Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p28390 Brassica napus HOM05D000253 ORTHO05D099956 5.9e-61 237.3 114 100.0
BcaB06g29260 Brassica carinata HOM05D000253 ORTHO05D000149 1.1e-25 120.2 117 59.0
Sp4g24830 Schrenkiella parvula HOM05D000253 ORTHO05D000149 3.1e-25 118.6 117 58.1
A04p32350 Brassica napus HOM05D000253 ORTHO05D000149 2.0e-24 115.9 117 58.1
C04p69860 Brassica napus HOM05D000253 ORTHO05D000149 3.4e-24 115.2 117 58.1
BraA04t18688Z Brassica rapa HOM05D000253 ORTHO05D000149 7.6e-24 114.0 117 57.3
CARHR057610 Cardamine hirsuta HOM05D000253 ORTHO05D000149 1.3e-23 113.2 117 56.4
AT2G42690 Arabidopsis thaliana HOM05D000253 ORTHO05D000149 4.9e-23 111.3 117 58.1
Thhalv10016724m.g Eutrema salsugineum HOM05D000253 ORTHO05D000149 6.4e-23 110.9 119 55.5
AL4G41240 Arabidopsis lyrata HOM05D000253 ORTHO05D000149 2.4e-22 109.0 117 57.3
Carub.0004s2513 Capsella rubella HOM05D000253 ORTHO05D000149 3.2e-22 108.6 117 56.4
Aa31LG1G24470 Aethionema arabicum HOM05D000253 ORTHO05D000149 1.9e-11 72.8 91 46.2
THA.LOC104802961 Tarenaya hassleriana HOM05D000253 ORTHO05D000149 3.3e-11 72.0 114 42.1
BcaC02g07224 Brassica carinata HOM05D000253 ORTHO05D000149 5.8e-08 61.2 34 88.2
BolC4t28486H Brassica oleracea HOM05D000253 ORTHO05D000149 5.8e-08 61.2 34 88.2
Haze_13407 Corylus avellana HOM05D000253 ORTHO05D000149 5.8e-08 61.2 136 33.8
Ciclev10015386m.g Citrus clementina HOM05D000253 ORTHO05D000149 7.6e-08 60.8 111 37.8
Manes.10G077100 Manihot esculenta HOM05D000253 ORTHO05D000149 2.2e-07 59.3 109 36.7
Thecc.01G152500 Theobroma cacao HOM05D000253 ORTHO05D000149 3.8e-07 58.5 85 38.8
CiPaw.04G133800 Carya illinoinensis HOM05D000253 ORTHO05D000149 8.4e-07 57.4 100 38.0
AUR62024066 Chenopodium quinoa HOM05D000253 ORTHO05D000149 8.4e-07 57.4 95 36.8
ECA240G0761 Erigeron canadensis HOM05D000253 ORTHO05D000149 8.4e-07 57.4 106 35.8
Dinv07698 Davidia involucrata HOM05D000253 ORTHO05D000149 1.4e-06 56.6 134 32.8
Nn1g09161 Nelumbo nucifera HOM05D000253 ORTHO05D000149 2.4e-06 55.8 105 35.2
QL08p042065 Quercus lobata HOM05D000253 ORTHO05D000149 2.4e-06 55.8 109 37.6
MSTRG.6785 Avicennia marina HOM05D000253 ORTHO05D000149 4.2e-06 55.1 107 37.4
CiPaw.04G133700 Carya illinoinensis HOM05D000253 ORTHO05D000149 4.2e-06 55.1 85 38.8
AUR62041739 Chenopodium quinoa HOM05D000253 ORTHO05D000149 4.2e-06 55.1 95 35.8
HanXRQChr04g0095501 Helianthus annuus HOM05D000253 ORTHO05D000149 4.2e-06 55.1 98 35.7
Lj8A100T100 Lonicera japonica HOM05D000253 ORTHO05D000149 4.2e-06 55.1 121 34.7
CANSAT64G2978 Cannabis sativa HOM05D000253 ORTHO05D000149 5.5e-06 54.7 97 35.1
Hund07802 Selenicereus undatus HOM05D000253 ORTHO05D000149 5.5e-06 54.7 102 34.3
VMungo1127G0895 Vigna mungo HOM05D000253 ORTHO05D000149 5.5e-06 54.7 106 34.0
CiPaw.03G194500 Carya illinoinensis HOM05D000253 ORTHO05D000149 7.1e-06 54.3 101 38.6
Gohir.A10G154300 Gossypium hirsutum HOM05D000253 ORTHO05D000149 7.1e-06 54.3 85 37.6
Gohir.D10G111700 Gossypium hirsutum HOM05D000253 ORTHO05D000149 7.1e-06 54.3 85 37.6
Gorai.011G123300 Gossypium raimondii HOM05D000253 ORTHO05D000149 7.1e-06 54.3 85 37.6


User provided reference genes

Program Settings