Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p26440 Brassica napus HOM05D003272 ORTHO05D003776 3.5e-73 278.1 132 100.0
C01p16970 Brassica napus HOM05D003272 ORTHO05D003776 3.4e-52 208.4 139 74.8
BraA05t19259Z Brassica rapa HOM05D003272 ORTHO05D003776 1.4e-42 176.4 130 71.5
A05p02660 Brassica napus HOM05D003272 ORTHO05D003776 1.3e-40 169.9 130 69.2
BcaC02g12450 Brassica carinata HOM05D003272 ORTHO05D003776 5.7e-39 164.5 123 67.5
C04p03170 Brassica napus HOM05D003272 ORTHO05D003776 5.7e-39 164.5 123 67.5
A05p02670 Brassica napus HOM05D003272 ORTHO05D003776 9.7e-39 163.7 135 64.4
C04p03190 Brassica napus HOM05D003272 ORTHO05D003776 1.3e-38 163.3 136 66.2
BolC4t21957H Brassica oleracea HOM05D003272 ORTHO05D003776 1.3e-38 163.3 136 66.2
BcaC02g12451 Brassica carinata HOM05D003272 ORTHO05D003776 2.8e-38 162.2 136 65.4
Sp4g24230 Schrenkiella parvula HOM05D003272 ORTHO05D003776 7.6e-36 154.1 137 60.6
AL4G40320 Arabidopsis lyrata HOM05D003272 ORTHO05D003776 8.5e-35 150.6 137 58.4
AT2G41960 Arabidopsis thaliana HOM05D003272 ORTHO05D003776 2.5e-34 149.1 137 56.9
Carub.0004s2429 Capsella rubella HOM05D003272 ORTHO05D003776 2.1e-33 146.0 132 60.6
CARHR137060 Cardamine hirsuta HOM05D003272 ORTHO05D003776 7.9e-33 144.1 137 57.7
Thhalv10016161m.g Eutrema salsugineum HOM05D003272 ORTHO05D003776 3.9e-32 141.7 140 57.1
Thhalv10016156m.g Eutrema salsugineum HOM05D003272 ORTHO05D003776 2.5e-31 139.0 140 56.4
Aa31LG1G24170 Aethionema arabicum HOM05D003272 ORTHO05D003776 3.8e-27 125.2 135 52.6
C06p01710 Brassica napus HOM05D003272 ORTHO05D003776 1.9e-26 122.9 66 86.4
THA.LOC104802668 Tarenaya hassleriana HOM05D003272 ORTHO05D003776 6.3e-22 107.8 128 49.2
BolC3t15029H Brassica oleracea HOM05D003272 ORTHO05D003776 5.3e-21 104.8 51 94.1
BcaB01g03429 Brassica carinata HOM05D003272 ORTHO05D003776 6.9e-21 104.4 124 51.6
BcaB01g03430 Brassica carinata HOM05D003272 ORTHO05D003776 6.9e-21 104.4 124 51.6
Aa31LG10G12750 Aethionema arabicum HOM05D003272 ORTHO05D003776 2.5e-18 95.9 119 50.4
Sp5g04670 Schrenkiella parvula HOM05D003272 ORTHO05D003776 5.2e-16 88.2 114 45.6
AT3G58050 Arabidopsis thaliana HOM05D003272 ORTHO05D003776 1.1e-15 87.0 114 43.9
CARHR168370 Cardamine hirsuta HOM05D003272 ORTHO05D003776 5.7e-15 84.7 121 43.8
AL5G39720 Arabidopsis lyrata HOM05D003272 ORTHO05D003776 1.7e-14 83.2 114 42.1
Atru.chr8.1154 Acer truncatum HOM05D003272 ORTHO05D003776 5.3e-13 78.2 124 40.3
QL07p024475 Quercus lobata HOM05D003272 ORTHO05D003776 9.1e-13 77.4 115 39.1
Gohir.D01G124900 Gossypium hirsutum HOM05D003272 ORTHO05D003776 1.6e-12 76.6 110 39.1
Gorai.002G155500 Gossypium raimondii HOM05D003272 ORTHO05D003776 1.6e-12 76.6 110 39.1
CSS0044868 Camellia sinensis var. sinensis HOM05D003272 ORTHO05D003776 2.6e-12 75.9 129 36.4
Manes.09G037500 Manihot esculenta HOM05D003272 ORTHO05D003776 3.5e-12 75.5 121 37.2
Gohir.A01G137100 Gossypium hirsutum HOM05D003272 ORTHO05D003776 4.5e-12 75.1 95 41.1
Thecc.05G174800 Theobroma cacao HOM05D003272 ORTHO05D003776 4.5e-12 75.1 110 37.3
CANSAT64G1991 Cannabis sativa HOM05D003272 ORTHO05D003776 1.0e-11 73.9 136 33.1
Actinidia17288 Actinidia chinensis HOM05D003272 ORTHO05D003776 1.7e-11 73.2 113 38.1
Rhsim04G0095400 Rhododendron simsii HOM05D003272 ORTHO05D003776 1.7e-11 73.2 131 33.6
Actinidia38598 Actinidia chinensis HOM05D003272 ORTHO05D003776 2.2e-11 72.8 129 36.4
Potri.016G060200 Populus trichocarpa HOM05D003272 ORTHO05D003776 2.2e-11 72.8 135 37.0
FAN02G4424 Fragaria x ananassa HOM05D003272 ORTHO05D003776 2.9e-11 72.4 124 35.5
Cfa020144 Carpinus fangiana HOM05D003272 ORTHO05D003776 6.5e-11 71.2 122 37.7
COL.COLO4_29357 Corchorus olitorius HOM05D003272 ORTHO05D003776 6.5e-11 71.2 112 35.7
Haze_20019 Corylus avellana HOM05D003272 ORTHO05D003776 6.5e-11 71.2 136 35.3
FAN09G3998 Fragaria x ananassa HOM05D003272 ORTHO05D003776 1.5e-10 70.1 132 34.8
Sabra16G0063100 Salix brachista HOM05D003272 ORTHO05D003776 1.5e-10 70.1 134 35.1
Ca_12034_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 3.2e-10 68.9 128 37.5
Ca_12036_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 3.2e-10 68.9 128 37.5
FvH4_6g21890 Fragaria vesca HOM05D003272 ORTHO05D003776 3.2e-10 68.9 128 34.4
FAN14G3195 Fragaria x ananassa HOM05D003272 ORTHO05D003776 3.2e-10 68.9 128 34.4
Gorai.006G143700 Gossypium raimondii HOM05D003272 ORTHO05D003776 4.2e-10 68.6 125 40.0
CiPaw.10G025200 Carya illinoinensis HOM05D003272 ORTHO05D003776 5.5e-10 68.2 114 38.6
Dinv16344 Davidia involucrata HOM05D003272 ORTHO05D003776 7.2e-10 67.8 110 38.2
Hund24815 Selenicereus undatus HOM05D003272 ORTHO05D003776 7.2e-10 67.8 136 30.9
THA.LOC104824482 Tarenaya hassleriana HOM05D003272 ORTHO05D003776 7.2e-10 67.8 102 42.2
MD14G1054100 Malus domestica HOM05D003272 ORTHO05D003776 9.4e-10 67.4 128 34.4
FAN05G4520 Fragaria x ananassa HOM05D003272 ORTHO05D003776 1.2e-09 67.0 121 36.4
Gohir.D09G124800 Gossypium hirsutum HOM05D003272 ORTHO05D003776 1.2e-09 67.0 124 38.7
Sabra06G0149200 Salix brachista HOM05D003272 ORTHO05D003776 2.1e-09 66.2 132 34.1
Duzib093G2065 Durio zibethinus HOM05D003272 ORTHO05D003776 2.7e-09 65.9 108 34.3
Potri.006G194500 Populus trichocarpa HOM05D003272 ORTHO05D003776 2.7e-09 65.9 107 36.4
Ciclev10010926m.g Citrus clementina HOM05D003272 ORTHO05D003776 4.7e-09 65.1 112 36.6
Dinv24041 Davidia involucrata HOM05D003272 ORTHO05D003776 4.7e-09 65.1 95 38.9
Phvul.007G261300 Phaseolus vulgaris HOM05D003272 ORTHO05D003776 6.1e-09 64.7 112 36.6
AUR62012007 Chenopodium quinoa HOM05D003272 ORTHO05D003776 1.0e-08 63.9 118 33.1
Cpa.g.sc85.47 Carica papaya HOM05D003272 ORTHO05D003776 1.4e-08 63.5 117 32.5
Lj2C363G5 Lonicera japonica HOM05D003272 ORTHO05D003776 3.0e-08 62.4 113 36.3
Manes.08G042700 Manihot esculenta HOM05D003272 ORTHO05D003776 3.0e-08 62.4 119 33.6
vmacro22121 Vaccinium macrocarpon HOM05D003272 ORTHO05D003776 4.0e-08 62.0 132 32.6
arahy.Tifrunner.gnm1.ann1.LQ935E Arachis hypogaea HOM05D003272 ORTHO05D003776 5.2e-08 61.6 116 37.1
arahy.Tifrunner.gnm1.ann1.VD9RJB Arachis hypogaea HOM05D003272 ORTHO05D003776 5.2e-08 61.6 116 37.1
RcHm_v2.0_Chr3g0479241 Rosa chinensis HOM05D003272 ORTHO05D003776 5.2e-08 61.6 128 32.0
GSVIVG01033469001 Vitis vinifera HOM05D003272 ORTHO05D003776 5.2e-08 61.6 141 31.9
Actinidia22066 Actinidia chinensis HOM05D003272 ORTHO05D003776 6.7e-08 61.2 112 33.9
Glyma.02G170900 Glycine max HOM05D003272 ORTHO05D003776 6.7e-08 61.2 45 66.7
Glyma.03G146500 Glycine max HOM05D003272 ORTHO05D003776 6.7e-08 61.2 115 38.3
Lj1g0008912 Lotus japonicus HOM05D003272 ORTHO05D003776 6.7e-08 61.2 45 66.7
Lalb_Chr18g0048041 Lupinus albus HOM05D003272 ORTHO05D003776 6.7e-08 61.2 127 36.2
Medtr7g093630 Medicago truncatula HOM05D003272 ORTHO05D003776 8.8e-08 60.8 116 37.1
Psat0s4022g0120 Pisum sativum HOM05D003272 ORTHO05D003776 8.8e-08 60.8 134 34.3
Gohir.D04G097200 Gossypium hirsutum HOM05D003272 ORTHO05D003776 1.2e-07 60.5 127 32.3
AUR62015331 Chenopodium quinoa HOM05D003272 ORTHO05D003776 2.0e-07 59.7 120 30.8
DCAR_013670 Daucus carota HOM05D003272 ORTHO05D003776 2.0e-07 59.7 90 40.0
Gorai.013G213300 Gossypium raimondii HOM05D003272 ORTHO05D003776 2.0e-07 59.7 127 32.3
Medtr1g054355 Medicago truncatula HOM05D003272 ORTHO05D003776 2.0e-07 59.7 128 34.4
VMungo0720G0611 Vigna mungo HOM05D003272 ORTHO05D003776 2.0e-07 59.7 113 34.5
Prupe.7G081000 Prunus persica HOM05D003272 ORTHO05D003776 2.6e-07 59.3 129 34.1
MSTRG.19926 Avicennia marina HOM05D003272 ORTHO05D003776 4.4e-07 58.5 117 33.3
Psat3g067560 Pisum sativum HOM05D003272 ORTHO05D003776 4.4e-07 58.5 50 58.0
TPR.G13362 Trifolium pratense HOM05D003272 ORTHO05D003776 4.4e-07 58.5 115 34.8
Nn7g35964 Nelumbo nucifera HOM05D003272 ORTHO05D003776 5.7e-07 58.2 106 34.0
EL10Ac3g06883 Beta vulgaris HOM05D003272 ORTHO05D003776 7.5e-07 57.8 101 34.7
Phvul.001G144300 Phaseolus vulgaris HOM05D003272 ORTHO05D003776 7.5e-07 57.8 45 62.2
Sed0015373 Sechium edule HOM05D003272 ORTHO05D003776 7.5e-07 57.8 115 35.7
Duzib106G0166 Durio zibethinus HOM05D003272 ORTHO05D003776 1.3e-06 57.0 111 31.5
Ca_08539_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 2.2e-06 56.2 45 60.0
Glyma.19G149800 Glycine max HOM05D003272 ORTHO05D003776 2.8e-06 55.8 45 62.2
Lalb_Chr04g0259561 Lupinus albus HOM05D003272 ORTHO05D003776 2.8e-06 55.8 129 35.7
vmacro22626 Vaccinium macrocarpon HOM05D003272 ORTHO05D003776 2.8e-06 55.8 115 32.2
TWI53G1277 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 3.7e-06 55.5 102 32.4
MELO3C009057.2 Cucumis melo HOM05D003272 ORTHO05D003776 4.8e-06 55.1 85 37.6
DCAR_017040 Daucus carota HOM05D003272 ORTHO05D003776 4.8e-06 55.1 108 32.4
Glyma.09G109000 Glycine max HOM05D003272 ORTHO05D003776 8.2e-06 54.3 113 35.4
Peaxi162Scf00463g00423 Petunia axillaris HOM05D003272 ORTHO05D003776 8.2e-06 54.3 105 35.2


User provided reference genes

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