Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 5.7e-77 290.8 143 100.0
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 4.1e-67 258.1 143 93.0
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 1.4e-30 136.7 131 59.5
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 4.0e-30 135.2 133 60.9
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 8.9e-30 134.0 133 58.6
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 2.0e-29 132.9 132 60.6
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 2.6e-29 132.5 131 59.5
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 2.2e-28 129.4 131 57.3
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 6.4e-28 127.9 132 56.1
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 3.2e-27 125.6 132 59.8
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 3.2e-27 125.6 132 59.8
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 2.7e-26 122.5 134 54.5
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 2.3e-25 119.4 128 56.2
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.3e-25 119.4 113 62.8
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.1e-23 112.8 134 53.0
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 2.8e-23 112.5 128 53.1
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 4.7e-23 111.7 133 48.9
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 4.7e-23 111.7 128 51.6
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 8.0e-23 110.9 131 55.7
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.4e-22 110.2 133 50.4
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.8e-22 109.8 112 54.5
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 1.8e-22 109.8 133 49.6
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 2.3e-22 109.4 130 50.8
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 4.0e-22 108.6 129 50.4
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.5e-21 106.7 125 51.2
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 1.5e-21 106.7 135 45.9
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 2.6e-21 105.9 112 53.6
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 3.4e-21 105.5 131 50.4
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 3.4e-21 105.5 130 49.2
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 7.5e-21 104.4 107 56.1
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 7.5e-21 104.4 107 56.1
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 7.5e-21 104.4 128 50.0
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.3e-20 103.6 133 46.6
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 2.2e-20 102.8 147 44.2
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.2e-20 102.8 111 51.4
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 2.9e-20 102.4 127 51.2
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 2.9e-20 102.4 111 53.2
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 3.7e-20 102.1 129 50.4
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 3.7e-20 102.1 112 51.8
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 6.4e-20 101.3 134 47.0
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 8.3e-20 100.9 113 52.2
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 8.3e-20 100.9 125 49.6
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 8.3e-20 100.9 126 50.0
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.1e-19 100.5 108 53.7
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 1.1e-19 100.5 126 46.0
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 1.1e-19 100.5 107 52.3
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 1.4e-19 100.1 111 51.4
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 1.4e-19 100.1 123 51.2
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 1.9e-19 99.8 107 54.2
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 1.9e-19 99.8 111 53.2
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 2.4e-19 99.4 108 53.7
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 2.4e-19 99.4 133 45.1
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 3.2e-19 99.0 132 51.5
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 3.2e-19 99.0 112 52.7
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 3.2e-19 99.0 128 48.4
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 3.2e-19 99.0 128 48.4
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 3.2e-19 99.0 133 45.1
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 3.2e-19 99.0 112 50.9
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 3.2e-19 99.0 131 48.1
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 4.1e-19 98.6 131 46.6
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 4.1e-19 98.6 107 54.2
BcaC01g05022 Brassica carinata HOM05D001496 ORTHO05D007453 5.4e-19 98.2 53 92.5
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 5.4e-19 98.2 126 49.2
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 7.0e-19 97.8 131 46.6
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 1.6e-18 96.7 133 46.6
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 1.6e-18 96.7 123 48.0
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.6e-18 96.7 135 48.1
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 2.1e-18 96.3 107 54.2
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.1e-18 96.3 107 51.4
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.0e-18 94.7 131 45.8
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 6.0e-18 94.7 112 49.1
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.8e-18 94.4 131 45.8
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.8e-18 94.4 131 45.8
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 7.8e-18 94.4 131 45.8
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 7.8e-18 94.4 110 50.0
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.3e-17 93.6 112 50.0
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.3e-17 93.6 131 45.8
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 1.7e-17 93.2 111 50.5
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.3e-17 92.8 130 46.2
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 3.0e-17 92.4 104 52.9
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.0e-17 92.4 131 45.8
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.0e-17 91.7 131 45.0
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.0e-17 91.7 110 50.9
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 8.6e-17 90.9 104 51.0
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 1.1e-16 90.5 126 45.2
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.1e-16 90.5 107 46.7
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 1.5e-16 90.1 104 50.0
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 2.5e-16 89.4 97 51.5
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 2.5e-16 89.4 67 62.7
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.5e-16 89.4 112 48.2
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 2.5e-16 89.4 110 50.0
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 2.5e-16 89.4 65 66.2
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 3.3e-16 89.0 105 50.5
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 3.3e-16 89.0 110 50.0
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 3.3e-16 89.0 129 45.7
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 5.6e-16 88.2 111 48.6
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 9.5e-16 87.4 67 67.2
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 9.5e-16 87.4 179 37.4
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.6e-15 86.7 65 66.2
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 1.6e-15 86.7 106 44.3
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 2.8e-15 85.9 105 49.5
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 8.1e-15 84.3 115 43.5
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.1e-14 84.0 105 48.6
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.1e-14 84.0 105 48.6
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 4.0e-14 82.0 104 50.0
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 1.2e-13 80.5 111 45.0
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 3.4e-13 79.0 74 55.4
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 5.8e-13 78.2 110 44.5
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 7.5e-13 77.8 144 41.0
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.7e-12 76.6 155 41.3
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 2.2e-12 76.3 67 56.7
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 2.2e-12 76.3 110 46.4
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.9e-12 75.9 144 41.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 5.4e-11 71.6 68 52.9
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 3.5e-10 68.9 88 46.6
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 3.3e-08 62.4 95 37.9
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 3.3e-08 62.4 69 47.8
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 8.1e-07 57.8 79 46.8
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 4.0e-06 55.5 79 45.6
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 6.8e-06 54.7 30 80.0


User provided reference genes

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