Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p27190 Brassica napus HOM05D003503 ORTHO05D003885 5.7e-136 488.0 337 100.0
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 1.2e-56 224.6 109 96.3
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 2.2e-31 140.6 117 63.2
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 5.0e-31 139.4 115 64.3
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 1.1e-27 128.3 221 41.2
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 2.6e-27 127.1 112 60.7
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 5.3e-25 119.4 114 57.9
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 4.2e-22 109.8 126 52.4
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 5.2e-20 102.8 122 51.6
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 9.7e-19 98.6 115 51.3
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 7.0e-17 92.4 121 48.8
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 4.5e-16 89.7 115 46.1
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 3.8e-15 86.7 128 42.2
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 3.8e-15 86.7 115 46.1
C04p28740 Brassica napus HOM05D003503 ORTHO05D003885 8.5e-15 85.5 85 55.3
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.0e-12 77.0 122 39.3
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 4.0e-12 76.6 123 39.0
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 1.5e-11 74.7 122 38.5
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 2.0e-11 74.3 121 39.7
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 2.6e-11 73.9 126 36.5
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 3.7e-10 70.1 115 37.4
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 1.4e-09 68.2 118 38.1
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 9.1e-09 65.5 109 34.9
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 9.1e-09 65.5 109 34.9
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 9.1e-09 65.5 109 34.9
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 3.5e-08 63.5 101 37.6
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 5.9e-08 62.8 109 38.5
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 5.9e-08 62.8 109 38.5
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 4.2e-06 56.6 115 38.3
BolC3t15100H Brassica oleracea HOM05D003503 ORTHO05D003885 9.5e-06 55.5 81 67.9


User provided reference genes

Program Settings