Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p24030 Brassica napus HOM05D000007 ORTHO05D000017 2.4e-90 335.5 171 100.0
Thhalv10020779m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 3.0e-24 115.9 214 37.4
Sp3g05160 Schrenkiella parvula HOM05D000007 ORTHO05D000017 2.5e-23 112.8 217 38.2
C03p42040 Brassica napus HOM05D000007 ORTHO05D000017 3.7e-22 109.0 192 41.1
CARHR080760 Cardamine hirsuta HOM05D000007 ORTHO05D000017 3.7e-22 109.0 215 38.6
AL3G17100 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.1e-21 107.5 213 37.6
A03p34570 Brassica napus HOM05D000007 ORTHO05D000017 1.1e-21 107.5 193 40.4
BraA03t12634Z Brassica rapa HOM05D000007 ORTHO05D000017 1.1e-21 107.5 193 40.4
BcaC01g04329 Brassica carinata HOM05D000007 ORTHO05D000017 1.8e-21 106.7 192 40.6
BolC3t16484H Brassica oleracea HOM05D000007 ORTHO05D000017 1.8e-21 106.7 192 40.6
BcaB03g14658 Brassica carinata HOM05D000007 ORTHO05D000017 2.4e-21 106.3 198 41.9
AT3G06240 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 3.1e-21 105.9 205 38.0
BcaB01g03790 Brassica carinata HOM05D000007 ORTHO05D000017 3.4e-20 102.4 73 69.9
THA.LOC104818813 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 7.9e-17 91.3 187 36.9
THA.LOC104818822 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.3e-16 89.7 202 37.1
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 8.7e-16 87.8 190 37.9
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 3.7e-14 82.4 222 32.9
THA.LOC104818784 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 8.2e-14 81.3 189 35.4
THA.LOC104799786 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.3e-13 78.6 215 30.7
THA.LOC104818816 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.3e-13 78.6 189 34.4
THA.LOC104818785 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 9.0e-13 77.8 188 34.0
THA.LOC104818817 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 9.0e-13 77.8 190 34.2
Carub.0003s0567 Capsella rubella HOM05D000007 ORTHO05D000017 3.4e-12 75.9 73 56.2
BraA03t12633Z Brassica rapa HOM05D000007 ORTHO05D000017 4.5e-12 75.5 52 76.9
Eucgr.H02705 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.9e-11 72.8 110 42.7
THA.LOC104818818 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.9e-11 72.8 188 33.0
THA.LOC104818825 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 6.5e-11 71.6 198 32.3
AL7G42560 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.9e-10 70.1 200 31.0
THA.LOC104818824 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.9e-10 70.1 188 33.0
Nitab4.5_0004771g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.2e-10 68.9 137 38.7
THA.LOC104818815 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 4.2e-10 68.9 198 32.8
ECA246G2645 Erigeron canadensis HOM05D000007 ORTHO05D000017 1.2e-09 67.4 174 30.5
ECA246G4363 Erigeron canadensis HOM05D000007 ORTHO05D000017 2.1e-09 66.6 174 31.0
Lsat_1_v5_gn_3_24620 Lactuca sativa HOM05D000007 ORTHO05D000017 2.7e-09 66.2 149 34.9
Medtr3g036335 Medicago truncatula HOM05D000007 ORTHO05D000017 4.6e-09 65.5 174 28.7
Eucgr.H02939 Eucalyptus grandis HOM05D000007 ORTHO05D000017 6.1e-09 65.1 169 32.5
Cc03_g06540 Coffea canephora HOM05D000007 ORTHO05D000017 7.9e-09 64.7 116 37.1
HanXRQChr17g0538721 Helianthus annuus HOM05D000007 ORTHO05D000017 7.9e-09 64.7 172 30.2
Potri.006G012900 Populus trichocarpa HOM05D000007 ORTHO05D000017 7.9e-09 64.7 146 33.6
Medtr3g010430 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-08 64.3 169 27.8
Prupe.2G120700 Prunus persica HOM05D000007 ORTHO05D000039 1.8e-08 63.5 122 36.1
GSVIVG01026027001 Vitis vinifera HOM05D000007 ORTHO05D000017 3.9e-08 62.4 135 30.4
COL.COLO4_06115 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.1e-08 62.0 172 28.5
Peaxi162Scf01070g00125 Petunia axillaris HOM05D000007 ORTHO05D000017 6.7e-08 61.6 172 29.7
PSO832G1986 Papaver somniferum HOM05D000007 ORTHO05D000017 8.7e-08 61.2 167 29.9
PSO832G3312 Papaver somniferum HOM05D000007 ORTHO05D000017 8.7e-08 61.2 167 29.9
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 8.7e-08 61.2 175 30.3
Dinv38360 Davidia involucrata HOM05D000007 ORTHO05D000017 1.5e-07 60.5 174 30.5
Eucgr.H02696 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.5e-07 60.5 183 30.1
Medtr3g030330 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-07 60.5 165 30.3
Eucgr.H02694 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.9e-07 60.1 149 32.2
Lj3P550T16 Lonicera japonica HOM05D000007 ORTHO05D000017 1.9e-07 60.1 162 30.9
PSO339G5766 Papaver somniferum HOM05D000007 ORTHO05D000017 1.9e-07 60.1 81 45.7
Cfa003137 Carpinus fangiana HOM05D000007 ORTHO05D000017 2.5e-07 59.7 174 29.9
PGSC0003DMG400031233 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-07 59.7 149 33.6
VMungo0540G1914 Vigna mungo HOM05D000007 ORTHO05D000017 2.5e-07 59.7 175 29.7
Ciclev10003513m.g Citrus clementina HOM05D000007 ORTHO05D000017 3.3e-07 59.3 122 32.8
Lj3P553T4 Lonicera japonica HOM05D000007 ORTHO05D000017 3.3e-07 59.3 175 30.9
MD11G1203000 Malus domestica HOM05D000007 ORTHO05D005026 3.3e-07 59.3 200 28.0
Prupe.4G237500 Prunus persica HOM05D000007 ORTHO05D005026 3.3e-07 59.3 184 29.9
SGA_v2.0_scaffold4G01870 Striga asiatica HOM05D000007 ORTHO05D000017 3.3e-07 59.3 168 31.5
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 3.3e-07 59.3 216 28.7
TWI34G0359 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 3.3e-07 59.3 148 29.1
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 4.3e-07 58.9 163 30.7
Lj3P551T15 Lonicera japonica HOM05D000007 ORTHO05D000017 5.7e-07 58.5 175 30.9
PSO675G5380 Papaver somniferum HOM05D000007 ORTHO05D000017 5.7e-07 58.5 122 35.2
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 5.7e-07 58.5 146 28.1
Rhsim10G0008300 Rhododendron simsii HOM05D000007 ORTHO05D000017 5.7e-07 58.5 112 40.2
DCAR_020301 Daucus carota HOM05D000007 ORTHO05D000017 7.4e-07 58.2 168 27.4
Eucgr.H02923 Eucalyptus grandis HOM05D000007 ORTHO05D000017 7.4e-07 58.2 169 30.2
Gohir.D08G025866 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.4e-07 58.2 171 28.1
Gohir.D10G159700 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.4e-07 58.2 187 31.0
Gorai.011G179400 Gossypium raimondii HOM05D000007 ORTHO05D000017 7.4e-07 58.2 187 31.0
Lj6g0021912 Lotus japonicus HOM05D000007 ORTHO05D000017 7.4e-07 58.2 167 28.7
PSO541G1145 Papaver somniferum HOM05D000007 ORTHO05D000017 7.4e-07 58.2 116 32.8
Psat5g160200 Pisum sativum HOM05D000007 ORTHO05D000017 7.4e-07 58.2 160 30.0
FvH4_6g40002 Fragaria vesca HOM05D000007 ORTHO05D000017 9.7e-07 57.8 177 27.7
Medtr3g010590 Medicago truncatula HOM05D000007 ORTHO05D000017 9.7e-07 57.8 166 28.3
Medtr3g058470 Medicago truncatula HOM05D000007 ORTHO05D000017 9.7e-07 57.8 164 27.4
Oeu016715.1 Olea europaea HOM05D000007 ORTHO05D000017 9.7e-07 57.8 156 28.8
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-07 57.8 170 27.1
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 1.3e-06 57.4 176 29.0
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.3e-06 57.4 99 38.4
Haze_25865 Corylus avellana HOM05D000007 ORTHO05D000017 1.3e-06 57.4 174 29.9
Migut.D01866 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.3e-06 57.4 142 28.9
Eucgr.H02715 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.3e-06 57.4 156 28.8
Eucgr.H02731 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.3e-06 57.4 156 28.8
Medtr4g108820 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-06 57.4 130 31.5
PSO832G3627 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-06 57.4 167 29.9
Peaxi162Scf00421g00021 Petunia axillaris HOM05D000007 ORTHO05D000017 1.3e-06 57.4 182 29.1
vmacro18930 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.3e-06 57.4 196 27.6
CAN.G1375.9 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-06 57.0 127 29.1
FvH4_7g32350 Fragaria vesca HOM05D000007 ORTHO05D013322 1.6e-06 57.0 46 60.9
FAN01G0498 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.6e-06 57.0 124 33.1
Gohir.A10G108116 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.6e-06 57.0 165 33.3
Gohir.D08G025833 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.6e-06 57.0 185 27.6
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 1.6e-06 57.0 177 29.4
Medtr3g010520 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-06 57.0 159 29.6
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 1.6e-06 57.0 174 27.6
RcHm_v2.0_Chr7g0203691 Rosa chinensis HOM05D000007 ORTHO05D000017 1.6e-06 57.0 143 31.5
arahy.Tifrunner.gnm1.ann1.4I2C1H Arachis hypogaea HOM05D000007 ORTHO05D000017 2.2e-06 56.6 88 37.5
arahy.Tifrunner.gnm1.ann1.XM65SU Arachis hypogaea HOM05D000007 ORTHO05D000017 2.2e-06 56.6 88 37.5
Cc04_g11930 Coffea canephora HOM05D000007 ORTHO05D000017 2.2e-06 56.6 163 32.5
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 2.2e-06 56.6 183 27.3
PSO729G0084 Papaver somniferum HOM05D000007 ORTHO05D000017 2.2e-06 56.6 132 34.8
Cc03_g07520 Coffea canephora HOM05D000007 ORTHO05D000017 2.8e-06 56.2 156 25.6
DCAR_004118 Daucus carota HOM05D000007 ORTHO05D013591 2.8e-06 56.2 155 35.5
Migut.M01404 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.8e-06 56.2 169 30.8
Eucgr.H02936 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.8e-06 56.2 132 30.3
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.8e-06 56.2 168 29.8
Cfa015552 Carpinus fangiana HOM05D000007 ORTHO05D000017 3.7e-06 55.8 177 31.1
DCAR_017067 Daucus carota HOM05D000007 ORTHO05D000017 3.7e-06 55.8 172 29.7
DCAR_031132 Daucus carota HOM05D000007 ORTHO05D000039 3.7e-06 55.8 146 28.8
Migut.C00028 Erythranthe guttata HOM05D000007 ORTHO05D000017 3.7e-06 55.8 149 32.2
Gorai.004G021900 Gossypium raimondii HOM05D000007 ORTHO05D000017 3.7e-06 55.8 171 28.1
Lj3P552T16 Lonicera japonica HOM05D000007 ORTHO05D000017 3.7e-06 55.8 154 30.5
Medtr5g096630 Medicago truncatula HOM05D000007 ORTHO05D000039 3.7e-06 55.8 50 48.0
Medtr7g016930 Medicago truncatula HOM05D000007 ORTHO05D000039 3.7e-06 55.8 55 43.6
Solyc10g075010.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.7e-06 55.8 142 35.9
TWI34G1150 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 3.7e-06 55.8 169 29.6
CSS0050410 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 4.8e-06 55.5 99 37.4
CiPaw.07G037800 Carya illinoinensis HOM05D000007 ORTHO05D000017 4.8e-06 55.5 55 50.9
AUR62032803 Chenopodium quinoa HOM05D000007 ORTHO05D000017 4.8e-06 55.5 177 28.8
Dinv05295 Davidia involucrata HOM05D000007 ORTHO05D000039 4.8e-06 55.5 156 27.6
Dinv11914 Davidia involucrata HOM05D000007 ORTHO05D000017 4.8e-06 55.5 168 28.0
FAN03G2734 Fragaria x ananassa HOM05D000007 ORTHO05D013322 4.8e-06 55.5 45 60.0
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 4.8e-06 55.5 176 28.4
Lalb_Chr20g0118311 Lupinus albus HOM05D000007 ORTHO05D000017 4.8e-06 55.5 162 28.4
Medtr3g006570 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-06 55.5 170 25.3
Medtr3g007330 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-06 55.5 191 27.7
Medtr3g013770 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-06 55.5 160 28.1
PSO063G5598 Papaver somniferum HOM05D000007 ORTHO05D000017 4.8e-06 55.5 152 30.3
QL08p017442 Quercus lobata HOM05D000007 ORTHO05D000017 4.8e-06 55.5 172 29.1
SalBow1G2862 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.8e-06 55.5 145 30.3
SalBow1G3094 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.8e-06 55.5 131 35.9
Thecc.04G197500 Theobroma cacao HOM05D000007 ORTHO05D000017 4.8e-06 55.5 166 30.7
Thecc.04G197700 Theobroma cacao HOM05D000007 ORTHO05D000017 4.8e-06 55.5 166 30.7
vmacro00490 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.8e-06 55.5 154 31.2
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 6.3e-06 55.1 109 34.9
Haze_00995 Corylus avellana HOM05D000007 ORTHO05D000017 6.3e-06 55.1 177 29.9
Haze_06947 Corylus avellana HOM05D000007 ORTHO05D000017 6.3e-06 55.1 191 27.7
DCAR_030528 Daucus carota HOM05D002200 ORTHO05D002294 6.3e-06 55.1 151 27.8
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 6.3e-06 55.1 174 27.6
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 6.3e-06 55.1 154 29.2
Dinv43784 Davidia involucrata HOM05D001290 ORTHO05D001180 6.3e-06 55.1 147 29.3
Eucgr.H02929 Eucalyptus grandis HOM05D000007 ORTHO05D000017 6.3e-06 55.1 170 31.8
FAN03G3334 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.3e-06 55.1 143 34.3
FAN11G2499 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.3e-06 55.1 177 30.5
Medtr3g006500 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-06 55.1 176 27.3
Medtr4g116340 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-06 55.1 141 31.2
PSO832G4473 Papaver somniferum HOM05D000007 ORTHO05D000017 6.3e-06 55.1 151 29.8
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 6.3e-06 55.1 180 28.3
Potri.001G035500 Populus trichocarpa HOM05D000007 ORTHO05D000017 6.3e-06 55.1 176 27.8
SalBow1G0243 Salvia bowleyana HOM05D000007 ORTHO05D000017 6.3e-06 55.1 104 40.4
SalBow1G4489 Salvia bowleyana HOM05D000007 ORTHO05D000017 6.3e-06 55.1 104 40.4
PGSC0003DMG400003831 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.3e-06 55.1 173 30.1
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 6.3e-06 55.1 171 27.5
arahy.Tifrunner.gnm1.ann1.AP71S7 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.2e-06 54.7 160 28.1
arahy.Tifrunner.gnm1.ann1.SE5UPX Arachis hypogaea HOM05D000007 ORTHO05D000017 8.2e-06 54.7 160 28.1
CiPaw.07G037500 Carya illinoinensis HOM05D000007 ORTHO05D000017 8.2e-06 54.7 147 29.9
Cc03_g07530 Coffea canephora HOM05D000007 ORTHO05D000017 8.2e-06 54.7 177 26.6
Haze_14522 Corylus avellana HOM05D000007 ORTHO05D000039 8.2e-06 54.7 94 35.1
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 8.2e-06 54.7 153 28.1
FvH4_7g25410 Fragaria vesca HOM05D000007 ORTHO05D000017 8.2e-06 54.7 167 29.9
FAN01G3104 Fragaria x ananassa HOM05D000007 ORTHO05D000399 8.2e-06 54.7 170 27.6
FAN06G2196 Fragaria x ananassa HOM05D000007 ORTHO05D000399 8.2e-06 54.7 167 29.9
Lsat_1_v5_gn_6_61400 Lactuca sativa HOM05D000007 ORTHO05D000017 8.2e-06 54.7 152 30.9
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 8.2e-06 54.7 142 32.4
Peaxi162Scf00009g02529 Petunia axillaris HOM05D000007 ORTHO05D000017 8.2e-06 54.7 107 38.3
Peaxi162Scf00047g00929 Petunia axillaris HOM05D000007 ORTHO05D014560 8.2e-06 54.7 97 34.0
RcHm_v2.0_Chr2g0154571 Rosa chinensis HOM05D000007 ORTHO05D000017 8.2e-06 54.7 184 26.1


User provided reference genes

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