Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 1.2e-55 219.5 110 100.0
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 6.3e-52 207.2 109 92.7
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 6.3e-52 207.2 110 91.8
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 5.8e-45 184.1 111 84.7
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 9.8e-45 183.3 109 84.4
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 4.4e-37 157.9 111 72.1
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 9.8e-37 156.8 111 73.0
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 3.3e-32 141.7 111 67.6
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 4.3e-32 141.4 113 67.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 8.9e-30 133.7 112 67.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 2.6e-29 132.1 113 62.8
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.6e-21 105.5 97 58.8
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 7.6e-21 104.0 97 56.7
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 2.2e-20 102.4 97 56.7
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 3.8e-20 101.7 111 54.1
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.1e-19 100.1 95 55.8
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.1e-19 100.1 95 55.8
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 1.9e-19 99.4 107 51.4
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 4.1e-19 98.2 108 49.1
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 9.2e-19 97.1 112 51.8
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.6e-18 96.3 112 51.8
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 3.5e-18 95.1 111 51.4
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 6.0e-18 94.4 110 51.8
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.0e-17 93.6 89 56.2
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 1.0e-17 93.6 109 51.4
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.3e-17 92.4 92 53.3
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 3.9e-17 91.7 109 52.3
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 5.1e-17 91.3 109 48.6
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 6.6e-17 90.9 96 52.1
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.1e-16 90.1 97 50.5
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 2.5e-16 89.0 121 46.3
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 3.3e-16 88.6 111 49.5
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 4.3e-16 88.2 110 49.1
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 5.6e-16 87.8 111 46.8
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 5.6e-16 87.8 105 46.7
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 5.6e-16 87.8 97 52.6
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 7.3e-16 87.4 102 48.0
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 1.2e-15 86.7 111 45.0
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 1.6e-15 86.3 111 46.8
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 1.6e-15 86.3 103 47.6
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 2.1e-15 85.9 113 47.8
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 2.1e-15 85.9 88 50.0
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 2.8e-15 85.5 93 50.5
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 4.7e-15 84.7 85 54.1
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 6.2e-15 84.3 111 45.9
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 6.2e-15 84.3 97 48.5
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 8.1e-15 84.0 108 46.3
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 1.1e-14 83.6 109 45.0
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 1.8e-14 82.8 88 51.1
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 2.4e-14 82.4 110 50.0
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 4.0e-14 81.6 110 46.4
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 6.9e-14 80.9 109 45.9
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 6.9e-14 80.9 110 47.3
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 6.9e-14 80.9 85 52.9
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 9.0e-14 80.5 85 55.3
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 2.0e-13 79.3 110 49.1
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 3.4e-13 78.6 94 48.9
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 5.8e-13 77.8 119 45.4
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 2.2e-12 75.9 104 48.1
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 2.9e-12 75.5 108 46.3
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 4.9e-12 74.7 113 45.1
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 1.4e-11 73.2 83 51.8
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 4.2e-11 71.6 91 49.5
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 6.0e-10 67.8 95 44.2
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.6e-09 64.3 85 47.1
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.6e-09 64.3 85 47.1
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 5.6e-08 61.2 92 42.4
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 3.6e-07 58.5 90 43.3
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 6.2e-07 57.8 90 40.0
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 2.4e-06 55.8 90 42.2


User provided reference genes

Program Settings