Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 3.5e-228 794.7 409 100.0
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 3.5e-228 794.7 409 100.0
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 1.2e-201 706.4 380 95.5
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 1.7e-89 334.0 262 70.2
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.9e-72 277.3 294 58.8
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 1.2e-71 274.6 294 58.2
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 1.2e-71 274.6 294 58.2
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 9.5e-69 265.0 295 56.6
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 9.5e-69 265.0 295 56.6
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 9.5e-69 265.0 295 56.6
BcaC01g05426 Brassica carinata HOM05D008960 ORTHO05D021862 4.4e-58 229.6 380 45.8
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 1.7e-57 227.6 234 59.0
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 4.9e-57 226.1 234 58.5
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 8.4e-57 225.3 234 58.5
BcaC01g06122 Brassica carinata HOM05D008960 ORTHO05D021862 2.4e-56 223.8 380 44.7
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 1.2e-55 221.5 234 58.1
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 6.0e-55 219.2 234 57.7
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 5.1e-54 216.1 234 57.3
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 3.6e-52 209.9 220 57.7
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 1.4e-48 198.0 206 58.3
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 4.2e-48 196.4 396 40.9
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 6.4e-41 172.6 192 58.3
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 2.5e-32 144.1 172 54.7
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 8.7e-30 135.6 222 47.7
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 8.7e-30 135.6 222 47.7
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 1.1e-29 135.2 164 55.5
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 3.7e-28 130.2 219 45.7
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 6.2e-28 129.4 218 46.3
A06p35440 Brassica napus HOM05D009661 ORTHO05D018783 2.6e-26 124.0 235 44.3
BraA06t26467Z Brassica rapa HOM05D009661 ORTHO05D018783 2.6e-26 124.0 235 44.3
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 1.4e-24 118.2 181 48.6
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 3.2e-24 117.1 173 50.3
C06p07090 Brassica napus HOM05D009661 ORTHO05D020160 7.9e-23 112.5 191 46.1
C07p18550 Brassica napus HOM05D008960 ORTHO05D103607 1.3e-22 111.7 235 40.0
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 2.3e-22 110.9 172 48.3
C01p02030 Brassica napus HOM05D009661 ORTHO05D020160 5.9e-18 96.3 108 52.8
BraA07t31746Z Brassica rapa HOM05D008960 ORTHO05D108237 2.9e-17 94.0 56 80.4
BcaC01g00787 Brassica carinata HOM05D008960 ORTHO05D094263 1.2e-15 88.6 88 64.8
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 7.9e-15 85.9 133 48.9
BolC6t37706H Brassica oleracea HOM05D009661 ORTHO05D020160 1.5e-13 81.6 128 43.8
BolC6t38926H Brassica oleracea HOM05D009661 ORTHO05D018783 3.3e-13 80.5 129 43.4
C08p15900 Brassica napus HOM05D021780 ORTHO05D021716 9.7e-13 79.0 68 70.6
BolC8t49214H Brassica oleracea HOM05D021780 ORTHO05D021716 9.7e-13 79.0 68 70.6
C06p38270 Brassica napus HOM05D009661 ORTHO05D018783 2.2e-12 77.8 126 42.9
BolC6t35800H Brassica oleracea HOM05D009661 ORTHO05D020160 8.2e-12 75.9 128 43.0
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 1.8e-11 74.7 145 42.8
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 3.1e-11 73.9 172 43.0
A07p16610 Brassica napus HOM05D009661 ORTHO05D018783 4.1e-11 73.6 141 41.1
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 6.9e-11 72.8 174 39.1
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 6.9e-11 72.8 174 40.2
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 2.6e-10 70.9 174 39.7
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 2.6e-10 70.9 415 27.5
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 2.6e-10 70.9 145 42.1
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 4.5e-10 70.1 84 50.0
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 7.7e-10 69.3 84 50.0
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 1.3e-09 68.6 84 48.8
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 1.7e-09 68.2 206 36.9
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.1e-08 65.5 84 47.6
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 3.2e-08 63.9 59 59.3
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 2.1e-07 61.2 110 45.5
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 8.8e-06 55.8 91 44.0


User provided reference genes

Program Settings