Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 5.4e-130 467.6 228 100.0
BolC3t14876H Brassica oleracea HOM05D008384 ORTHO05D009842 1.4e-64 250.4 132 97.0
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-43 181.0 97 84.5
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-42 177.6 130 61.5
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 1.5e-39 167.2 142 57.7
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 3.4e-39 166.0 205 39.5
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 7.5e-39 164.9 226 40.7
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 7.5e-39 164.9 181 44.8
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 8.3e-38 161.4 217 39.6
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 5.0e-35 152.1 180 42.2
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-34 151.0 230 39.6
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 1.9e-34 150.2 141 48.2
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 1.9e-34 150.2 196 44.4
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 6.1e-33 145.2 167 44.3
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-32 144.1 181 39.8
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 6.3e-30 135.2 134 52.2
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 2.4e-29 133.3 102 55.9
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 4.1e-29 132.5 126 49.2
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 6.6e-27 125.2 115 50.4
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 1.9e-26 123.6 150 38.7
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 6.1e-25 118.6 209 35.4
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 8.0e-25 118.2 101 55.4
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 3.7e-22 109.4 171 37.4
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 1.1e-21 107.8 255 30.6
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 1.4e-21 107.5 125 44.0
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 1.6e-20 104.0 141 41.1
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 1.6e-20 104.0 113 45.1
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 1.6e-20 104.0 231 29.9
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 1.9e-18 97.1 122 38.5
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 1.9e-18 97.1 248 28.6
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 4.0e-16 89.4 84 50.0
BolC9t55045H Brassica oleracea HOM05D008384 ORTHO05D009842 1.3e-14 84.3 228 32.0
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 1.1e-13 81.3 255 27.8
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 7.1e-13 78.6 246 29.3
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 7.1e-13 78.6 120 30.8
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-12 77.8 121 33.9
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 3.5e-12 76.3 121 29.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 4.6e-12 75.9 120 29.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 7.8e-12 75.1 125 32.0
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 7.8e-12 75.1 125 32.0
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 5.1e-11 72.4 136 32.4
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 5.1e-11 72.4 136 32.4
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 8.6e-11 71.6 125 30.4
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 8.6e-11 71.6 121 28.9
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.1e-10 71.2 216 28.2
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 1.5e-10 70.9 188 29.8
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 1.5e-10 70.9 188 29.8
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 1.5e-10 70.9 188 29.8
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.9e-10 70.5 121 30.6
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.5e-10 70.1 216 27.3
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 3.3e-10 69.7 121 27.3
C03p32490 Brassica napus HOM05D008384 ORTHO05D009842 3.3e-10 69.7 57 47.4
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 3.3e-10 69.7 124 31.5
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 7.3e-10 68.6 122 30.3
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 7.3e-10 68.6 121 29.8
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 7.3e-10 68.6 212 26.9
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.6e-09 67.4 136 30.1
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 1.6e-09 67.4 100 33.0
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 2.1e-09 67.0 121 28.9
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 2.1e-09 67.0 121 28.9
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.8e-09 66.6 100 32.0
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 2.8e-09 66.6 120 29.2
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 2.8e-09 66.6 121 27.3
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 2.8e-09 66.6 121 29.8
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 2.8e-09 66.6 121 27.3
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 3.6e-09 66.2 136 28.7
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 3.6e-09 66.2 118 29.7
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 3.6e-09 66.2 136 28.7
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 4.7e-09 65.9 121 25.6
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 4.7e-09 65.9 121 28.9
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 4.7e-09 65.9 121 28.9
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 4.7e-09 65.9 136 30.9
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 4.7e-09 65.9 132 26.5
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 4.7e-09 65.9 121 28.9
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 4.7e-09 65.9 121 28.9
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 8.1e-09 65.1 136 30.1
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 8.1e-09 65.1 216 26.9
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 8.1e-09 65.1 136 30.1
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 1.1e-08 64.7 100 31.0
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-08 64.7 121 28.9
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 1.4e-08 64.3 118 28.8
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 1.4e-08 64.3 120 28.3
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 1.4e-08 64.3 182 24.2
BcaC01g04902 Brassica carinata HOM05D008384 ORTHO05D009842 1.8e-08 63.9 45 51.1
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.3e-08 63.5 202 21.8
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 2.3e-08 63.5 121 26.4
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 3.1e-08 63.2 125 29.6
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-08 62.8 165 25.5
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 4.0e-08 62.8 121 27.3
C05p38720 Brassica napus HOM05D034814 ORTHO05D039365 4.0e-08 62.8 50 52.0
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 4.0e-08 62.8 121 27.3
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 5.2e-08 62.4 120 28.3
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 1.2e-07 61.2 172 24.4
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 1.2e-07 61.2 68 38.2
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 2.6e-07 60.1 125 27.2
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 3.4e-07 59.7 99 28.3
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 4.4e-07 59.3 121 25.6
BcaB04g17620 Brassica carinata HOM05D009521 ORTHO05D013247 5.8e-07 58.9 82 43.9
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 5.8e-07 58.9 121 26.4
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 5.8e-07 58.9 136 27.2
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 5.8e-07 58.9 117 28.2
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 5.8e-07 58.9 121 26.4
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 5.8e-07 58.9 165 26.1
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 5.8e-07 58.9 144 27.1
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 9.9e-07 58.2 115 24.3
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.3e-06 57.8 111 26.1
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.3e-06 57.8 125 28.0
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-06 57.8 144 25.7
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 1.3e-06 57.8 111 26.1
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 1.7e-06 57.4 178 28.1
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 2.2e-06 57.0 201 21.9
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 2.9e-06 56.6 111 25.2
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 2.9e-06 56.6 111 25.2
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 3.7e-06 56.2 64 39.1
BcaC04g18632 Brassica carinata HOM05D036101 ORTHO05D032848 4.9e-06 55.8 39 66.7
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 6.4e-06 55.5 121 24.8
BolC7t44672H Brassica oleracea HOM05D024522 ORTHO05D023612 6.4e-06 55.5 110 27.3
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 8.4e-06 55.1 112 27.7


User provided reference genes

Program Settings