Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 5.9e-141 504.2 260 100.0
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 5.9e-141 504.2 260 100.0
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 1.9e-139 499.2 260 99.2
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.4e-41 173.3 238 45.8
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 3.2e-38 162.9 175 53.7
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 7.2e-38 161.8 183 49.2
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 9.4e-38 161.4 224 46.0
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 1.2e-37 161.0 224 46.0
Thhalv10003384m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 2.1e-37 160.2 275 42.2
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.1e-37 160.2 267 43.8
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 2.7e-37 159.8 224 46.0
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 6.8e-36 155.2 263 42.6
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.3e-34 151.0 224 44.6
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.7e-34 150.6 206 47.6
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 2.2e-34 150.2 202 47.5
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 2.8e-34 149.8 257 39.7
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 3.7e-34 149.4 264 41.3
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 3.7e-34 149.4 264 41.3
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 5.9e-32 142.1 266 39.5
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.0e-31 141.4 133 59.4
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 8.6e-31 138.3 184 45.7
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 5.5e-30 135.6 232 39.2
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 5.5e-30 135.6 230 41.3
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 5.5e-30 135.6 230 41.3
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 6.1e-29 132.1 230 40.9
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 1.4e-28 131.0 223 41.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 5.2e-28 129.0 230 41.3
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-27 127.9 197 42.1
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.7e-27 125.6 180 42.8
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.1e-25 119.8 173 42.8
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.1e-25 119.4 197 39.6
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 5.9e-24 115.5 200 39.5
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.8e-24 115.2 185 41.1
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 7.8e-24 115.2 208 40.4
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.0e-23 114.8 175 42.3
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.0e-23 114.8 254 37.0
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 2.3e-23 113.6 205 39.0
Aa31LG7G1540 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.0e-23 112.5 184 42.9
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.6e-23 112.1 212 35.8
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.6e-23 111.7 177 41.8
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 3.3e-22 109.8 168 39.3
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 3.3e-22 109.8 168 39.3
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.6e-21 107.5 201 39.3
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 1.0e-20 104.8 175 36.6
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 1.4e-20 104.4 146 46.6
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 1.8e-20 104.0 173 37.0
A05p06650 Brassica napus HOM05D010480 ORTHO05D003856 1.8e-20 104.0 235 34.0
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 1.8e-20 104.0 173 37.0
BraA05t19631Z Brassica rapa HOM05D010480 ORTHO05D003856 1.8e-20 104.0 227 33.9
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 3.0e-20 103.2 163 37.4
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 3.0e-20 103.2 146 39.0
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.0e-20 102.8 202 39.1
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 5.2e-20 102.4 154 35.7
Aa31LG7G1510 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-19 101.3 130 46.2
Aa31LG8G17190 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.2e-19 101.3 130 44.6
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 1.2e-19 101.3 163 37.4
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 1.2e-19 101.3 163 37.4
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 1.2e-19 101.3 270 32.2
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.5e-19 100.9 223 33.6
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.4e-19 99.4 114 45.6
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 7.5e-19 98.6 218 34.9
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 1.7e-18 97.4 141 38.3
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.2e-18 97.1 190 37.9
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 4.9e-18 95.9 222 32.4
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 6.4e-18 95.5 201 34.3
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 6.4e-18 95.5 135 38.5
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 6.4e-18 95.5 135 38.5
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 6.4e-18 95.5 135 38.5
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 8.3e-18 95.1 169 35.5
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 8.3e-18 95.1 141 37.6
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 1.4e-17 94.4 169 35.5
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 1.4e-17 94.4 169 35.5
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 2.4e-17 93.6 172 33.1
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 2.4e-17 93.6 124 41.9
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 2.4e-17 93.6 197 31.5
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.1e-17 92.8 173 38.7
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 5.4e-17 92.4 176 39.8
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 5.4e-17 92.4 146 38.4
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 5.4e-17 92.4 162 36.4
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.2e-17 91.7 114 43.0
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 9.2e-17 91.7 181 33.7
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 9.2e-17 91.7 181 34.3
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 1.6e-16 90.9 181 33.7
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 1.6e-16 90.9 127 41.7
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.0e-16 90.5 147 36.1
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 2.7e-16 90.1 116 39.7
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 1.0e-15 88.2 112 39.3
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.3e-15 87.0 207 33.8
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 2.3e-15 87.0 146 35.6
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 2.3e-15 87.0 154 35.1
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 3.0e-15 86.7 132 38.6
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 3.9e-15 86.3 110 37.3
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 5.0e-15 85.9 117 41.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 5.0e-15 85.9 125 38.4
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.9e-14 84.0 137 38.0
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 2.5e-14 83.6 257 30.0
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 2.5e-14 83.6 190 31.1
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 2.5e-14 83.6 158 32.9
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 2.5e-14 83.6 111 36.0
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 3.3e-14 83.2 147 35.4
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.3e-14 83.2 190 31.1
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 4.3e-14 82.8 127 39.4
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 5.6e-14 82.4 200 31.5
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.6e-14 82.4 160 33.8
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 7.3e-14 82.0 128 39.1
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 7.3e-14 82.0 168 35.1
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 7.3e-14 82.0 124 39.5
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 7.3e-14 82.0 207 29.0
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 9.5e-14 81.6 180 31.7
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 9.5e-14 81.6 192 33.9
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 9.5e-14 81.6 136 34.6
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.2e-13 81.3 137 38.0
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 1.2e-13 81.3 236 29.7
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 1.2e-13 81.3 115 34.8
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.6e-13 80.9 182 33.5
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 1.6e-13 80.9 248 29.0
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 2.1e-13 80.5 144 34.0
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 2.8e-13 80.1 136 36.0
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.7e-13 79.3 131 35.9
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 4.7e-13 79.3 125 36.8
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 6.2e-13 79.0 125 36.8
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 6.2e-13 79.0 148 31.8
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 8.0e-13 78.6 193 30.1
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 8.0e-13 78.6 144 36.1
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 8.0e-13 78.6 118 37.3
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.8e-12 77.4 139 35.3
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 1.8e-12 77.4 155 30.3
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 2.3e-12 77.0 124 39.5
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 4.0e-12 76.3 131 35.9
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 6.8e-12 75.5 129 34.1
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.5e-11 74.3 171 33.3
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 2.0e-11 73.9 210 29.5
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 2.6e-11 73.6 121 36.4
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 4.4e-11 72.8 242 28.9
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 4.4e-11 72.8 193 28.0
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 5.8e-11 72.4 153 32.7
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 5.8e-11 72.4 111 36.9
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 7.5e-11 72.0 196 28.1
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 9.8e-11 71.6 129 34.9
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 9.8e-11 71.6 203 29.6
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.3e-10 71.2 121 33.1
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.3e-10 71.2 130 35.4
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.7e-10 70.9 203 29.6
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 2.9e-10 70.1 237 28.7
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 4.9e-10 69.3 193 26.9
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 6.4e-10 68.9 142 31.7
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 1.1e-09 68.2 111 38.7
Aa31LG6G9550 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.4e-09 65.9 75 48.0
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 5.4e-09 65.9 121 38.8
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 7.0e-09 65.5 114 34.2
Aa31LG6G10180 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.2e-09 65.1 174 35.1
BcaB02g09091 Brassica carinata HOM05D010480 ORTHO05D003856 9.2e-09 65.1 60 46.7
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 1.6e-08 64.3 121 35.5
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 2.1e-08 63.9 121 33.1
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.7e-08 63.5 123 36.6
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 7.8e-08 62.0 104 34.6
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 7.8e-08 62.0 241 27.4
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 1.0e-07 61.6 242 26.9
Aa31LG7G1580 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.3e-07 61.2 110 39.1
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 1.3e-07 61.2 150 30.0
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.3e-07 61.2 123 32.5
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 8.6e-07 58.5 163 35.0
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 1.5e-06 57.8 222 24.3
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 4.3e-06 56.2 122 31.1


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