Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05047 Brassica carinata HOM05D008602 ORTHO05D012039 1.3e-120 436.4 217 100.0
C03p30770 Brassica napus HOM05D008602 ORTHO05D012039 1.3e-120 436.4 217 100.0
BolC3t15427H Brassica oleracea HOM05D008602 ORTHO05D012039 1.3e-120 436.4 217 100.0
BraA03t11797Z Brassica rapa HOM05D008602 ORTHO05D012039 2.8e-120 435.3 217 99.5
A03p25830 Brassica napus HOM05D008602 ORTHO05D012039 6.3e-120 434.1 217 99.1
BcaB06g29463 Brassica carinata HOM05D008602 ORTHO05D012039 2.7e-107 392.1 215 90.2
A04p34790 Brassica napus HOM05D008602 ORTHO05D012039 1.5e-105 386.3 217 88.0
BraA04t18934Z Brassica rapa HOM05D008602 ORTHO05D012039 1.5e-105 386.3 217 88.0
Sp4g29040 Schrenkiella parvula HOM05D008602 ORTHO05D012039 2.6e-105 385.6 215 87.4
C04p72560 Brassica napus HOM05D008602 ORTHO05D012039 6.3e-104 380.9 217 87.1
BolC4t28744H Brassica oleracea HOM05D008602 ORTHO05D012039 6.3e-104 380.9 217 87.1
Thhalv10001629m.g Eutrema salsugineum HOM05D008602 ORTHO05D012039 6.3e-104 380.9 215 86.0
A05p00750 Brassica napus HOM05D008602 ORTHO05D012039 1.4e-103 379.8 215 87.9
AT2G47050 Arabidopsis thaliana HOM05D008602 ORTHO05D012039 5.4e-103 377.9 215 85.6
BraA05t19079Z Brassica rapa HOM05D008602 ORTHO05D012039 9.1e-103 377.1 215 87.0
AL4G46550 Arabidopsis lyrata HOM05D008602 ORTHO05D012039 3.5e-102 375.2 215 85.1
BcaC02g09027 Brassica carinata HOM05D008602 ORTHO05D012039 3.5e-102 375.2 215 86.5
C04p00910 Brassica napus HOM05D008602 ORTHO05D012039 3.5e-102 375.2 215 86.5
BolC4t21729H Brassica oleracea HOM05D008602 ORTHO05D012039 3.5e-102 375.2 215 86.5
CARHR142410 Cardamine hirsuta HOM05D008602 ORTHO05D012039 5.0e-101 371.3 215 84.7
Carub.0004s2979 Capsella rubella HOM05D008602 ORTHO05D012039 8.5e-101 370.5 215 83.3
Aa31LG1G28390 Aethionema arabicum HOM05D008602 ORTHO05D012039 3.7e-88 328.6 215 73.5
BraA07t30237Z Brassica rapa HOM05D008602 ORTHO05D013475 3.4e-65 252.3 217 60.8
A07p25900 Brassica napus HOM05D008602 ORTHO05D013475 5.8e-65 251.5 217 60.4
C06p28150 Brassica napus HOM05D008602 ORTHO05D013475 1.9e-63 246.5 217 59.9
BolC6t37981H Brassica oleracea HOM05D008602 ORTHO05D013475 1.9e-63 246.5 217 59.9
THA.LOC104827651 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 9.2e-63 244.2 227 58.6
THA.LOC104802122 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 6.0e-62 241.5 225 56.9
Sp5g01200 Schrenkiella parvula HOM05D008602 ORTHO05D013475 1.0e-61 240.7 219 58.9
CARHR172520 Cardamine hirsuta HOM05D008602 ORTHO05D013475 1.3e-61 240.4 219 60.3
THA.LOC104817438 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 1.7e-61 240.0 224 55.8
Thhalv10006384m.g Eutrema salsugineum HOM05D008602 ORTHO05D013475 3.9e-61 238.8 217 58.1
AL5G44930 Arabidopsis lyrata HOM05D008602 ORTHO05D013475 8.6e-61 237.7 218 58.3
AT3G62180 Arabidopsis thaliana HOM05D008602 ORTHO05D013475 3.3e-60 235.7 216 57.9
BolC8t51290H Brassica oleracea HOM05D008602 ORTHO05D013475 3.4e-57 225.7 216 56.0
BcaC07g40710 Brassica carinata HOM05D008602 ORTHO05D013475 4.4e-57 225.3 216 56.0
A09p54250 Brassica napus HOM05D008602 ORTHO05D013475 5.8e-57 224.9 216 55.6
BraA09t40837Z Brassica rapa HOM05D008602 ORTHO05D013475 5.8e-57 224.9 216 55.6
C08p37120 Brassica napus HOM05D008602 ORTHO05D013475 9.9e-57 224.2 216 55.6
BraA04t15789Z Brassica rapa HOM05D008602 ORTHO05D024467 1.7e-56 223.4 202 57.9
A04p00700 Brassica napus HOM05D008602 ORTHO05D024467 4.9e-56 221.9 202 57.4
BcaC07g40708 Brassica carinata HOM05D008602 ORTHO05D013475 1.4e-55 220.3 218 54.1
BcaC02g10283 Brassica carinata HOM05D008602 ORTHO05D024467 5.4e-55 218.4 201 56.2
C04p30790 Brassica napus HOM05D008602 ORTHO05D024467 5.4e-55 218.4 201 56.2
BolC4t24598H Brassica oleracea HOM05D008602 ORTHO05D024467 1.6e-54 216.9 202 56.4
Carub.0005s2891 Capsella rubella HOM05D008602 ORTHO05D013475 1.7e-53 213.4 219 53.4
Aa31LG10G16140 Aethionema arabicum HOM05D000036 ORTHO05D000441 1.9e-52 209.9 198 57.6
BcaB02g07346 Brassica carinata HOM05D008602 ORTHO05D013475 7.6e-49 198.0 217 50.7
BcaB02g08120 Brassica carinata HOM05D000703 ORTHO05D000633 3.3e-28 129.4 143 50.3
A09p54240 Brassica napus HOM05D000036 ORTHO05D000441 1.4e-15 87.4 164 28.7
BraA09t40836Z Brassica rapa HOM05D000036 ORTHO05D000441 1.4e-15 87.4 164 28.7
Carub.0004s2978 Capsella rubella HOM05D000036 ORTHO05D000441 2.5e-15 86.7 203 27.1
A05p00770 Brassica napus HOM05D000036 ORTHO05D000441 3.2e-15 86.3 203 26.1
BraA05t19080Z Brassica rapa HOM05D000036 ORTHO05D000441 3.2e-15 86.3 203 26.1
A04p34780 Brassica napus HOM05D000036 ORTHO05D000441 5.5e-15 85.5 189 28.6
C04p72550 Brassica napus HOM05D000036 ORTHO05D000441 5.5e-15 85.5 189 28.6
BolC4t28743H Brassica oleracea HOM05D000036 ORTHO05D000441 5.5e-15 85.5 189 28.6
BraA04t18933Z Brassica rapa HOM05D000036 ORTHO05D000441 5.5e-15 85.5 189 28.6
BcaB06g29464 Brassica carinata HOM05D000036 ORTHO05D000441 7.2e-15 85.1 163 30.1
BcaC07g40707 Brassica carinata HOM05D000036 ORTHO05D000441 7.2e-15 85.1 164 28.0
C08p37110 Brassica napus HOM05D000036 ORTHO05D000441 7.2e-15 85.1 164 28.0
BolC8t51289H Brassica oleracea HOM05D000036 ORTHO05D000441 9.4e-15 84.7 164 27.4
AT2G47040 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 1.6e-14 84.0 203 26.1
Sp4g29030 Schrenkiella parvula HOM05D000036 ORTHO05D000441 3.6e-14 82.8 203 25.6
Thhalv10005855m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 4.6e-14 82.4 164 28.0
Carub.0004s2977 Capsella rubella HOM05D000036 ORTHO05D000441 6.1e-14 82.0 189 28.0
BcaB01g03192 Brassica carinata HOM05D000036 ORTHO05D000441 1.0e-13 81.3 204 27.5
Thhalv10001369m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 1.0e-13 81.3 189 27.0
AL5G44920 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 1.4e-13 80.9 164 28.7
Carub.0005s2890 Capsella rubella HOM05D000036 ORTHO05D000441 1.4e-13 80.9 164 28.0
BcaB02g07347 Brassica carinata HOM05D000036 ORTHO05D000441 1.8e-13 80.5 164 28.0
C06p28140 Brassica napus HOM05D000036 ORTHO05D000441 3.0e-13 79.7 164 28.0
BolC6t37980H Brassica oleracea HOM05D000036 ORTHO05D000441 3.0e-13 79.7 164 28.0
CARHR142400 Cardamine hirsuta HOM05D000036 ORTHO05D000441 3.0e-13 79.7 202 26.7
BcaC02g10282 Brassica carinata HOM05D000036 ORTHO05D000441 3.9e-13 79.3 193 26.4
A04p00710 Brassica napus HOM05D000036 ORTHO05D000441 3.9e-13 79.3 193 26.4
A07p25890 Brassica napus HOM05D000036 ORTHO05D000441 3.9e-13 79.3 164 27.4
C04p30810 Brassica napus HOM05D000036 ORTHO05D000441 3.9e-13 79.3 193 26.4
BolC4t24601H Brassica oleracea HOM05D000036 ORTHO05D000441 3.9e-13 79.3 193 26.4
BraA07t30236Z Brassica rapa HOM05D000036 ORTHO05D000441 3.9e-13 79.3 164 27.4
C04p00930 Brassica napus HOM05D000036 ORTHO05D000441 5.1e-13 79.0 203 25.6
BolC4t21731H Brassica oleracea HOM05D000036 ORTHO05D000441 5.1e-13 79.0 203 25.6
AT2G47030 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 6.7e-13 78.6 189 27.5
Sp5g01210 Schrenkiella parvula HOM05D000036 ORTHO05D000441 6.7e-13 78.6 191 25.7
AL4G46540 Arabidopsis lyrata HOM05D008602 ORTHO05D000441 8.8e-13 78.2 198 26.8
AT3G62170 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 8.8e-13 78.2 164 28.0
BcaB02g08121 Brassica carinata HOM05D000036 ORTHO05D000441 8.8e-13 78.2 193 26.9
BraA04t15791Z Brassica rapa HOM05D000036 ORTHO05D000441 8.8e-13 78.2 193 25.9
BcaC01g05049 Brassica carinata HOM05D000036 ORTHO05D000441 2.6e-12 76.6 204 27.0
C03p30760 Brassica napus HOM05D000036 ORTHO05D000441 2.6e-12 76.6 204 27.0
CARHR172510 Cardamine hirsuta HOM05D000036 ORTHO05D000441 2.6e-12 76.6 164 26.2
BolC3t15426H Brassica oleracea HOM05D000036 ORTHO05D000441 4.4e-12 75.9 204 27.0
A03p25820 Brassica napus HOM05D000036 ORTHO05D000441 7.4e-12 75.1 204 27.0
BraA03t11796Z Brassica rapa HOM05D000036 ORTHO05D000441 7.4e-12 75.1 204 27.0
Cpa.g.sc41.94 Carica papaya HOM05D000036 ORTHO05D000441 3.7e-11 72.8 194 21.6
THA.LOC104817436 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 1.2e-09 67.8 180 27.2
Sabra01G0161400 Salix brachista HOM05D000036 ORTHO05D000441 1.5e-09 67.4 201 24.9
THA.LOC104802121 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 7.7e-09 65.1 178 25.8
Glyma.10G136900 Glycine max HOM05D000036 ORTHO05D000441 2.5e-07 60.1 186 24.7
Aa31LG1G28380 Aethionema arabicum HOM05D002601 ORTHO05D002884 1.6e-06 57.4 188 23.9
Lj5g0002768 Lotus japonicus HOM05D000036 ORTHO05D000441 2.7e-06 56.6 168 25.6
Manes.07G013500 Manihot esculenta HOM05D000036 ORTHO05D000441 3.6e-06 56.2 195 24.1


User provided reference genes

Program Settings