Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p23300 Brassica napus HOM05D001557 ORTHO05D001299 8.1e-100 367.1 186 100.0
BcaC02g07640 Brassica carinata HOM05D001557 ORTHO05D001299 4.4e-45 185.3 204 57.8
BolC4t27985H Brassica oleracea HOM05D001557 ORTHO05D001299 4.4e-45 185.3 204 57.8
A04p27570 Brassica napus HOM05D001557 ORTHO05D001299 7.4e-45 184.5 204 57.8
C04p65070 Brassica napus HOM05D001557 ORTHO05D001299 7.4e-45 184.5 204 57.8
BraA04t18252Z Brassica rapa HOM05D001557 ORTHO05D001299 7.4e-45 184.5 204 57.8
Sp4g18260 Schrenkiella parvula HOM05D001557 ORTHO05D001299 6.3e-44 181.4 202 56.4
Thhalv10016909m.g Eutrema salsugineum HOM05D001557 ORTHO05D001299 7.0e-43 177.9 202 55.0
AL4G32100 Arabidopsis lyrata HOM05D001557 ORTHO05D001299 9.1e-43 177.6 206 57.3
AL970U10010 Arabidopsis lyrata HOM05D001557 ORTHO05D001299 9.1e-43 177.6 206 57.3
AT2G36000 Arabidopsis thaliana HOM05D001557 ORTHO05D001299 2.0e-42 176.4 206 56.8
Carub.0004s1775 Capsella rubella HOM05D001557 ORTHO05D001299 1.0e-41 174.1 206 56.8
CARHR130260 Cardamine hirsuta HOM05D001557 ORTHO05D001299 8.5e-41 171.0 201 55.7
BcaB06g28905 Brassica carinata HOM05D001557 ORTHO05D001299 3.6e-39 165.6 205 53.7
Aa31LG5G21140 Aethionema arabicum HOM05D001557 ORTHO05D001299 4.0e-38 162.2 202 52.0
THA.LOC104823635 Tarenaya hassleriana HOM05D001557 ORTHO05D001299 9.1e-27 124.4 180 45.0
Cpa.g.sc104.58 Carica papaya HOM05D001557 ORTHO05D001299 9.2e-19 97.8 188 38.8
Haze_19684 Corylus avellana HOM05D001557 ORTHO05D001299 3.5e-18 95.9 141 41.8
Ciclev10012147m.g Citrus clementina HOM05D001557 ORTHO05D001299 7.3e-16 88.2 145 40.0
CiPaw.09G019200 Carya illinoinensis HOM05D001557 ORTHO05D001299 9.5e-16 87.8 116 44.8
CiPaw.10G015600 Carya illinoinensis HOM05D001557 ORTHO05D001299 1.2e-15 87.4 116 44.8
CsaV3_6G041010 Cucumis sativus L. HOM05D001557 ORTHO05D001299 2.8e-15 86.3 116 44.8
MELO3C024579.2 Cucumis melo HOM05D001557 ORTHO05D001299 3.6e-15 85.9 145 40.0
Thecc.05G101300 Theobroma cacao HOM05D001557 ORTHO05D001299 3.6e-15 85.9 132 40.9
ClCG01G014920 Citrullus lanatus HOM05D001557 ORTHO05D001299 6.1e-15 85.1 116 44.0
Hma1.2p1_1442F.1_g283770 Hydrangea macrophylla HOM05D001557 ORTHO05D001299 8.0e-15 84.7 116 41.4
Atru.chr8.1393 Acer truncatum HOM05D001557 ORTHO05D001299 1.0e-14 84.3 116 44.0
Sed0016619 Sechium edule HOM05D001557 ORTHO05D001299 1.8e-14 83.6 151 37.7
CANSAT11G0738 Cannabis sativa HOM05D001557 ORTHO05D001299 2.3e-14 83.2 136 40.4
Lalb_Chr25g0284751 Lupinus albus HOM05D001557 ORTHO05D001299 2.3e-14 83.2 116 45.7
Dinv12324 Davidia involucrata HOM05D001557 ORTHO05D001299 4.0e-14 82.4 141 36.9
FAN05G3032 Fragaria x ananassa HOM05D001557 ORTHO05D001299 5.2e-14 82.0 148 38.5
Lj1P1048T24 Lonicera japonica HOM05D001557 ORTHO05D001299 5.2e-14 82.0 115 42.6
unitig_22.g5995 Utricularia gibba HOM05D001557 ORTHO05D001299 5.2e-14 82.0 136 41.2
MSTRG.10408 Avicennia marina HOM05D001557 ORTHO05D001299 6.8e-14 81.6 134 41.8
BcaB06g28906 Brassica carinata HOM05D001557 ORTHO05D001299 1.5e-13 80.5 66 66.7
Duzib093G1903 Durio zibethinus HOM05D001557 ORTHO05D001299 2.0e-13 80.1 116 41.4
Gohir.A13G131900 Gossypium hirsutum HOM05D001557 ORTHO05D001299 2.6e-13 79.7 160 35.6
Gohir.D13G135300 Gossypium hirsutum HOM05D001557 ORTHO05D001299 3.4e-13 79.3 147 36.7
Gorai.013G151800 Gossypium raimondii HOM05D001557 ORTHO05D001299 3.4e-13 79.3 147 36.7
Aqoxy2G02376 Aquilegia oxysepala HOM05D001557 ORTHO05D001299 5.8e-13 78.6 139 41.0
FvH4_6g19990 Fragaria vesca HOM05D001557 ORTHO05D001299 5.8e-13 78.6 127 38.6
FAN14G5498 Fragaria x ananassa HOM05D001557 ORTHO05D001299 7.5e-13 78.2 148 37.2
Oeu039621.1 Olea europaea HOM05D001557 ORTHO05D001299 2.2e-12 76.6 142 40.1
PGR142G1023 Punica granatum HOM05D001557 ORTHO05D001299 2.2e-12 76.6 130 41.5
arahy.Tifrunner.gnm1.ann1.GYFX5G Arachis hypogaea HOM05D001557 ORTHO05D001299 2.9e-12 76.3 116 37.9
Ca_03604_v3 Cicer arietinum L. HOM05D001557 ORTHO05D001299 6.4e-12 75.1 136 36.8
Glyma.08G167900 Glycine max HOM05D001557 ORTHO05D001299 6.4e-12 75.1 116 39.7
Nn6g34751 Nelumbo nucifera HOM05D001557 ORTHO05D001299 6.4e-12 75.1 135 37.8
Phvul.005G059600 Phaseolus vulgaris HOM05D001557 ORTHO05D001299 8.3e-12 74.7 136 37.5
Medtr2g067230 Medicago truncatula HOM05D001557 ORTHO05D001299 1.9e-11 73.6 138 39.1
arahy.Tifrunner.gnm1.ann1.DE57MX Arachis hypogaea HOM05D004241 ORTHO05D001299 2.4e-11 73.2 135 34.8
Lj3g0005048 Lotus japonicus HOM05D001557 ORTHO05D001299 3.2e-11 72.8 116 39.7
arahy.Tifrunner.gnm1.ann1.12W07B Arachis hypogaea HOM05D004241 ORTHO05D001299 4.1e-11 72.4 135 34.8
TAR369G0564 Trochodendron aralioides HOM05D001557 ORTHO05D001299 9.2e-11 71.2 133 35.3
VMungo1080G0783 Vigna mungo HOM05D001557 ORTHO05D001299 9.2e-11 71.2 146 34.9
MBI17_g29498_MAGBIO Magnolia biondii HOM05D001557 ORTHO05D001299 2.7e-10 69.7 116 38.8
CDE09G0047 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 3.5e-10 69.3 132 36.4
TPR.G33842 Trifolium pratense HOM05D001557 ORTHO05D001299 4.6e-10 68.9 113 38.1
HPP92_001099 Vanilla planifolia HOM05D001557 ORTHO05D001299 4.6e-10 68.9 140 35.0
CDE02G3812 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 1.3e-09 67.4 163 34.4
PGSC0003DMG400035474 Solanum tuberosum HOM05D001557 ORTHO05D001299 1.7e-09 67.0 117 38.5
Solyc01g007750.3 Solanum lycopersicum HOM05D001557 ORTHO05D001299 2.3e-09 66.6 138 35.5
ECA233G5174 Erigeron canadensis HOM05D001557 ORTHO05D001299 3.0e-09 66.2 196 36.7
Sopen01g003290 Solanum pennellii HOM05D001557 ORTHO05D001299 3.0e-09 66.2 138 35.5
Sc20g0006640 Simmondsia chinensis HOM05D001557 ORTHO05D001299 3.9e-09 65.9 126 36.5
Glyma.15G259600 Glycine max HOM05D001557 ORTHO05D001299 5.0e-09 65.5 116 37.1
HanXRQChr02g0053271 Helianthus annuus HOM05D001557 ORTHO05D001299 7.3e-08 61.6 123 38.2
Psat1g013520 Pisum sativum HOM05D001557 ORTHO05D001299 1.4e-06 57.4 97 38.1
SGA_v2.0_scaffold184G40032 Striga asiatica HOM05D001557 ORTHO05D001299 1.8e-06 57.0 74 43.2


User provided reference genes

Program Settings