Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 7.6e-80 300.4 152 100.0
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 9.0e-73 276.9 155 92.3
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 2.3e-44 182.6 148 70.3
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 8.8e-44 180.6 148 69.6
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 2.0e-43 179.5 148 68.9
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 3.3e-43 178.7 148 67.6
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 2.8e-42 175.6 148 67.6
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 4.8e-42 174.9 148 68.2
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 8.2e-42 174.1 148 68.2
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 2.4e-41 172.6 148 67.6
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 7.2e-38 161.0 148 62.8
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.2e-37 160.2 145 64.1
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.2e-37 160.2 148 62.8
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 9.1e-33 144.1 148 55.4
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 1.2e-32 143.7 148 54.7
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 2.9e-31 139.0 148 52.0
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 8.5e-31 137.5 148 51.4
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 8.5e-31 137.5 148 51.4
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.1e-30 137.1 148 53.4
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 5.5e-30 134.8 148 52.0
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 7.2e-30 134.4 148 52.0
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 7.2e-30 134.4 148 51.4
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 7.2e-30 134.4 148 52.7
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 7.2e-30 134.4 148 52.7
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 7.2e-30 134.4 148 52.7
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 7.2e-30 134.4 148 51.4
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 2.7e-29 132.5 148 52.7
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 3.6e-29 132.1 148 52.0
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 3.6e-29 132.1 150 50.0
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 4.7e-29 131.7 148 50.0
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 4.7e-29 131.7 148 50.7
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 4.7e-29 131.7 150 50.0
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 4.7e-29 131.7 150 50.0
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 6.1e-29 131.3 148 50.7
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 1.0e-28 130.6 148 50.0
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.4e-28 130.2 148 52.7
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 1.8e-28 129.8 145 51.0
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 2.3e-28 129.4 148 49.3
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 3.0e-28 129.0 150 49.3
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 5.2e-28 128.3 148 51.4
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 5.2e-28 128.3 148 50.0
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 5.2e-28 128.3 148 49.3
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 1.5e-27 126.7 148 48.0
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 1.5e-27 126.7 148 50.0
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 2.0e-27 126.3 148 47.3
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 2.6e-27 125.9 148 50.7
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.4e-27 125.2 149 49.0
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.7e-27 124.8 148 49.3
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 7.5e-27 124.4 148 48.6
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 9.8e-27 124.0 148 47.3
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.3e-26 123.6 148 45.9
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 1.3e-26 123.6 148 47.3
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 1.7e-26 123.2 145 48.3
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 6.3e-26 121.3 148 46.6
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.1e-25 120.6 148 48.0
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.1e-25 120.6 148 49.3
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 1.1e-25 120.6 148 48.0
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.4e-25 120.2 120 52.5
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 1.4e-25 120.2 148 50.0
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 1.8e-25 119.8 148 47.3
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 3.1e-25 119.0 148 47.3
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 4.1e-25 118.6 147 46.3
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 9.1e-25 117.5 119 52.9
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 9.1e-25 117.5 168 42.9
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.6e-24 116.7 148 44.6
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 1.6e-24 116.7 144 46.5
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 2.0e-24 116.3 148 45.9
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 2.7e-24 115.9 138 48.6
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 3.5e-24 115.5 149 48.3
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 3.5e-24 115.5 148 45.9
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 4.5e-24 115.2 148 46.6
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 7.7e-24 114.4 149 47.0
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 1.3e-23 113.6 148 43.2
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.3e-23 113.6 149 47.7
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 1.3e-23 113.6 148 44.6
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 1.7e-23 113.2 149 43.6
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 2.9e-23 112.5 137 46.7
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 2.9e-23 112.5 149 46.3
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 3.8e-23 112.1 149 46.3
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 6.5e-23 111.3 149 47.0
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 6.5e-23 111.3 177 40.1
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 1.1e-22 110.5 148 45.9
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 2.5e-22 109.4 120 48.3
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 3.2e-22 109.0 144 48.6
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 4.2e-22 108.6 144 47.9
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 7.2e-22 107.8 149 44.3
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 8.0e-21 104.4 149 45.6
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 2.0e-19 99.8 150 44.0
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 4.4e-19 98.6 144 45.1
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 3.7e-18 95.5 170 39.4
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 8.3e-18 94.4 122 46.7
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 8.3e-18 94.4 148 39.2
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 1.1e-17 94.0 149 43.0
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 1.2e-16 90.5 120 45.0
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 7.8e-16 87.8 148 38.5
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.3e-15 87.0 121 46.3
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 3.0e-12 75.9 147 33.3
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 8.3e-10 67.8 147 32.0
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 8.3e-10 67.8 94 40.4
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 8.3e-10 67.8 51 60.8
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 1.4e-09 67.0 48 66.7
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 1.1e-06 57.4 119 39.5


User provided reference genes

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