Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p20400 Brassica napus HOM05D002063 ORTHO05D042452 7.0e-78 293.9 149 100.0
BolC3t14418H Brassica oleracea HOM05D002063 ORTHO05D042452 7.0e-78 293.9 149 100.0
Sp4g13480 Schrenkiella parvula HOM05D002063 ORTHO05D002075 8.4e-31 137.5 200 46.5
Thhalv10016438m.g Eutrema salsugineum HOM05D002063 ORTHO05D002075 1.4e-30 136.7 179 48.6
A04p23710 Brassica napus HOM05D002063 ORTHO05D002075 3.2e-30 135.6 179 48.0
BraA04t17897Z Brassica rapa HOM05D002063 ORTHO05D002075 3.2e-30 135.6 179 48.0
C04p60150 Brassica napus HOM05D002063 ORTHO05D002075 1.6e-29 133.3 169 50.3
BcaB06g28471 Brassica carinata HOM05D002063 ORTHO05D002075 4.6e-29 131.7 169 49.7
BolC4t27518H Brassica oleracea HOM05D002063 ORTHO05D002075 4.6e-29 131.7 169 49.7
BcaB02g10357 Brassica carinata HOM05D002063 ORTHO05D002075 2.3e-28 129.4 169 49.7
AL4G26030 Arabidopsis lyrata HOM05D002063 ORTHO05D002075 3.9e-28 128.6 182 46.2
AT2G30990 Arabidopsis thaliana HOM05D002063 ORTHO05D002075 6.6e-28 127.9 191 44.5
BcaC02g11186 Brassica carinata HOM05D002063 ORTHO05D002075 1.5e-27 126.7 154 51.9
C04p19490 Brassica napus HOM05D002063 ORTHO05D002075 1.5e-27 126.7 154 51.9
BolC4t23481H Brassica oleracea HOM05D002063 ORTHO05D002075 1.5e-27 126.7 154 51.9
BcaB06g28402 Brassica carinata HOM05D002063 ORTHO05D002075 4.3e-27 125.2 186 43.5
Carub.0004s1221 Capsella rubella HOM05D002063 ORTHO05D002075 1.6e-21 106.7 195 41.5
Aa31LG5G5900 Aethionema arabicum HOM05D002063 ORTHO05D002075 6.0e-21 104.8 184 39.7
BraA05t20394Z Brassica rapa HOM05D002063 ORTHO05D002075 5.3e-17 91.7 117 47.9
A05p14640 Brassica napus HOM05D002063 ORTHO05D002075 2.0e-16 89.7 117 47.0
CARHR124530 Cardamine hirsuta HOM05D002063 ORTHO05D002075 2.6e-16 89.4 168 40.5
THA.LOC104815844 Tarenaya hassleriana HOM05D002063 ORTHO05D002075 2.9e-15 85.9 176 35.8
Rhsim06G0130600 Rhododendron simsii HOM05D002063 ORTHO05D002075 4.8e-10 68.6 164 32.3
Lalb_Chr14g0367531 Lupinus albus HOM05D002063 ORTHO05D002075 6.2e-10 68.2 166 31.9
Prupe.3G117500 Prunus persica HOM05D002063 ORTHO05D002075 1.4e-09 67.0 193 31.1
GSVIVG01020715001 Vitis vinifera HOM05D002063 ORTHO05D002075 1.4e-09 67.0 149 35.6
MELO3C013577.2 Cucumis melo HOM05D002063 ORTHO05D002075 9.0e-09 64.3 169 30.8
TWI59G1423 Tripterygium wilfordii HOM05D002063 ORTHO05D002075 9.0e-09 64.3 195 30.3
Dinv07711 Davidia involucrata HOM05D002063 ORTHO05D002075 1.2e-08 63.9 197 31.0
Sed0008738 Sechium edule HOM05D002063 ORTHO05D002075 1.2e-08 63.9 177 29.4
Gohir.A12G091500 Gossypium hirsutum HOM05D002063 ORTHO05D002075 1.5e-08 63.5 203 30.0
Duzib147G0122 Durio zibethinus HOM05D002063 ORTHO05D002075 2.0e-08 63.2 204 28.9
Actinidia11158 Actinidia chinensis HOM05D002063 ORTHO05D002075 2.6e-08 62.8 200 30.5
CiPaw.03G194900 Carya illinoinensis HOM05D002063 ORTHO05D002075 2.6e-08 62.8 183 31.7
ClCG02G017850 Citrullus lanatus HOM05D002063 ORTHO05D002075 2.6e-08 62.8 185 29.2
CSS0017486 Camellia sinensis var. sinensis HOM05D002063 ORTHO05D002075 3.4e-08 62.4 195 30.8
Medtr2g093020 Medicago truncatula HOM05D002063 ORTHO05D002075 3.4e-08 62.4 162 30.2
CiPaw.04G133300 Carya illinoinensis HOM05D002063 ORTHO05D002075 4.5e-08 62.0 185 30.8
Atru.chr6.2783 Acer truncatum HOM05D002063 ORTHO05D002075 7.6e-08 61.2 206 29.6
Atru.chr6.2786 Acer truncatum HOM05D002063 ORTHO05D002075 7.6e-08 61.2 195 29.2
Gohir.D12G091600 Gossypium hirsutum HOM05D002063 ORTHO05D002075 7.6e-08 61.2 203 30.0
QL08p041891 Quercus lobata HOM05D002063 ORTHO05D002075 7.6e-08 61.2 196 28.1
Haze_13399 Corylus avellana HOM05D002063 ORTHO05D002075 9.9e-08 60.8 199 31.2
Gorai.008G099200 Gossypium raimondii HOM05D002063 ORTHO05D002075 9.9e-08 60.8 198 28.8
Cfa023598 Carpinus fangiana HOM05D002063 ORTHO05D002075 1.3e-07 60.5 207 28.5
Thecc.01G151300 Theobroma cacao HOM05D002063 ORTHO05D002075 1.7e-07 60.1 200 27.5
Glyma.12G128800 Glycine max HOM05D002063 ORTHO05D002075 2.2e-07 59.7 181 28.2
THA.LOC104800840 Tarenaya hassleriana HOM05D002063 ORTHO05D002075 2.2e-07 59.7 167 31.1
Potri.014G142800 Populus trichocarpa HOM05D002063 ORTHO05D002075 2.9e-07 59.3 191 30.4
MD09G1236600 Malus domestica HOM05D002063 ORTHO05D002075 8.4e-07 57.8 187 29.4
Nn1g04435 Nelumbo nucifera HOM05D002063 ORTHO05D002075 8.4e-07 57.8 195 28.7
Sabra14G0107900 Salix brachista HOM05D002063 ORTHO05D002075 8.4e-07 57.8 47 57.4
FvH4_6g27510 Fragaria vesca HOM05D002063 ORTHO05D002075 1.1e-06 57.4 182 30.8
COL.COLO4_33589 Corchorus olitorius HOM05D002063 ORTHO05D002075 1.9e-06 56.6 208 28.4
Hma1.2p1_0178F.1_g078740 Hydrangea macrophylla HOM05D002063 ORTHO05D002075 1.9e-06 56.6 195 27.7
Cpa.g.sc52.165 Carica papaya HOM05D002063 ORTHO05D002075 3.2e-06 55.8 42 61.9
CsaV3_6G015180 Cucumis sativus L. HOM05D002063 ORTHO05D002075 5.5e-06 55.1 185 29.2
PGSC0003DMG400020440 Solanum tuberosum HOM05D002063 ORTHO05D002075 7.1e-06 54.7 206 29.1
MELO3C018721.2 Cucumis melo HOM05D002063 ORTHO05D002075 9.3e-06 54.3 166 30.1
Lj3g0021532 Lotus japonicus HOM05D002063 ORTHO05D002075 9.3e-06 54.3 204 26.0


User provided reference genes

Program Settings