2
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 1.2e-14 85.1 126 31.0
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 1.2e-14 85.1 120 34.2
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 1.5e-14 84.7 113 38.1
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 1.5e-14 84.7 145 32.4
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 1.5e-14 84.7 145 32.4
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.0e-14 84.3 131 34.4
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 2.6e-14 84.0 126 31.7
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 2.6e-14 84.0 126 32.5
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 2.6e-14 84.0 126 31.7
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 2.6e-14 84.0 126 32.5
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 4.5e-14 83.2 149 28.9
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 4.5e-14 83.2 126 31.0
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 5.9e-14 82.8 130 32.3
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 5.9e-14 82.8 126 28.6
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 7.6e-14 82.4 126 28.6
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 7.6e-14 82.4 129 33.3
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.0e-13 82.0 126 33.3
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.0e-13 82.0 126 32.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.0e-13 82.0 126 33.3
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 1.7e-13 81.3 126 30.2
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-13 81.3 126 33.3
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-13 81.3 126 32.5
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-13 81.3 126 32.5
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.7e-13 81.3 126 34.9
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.7e-13 81.3 126 32.5
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 2.2e-13 80.9 126 32.5
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 2.9e-13 80.5 136 31.6
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 2.9e-13 80.5 129 34.1
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 3.8e-13 80.1 126 31.0
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 5.0e-13 79.7 126 30.2
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 6.5e-13 79.3 95 32.6
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 6.5e-13 79.3 217 26.7
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.9e-12 77.8 126 34.1
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 1.9e-12 77.8 115 32.2
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 1.9e-12 77.8 126 34.1
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 3.2e-12 77.0 129 32.6
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 4.2e-12 76.6 126 31.7
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 4.2e-12 76.6 126 31.7
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 4.2e-12 76.6 126 31.7
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 4.2e-12 76.6 126 34.1
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 4.2e-12 76.6 126 31.7
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 9.3e-12 75.5 126 30.2
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 9.3e-12 75.5 126 31.7
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 1.2e-11 75.1 124 26.6
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 1.2e-11 75.1 126 29.4
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 1.2e-11 75.1 107 30.8
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 2.1e-11 74.3 129 32.6
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 2.1e-11 74.3 126 33.3
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 3.6e-11 73.6 128 31.2
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 4.6e-11 73.2 131 29.8
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 4.6e-11 73.2 136 30.1
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 4.6e-11 73.2 78 39.7
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 6.1e-11 72.8 118 29.7
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 6.1e-11 72.8 126 30.2
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 6.1e-11 72.8 126 28.6
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 7.9e-11 72.4 107 32.7
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 7.9e-11 72.4 107 32.7
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.3e-10 71.6 131 29.8
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.3e-10 71.6 131 29.8
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 1.3e-10 71.6 131 29.8
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 1.8e-10 71.2 131 29.8
A04p08410 Brassica napus HOM05D000057 ORTHO05D009842 1.8e-10 71.2 127 38.6
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 1.8e-10 71.2 126 27.0
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 2.3e-10 70.9 126 28.6
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 3.0e-10 70.5 129 32.6
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 3.9e-10 70.1 126 27.0
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 3.9e-10 70.1 108 32.4
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 3.9e-10 70.1 126 33.3
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 3.9e-10 70.1 126 33.3
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 3.9e-10 70.1 128 28.9
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 3.9e-10 70.1 126 33.3
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 5.1e-10 69.7 126 29.4
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 6.7e-10 69.3 93 35.5
A01p27450 Brassica napus HOM05D015892 ORTHO05D009842 8.8e-10 68.9 74 51.4
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 8.8e-10 68.9 122 29.5
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 8.8e-10 68.9 122 29.5
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 8.8e-10 68.9 126 27.0
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 8.8e-10 68.9 126 27.8
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 8.8e-10 68.9 87 35.6
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 8.8e-10 68.9 122 29.5
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.1e-09 68.6 126 32.5
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 1.1e-09 68.6 126 32.5
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 1.5e-09 68.2 90 40.0
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-09 67.8 93 35.5
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 1.9e-09 67.8 131 29.0
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 1.9e-09 67.8 126 29.4
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 1.9e-09 67.8 95 31.6
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 1.9e-09 67.8 110 33.6
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 3.3e-09 67.0 130 30.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-09 67.0 126 29.4
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 3.3e-09 67.0 126 29.4
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 4.3e-09 66.6 126 34.1
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 7.4e-09 65.9 131 27.5
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 9.7e-09 65.5 126 29.4
BcaB01g02360 Brassica carinata HOM05D015892 ORTHO05D009842 1.7e-08 64.7 77 48.1
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 1.7e-08 64.7 107 29.9
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 2.2e-08 64.3 126 30.2
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 2.8e-08 63.9 94 36.2
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 2.8e-08 63.9 89 33.7
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 3.7e-08 63.5 103 34.0
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 4.8e-08 63.2 80 41.2
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 4.8e-08 63.2 126 31.7
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 4.8e-08 63.2 105 31.4
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 4.8e-08 63.2 97 33.0
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-07 62.0 131 34.4
A06p26790 Brassica napus HOM05D005627 ORTHO05D021837 1.8e-07 61.2 105 26.7
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 1.8e-07 61.2 87 32.2
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 2.4e-07 60.8 95 31.6
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 4.1e-07 60.1 126 27.8
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 5.3e-07 59.7 108 28.7
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 9.1e-07 58.9 128 27.3
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 3.4e-06 57.0 126 29.4
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 3.4e-06 57.0 73 28.8
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 5.9e-06 56.2 118 28.8
BolC5t32399H Brassica oleracea HOM05D008838 ORTHO05D021837 7.7e-06 55.8 73 28.8


User provided reference genes

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