Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p21780 Brassica napus HOM05D006735 ORTHO05D009558 2.6e-90 335.5 187 100.0
C06p13880 Brassica napus HOM05D006735 ORTHO05D009558 3.8e-81 305.1 186 92.5
C03p67160 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-36 156.4 134 76.9
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 5.4e-27 125.2 235 45.1
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 5.0e-25 118.6 77 94.8
BolC3t18997H Brassica oleracea HOM05D006735 ORTHO05D009558 9.5e-24 114.4 77 94.8
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 1.8e-22 110.2 77 92.2
BraA04t17554Z Brassica rapa HOM05D002011 ORTHO05D001948 5.8e-21 105.1 56 94.6
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 7.5e-21 104.8 77 90.9
BcaC02g08361 Brassica carinata HOM05D002011 ORTHO05D001948 1.3e-20 104.0 56 92.9
BcaNung06960 Brassica carinata HOM05D002011 ORTHO05D001948 1.3e-20 104.0 56 92.9
A04p19630 Brassica napus HOM05D002011 ORTHO05D001948 1.3e-20 104.0 56 92.9
C04p55210 Brassica napus HOM05D002011 ORTHO05D001948 1.3e-20 104.0 56 92.9
BolC4t27060H Brassica oleracea HOM05D002011 ORTHO05D001948 8.3e-20 101.3 56 91.1
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 4.6e-18 95.5 77 87.0
BcaB06g28049 Brassica carinata HOM05D002011 ORTHO05D001948 3.9e-17 92.4 56 82.1
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 2.1e-15 86.7 54 85.2
Thhalv10000568m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 1.4e-11 73.9 57 70.2
Sp4g04360 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.2e-10 70.9 59 66.1
Sp7g29830 Schrenkiella parvula HOM05D002011 ORTHO05D001948 3.0e-09 66.2 83 51.8
CARHR239930 Cardamine hirsuta HOM05D002011 ORTHO05D001948 1.5e-08 63.9 68 55.9
BcaNung03130 Brassica carinata HOM05D002011 ORTHO05D001948 2.5e-08 63.2 52 63.5
CARHR116290 Cardamine hirsuta HOM05D002011 ORTHO05D001948 2.5e-08 63.2 49 67.3
A01p06260 Brassica napus HOM05D002011 ORTHO05D001948 4.3e-08 62.4 70 51.4
Prupe.1G486600 Prunus persica HOM05D002011 ORTHO05D001948 4.3e-08 62.4 75 46.7
BcaC09g51992 Brassica carinata HOM05D002011 ORTHO05D001948 3.6e-07 59.3 52 59.6
C01p06900 Brassica napus HOM05D002011 ORTHO05D001948 3.6e-07 59.3 52 59.6
BolC1t00687H Brassica oleracea HOM05D002011 ORTHO05D001948 3.6e-07 59.3 52 59.6
AL7G19860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 4.7e-07 58.9 50 62.0
Thhalv10025671m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 4.7e-07 58.9 50 62.0
Gohir.D07G034500 Gossypium hirsutum HOM05D002011 ORTHO05D001948 6.2e-07 58.5 53 54.7
Sed0017330 Sechium edule HOM05D002011 ORTHO05D001948 6.2e-07 58.5 61 49.2
Carub.0007s0852 Capsella rubella HOM05D002011 ORTHO05D001948 8.1e-07 58.2 71 46.5
BraA01t00593Z Brassica rapa HOM05D002011 ORTHO05D001948 1.1e-06 57.8 52 57.7
Actinidia23086 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.4e-06 57.4 49 61.2
A03p61210 Brassica napus HOM05D002011 ORTHO05D001948 1.4e-06 57.4 50 60.0
C07p59060 Brassica napus HOM05D002011 ORTHO05D001948 1.4e-06 57.4 47 61.7
BolC7t46354H Brassica oleracea HOM05D002011 ORTHO05D001948 1.4e-06 57.4 47 61.7
CsaV3_2G032320 Cucumis sativus L. HOM05D002011 ORTHO05D001948 1.4e-06 57.4 63 46.0
Gohir.A07G030600 Gossypium hirsutum HOM05D002011 ORTHO05D001948 1.4e-06 57.4 53 54.7
Gorai.001G036200 Gossypium raimondii HOM05D002011 ORTHO05D001948 1.4e-06 57.4 53 54.7
A08p18360 Brassica napus HOM05D002011 ORTHO05D001948 2.4e-06 56.6 63 50.8
MELO3C011282.2 Cucumis melo HOM05D002011 ORTHO05D001948 2.4e-06 56.6 63 44.4
Thecc.09G019200 Theobroma cacao HOM05D002011 ORTHO05D001948 2.4e-06 56.6 51 56.9
TWI34G1253 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 3.1e-06 56.2 52 55.8
Atru.chr7.2505 Acer truncatum HOM05D002011 ORTHO05D001948 4.0e-06 55.8 53 56.6
BcaC01g01041 Brassica carinata HOM05D002011 ORTHO05D001948 4.0e-06 55.8 63 49.2
BolC3t21060H Brassica oleracea HOM05D002011 ORTHO05D001948 4.0e-06 55.8 63 49.2
BraA08t33793Z Brassica rapa HOM05D002011 ORTHO05D001948 4.0e-06 55.8 50 56.0
ClCG08G013560 Citrullus lanatus HOM05D002011 ORTHO05D001948 4.0e-06 55.8 66 45.5
Dinv18151 Davidia involucrata HOM05D002011 ORTHO05D001948 4.0e-06 55.8 59 57.6
CSS0039956 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 5.2e-06 55.5 46 58.7
Lsat_1_v5_gn_6_115360 Lactuca sativa HOM05D002011 ORTHO05D001948 5.2e-06 55.5 51 54.9
AT4G32030 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 6.8e-06 55.1 50 60.0
BcaB03g12730 Brassica carinata HOM05D002011 ORTHO05D001948 6.8e-06 55.1 50 58.0
CSS0035080 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 8.9e-06 54.7 46 58.7
vmacro11223 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 8.9e-06 54.7 50 56.0


User provided reference genes

Program Settings