Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 2.3e-37 158.7 99 100.0
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 2.3e-37 158.7 99 100.0
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 8.8e-37 156.8 98 99.0
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 2.8e-30 135.2 99 87.9
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 2.3e-29 132.1 99 86.9
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 5.4e-26 120.9 105 64.8
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 7.0e-26 120.6 100 67.0
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 2.7e-25 118.6 100 66.0
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 3.5e-25 118.2 101 65.3
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.0e-24 116.7 100 66.0
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 3.3e-23 111.7 104 76.9
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 2.1e-22 109.0 102 58.8
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 2.8e-22 108.6 99 74.7
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 3.6e-22 108.2 100 62.0
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.4e-21 106.3 105 65.7
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.4e-21 106.3 105 65.7
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 3.1e-21 105.1 106 66.0
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 5.2e-21 104.4 104 64.4
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 5.2e-21 104.4 105 64.8
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 6.8e-21 104.0 103 74.8
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 6.8e-21 104.0 103 74.8
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 6.8e-21 104.0 103 74.8
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 1.2e-20 103.2 99 73.7
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 1.5e-20 102.8 101 61.4
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 2.7e-17 92.0 78 75.6
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 2.7e-17 92.0 78 75.6
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 2.7e-17 92.0 78 75.6
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 6.6e-16 87.4 100 48.0
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 7.3e-15 84.0 94 45.7
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 1.2e-14 83.2 99 43.4
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.6e-14 82.8 54 68.5
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 2.8e-14 82.0 54 70.4
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 8.1e-14 80.5 100 47.0
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 3.1e-13 78.6 54 66.7
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 3.1e-13 78.6 54 64.8
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 3.1e-13 78.6 98 45.9
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 8.9e-13 77.0 54 63.0
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 8.9e-13 77.0 54 68.5
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 8.9e-13 77.0 100 44.0
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 1.2e-12 76.6 54 64.8
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 2.0e-12 75.9 95 44.2
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 2.6e-12 75.5 55 67.3
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 2.6e-12 75.5 101 44.6
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 3.4e-12 75.1 54 59.3
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 4.4e-12 74.7 54 63.0
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 7.5e-12 73.9 54 64.8
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 9.9e-12 73.6 54 63.0
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 9.9e-12 73.6 54 61.1
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.3e-11 73.2 100 41.0
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 1.3e-11 73.2 54 63.0
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.7e-11 72.8 100 40.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.7e-11 72.8 100 40.0
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 1.7e-11 72.8 51 60.8
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 2.2e-11 72.4 93 40.9
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 2.9e-11 72.0 54 59.3
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 2.9e-11 72.0 99 40.4
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 2.9e-11 72.0 54 61.1
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 2.9e-11 72.0 54 61.1
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 2.9e-11 72.0 54 61.1
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.9e-11 71.2 54 59.3
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 4.9e-11 71.2 54 63.0
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 4.9e-11 71.2 54 63.0
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 6.4e-11 70.9 95 42.1
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 6.4e-11 70.9 91 39.6
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.1e-10 70.1 52 63.5
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 1.1e-10 70.1 54 61.1
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.4e-10 69.7 54 59.3
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 1.4e-10 69.7 55 60.0
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 1.4e-10 69.7 55 60.0
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 1.9e-10 69.3 53 62.3
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 2.4e-10 68.9 54 55.6
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 2.4e-10 68.9 54 55.6
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 4.1e-10 68.2 99 39.4
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 5.4e-10 67.8 53 58.5
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 5.4e-10 67.8 54 55.6
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 9.2e-10 67.0 54 63.0
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.6e-09 66.2 54 53.7
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.6e-09 66.2 55 56.4
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 2.1e-09 65.9 58 62.1
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 2.1e-09 65.9 54 53.7
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 3.5e-09 65.1 54 57.4
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 4.6e-09 64.7 58 60.3
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 4.6e-09 64.7 100 39.0
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 6.0e-09 64.3 54 57.4
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.0e-08 63.5 54 53.7
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.7e-08 62.8 54 48.1
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.3e-08 62.4 52 53.8
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 3.9e-08 61.6 55 58.2
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 3.9e-08 61.6 55 58.2
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 3.9e-08 61.6 55 58.2
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 5.1e-08 61.2 77 45.5
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 6.6e-08 60.8 44 63.6
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 6.6e-08 60.8 58 56.9
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 1.1e-07 60.1 54 50.0
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 1.1e-07 60.1 54 51.9
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 1.1e-07 60.1 55 58.2
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.5e-07 59.7 53 52.8
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.5e-07 59.7 54 55.6
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 1.9e-07 59.3 41 65.9
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 2.5e-07 58.9 56 57.1
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 2.5e-07 58.9 57 54.4
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 2.5e-07 58.9 57 56.1
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 4.3e-07 58.2 93 36.6
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 5.6e-07 57.8 46 56.5
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 1.6e-06 56.2 56 53.6
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 2.8e-06 55.5 54 55.6
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 2.8e-06 55.5 54 51.9
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 2.8e-06 55.5 54 51.9
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 3.6e-06 55.1 54 53.7
Migut.G00489 Erythranthe guttata HOM05D005475 ORTHO05D006575 4.7e-06 54.7 55 49.1
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 4.7e-06 54.7 54 51.9


User provided reference genes

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