Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 3.8e-140 501.5 260 100.0
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 2.5e-139 498.8 260 99.6
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 6.0e-125 451.1 234 99.6
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 1.2e-122 443.4 270 89.6
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 1.3e-119 433.3 264 89.8
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 2.6e-112 409.1 276 82.6
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 5.4e-102 374.8 275 77.1
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 7.1e-102 374.4 273 78.4
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 7.8e-101 370.9 276 76.8
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 3.1e-97 359.0 277 74.4
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 1.5e-96 356.7 276 74.6
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 5.8e-96 354.8 276 74.6
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 1.1e-94 350.5 275 73.1
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 5.4e-94 348.2 270 76.3
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 5.4e-94 348.2 270 76.3
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 5.4e-94 348.2 270 76.3
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 4.6e-93 345.1 269 74.7
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 6.7e-92 341.3 269 74.3
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 6.2e-90 334.7 267 69.3
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 1.5e-83 313.5 272 65.1
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 2.5e-70 269.6 272 57.0
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 3.2e-70 269.2 271 55.0
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 2.7e-69 266.2 275 55.3
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 1.3e-68 263.8 271 55.7
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 3.0e-68 262.7 272 54.8
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 8.7e-68 261.2 272 54.4
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.9e-67 260.0 272 54.4
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 2.5e-67 259.6 270 54.1
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 2.8e-66 256.1 287 53.3
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 3.7e-66 255.8 283 52.7
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 6.3e-66 255.0 273 54.6
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 8.2e-66 254.6 286 53.1
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 3.1e-65 252.7 286 53.5
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 3.1e-65 252.7 277 53.1
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 5.3e-65 251.9 282 52.1
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 7.7e-64 248.1 278 52.5
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 1.7e-63 246.9 270 51.5
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.2e-63 246.5 284 52.8
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.5e-63 245.0 288 52.4
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.5e-63 245.0 288 52.4
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 2.5e-62 243.0 285 49.5
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 5.5e-62 241.9 273 51.3
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 7.2e-62 241.5 269 52.0
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.2e-61 240.7 271 53.1
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 1.2e-61 240.7 272 50.7
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.6e-61 240.4 292 49.7
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 3.6e-61 239.2 280 51.1
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 4.6e-61 238.8 280 51.1
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 6.1e-61 238.4 286 50.3
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 7.9e-61 238.0 270 52.6
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 1.4e-60 237.3 292 49.3
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 1.4e-60 237.3 283 50.5
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 1.8e-60 236.9 282 51.1
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 2.3e-60 236.5 280 49.3
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 2.3e-60 236.5 276 51.8
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 5.1e-60 235.3 284 52.1
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 8.8e-60 234.6 289 49.1
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 8.8e-60 234.6 291 50.2
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 8.8e-60 234.6 280 48.9
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 2.0e-59 233.4 274 48.5
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 2.0e-59 233.4 272 48.9
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.6e-59 233.0 283 50.9
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 2.6e-59 233.0 279 48.7
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 3.3e-59 232.6 283 48.4
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 4.4e-59 232.3 282 47.9
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 4.4e-59 232.3 285 48.1
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 5.7e-59 231.9 274 51.1
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 7.4e-59 231.5 273 47.6
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 9.7e-59 231.1 319 46.1
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.3e-58 230.7 294 48.6
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 2.8e-58 229.6 351 43.0
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 3.7e-58 229.2 275 50.2
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 3.7e-58 229.2 267 50.9
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 6.3e-58 228.4 273 50.5
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 8.2e-58 228.0 304 47.4
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 8.2e-58 228.0 275 51.3
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.1e-57 227.6 278 50.7
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 1.1e-57 227.6 277 50.5
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 4.1e-57 225.7 228 53.9
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 6.9e-57 224.9 276 49.6
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 6.9e-57 224.9 273 50.2
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 9.1e-57 224.6 284 49.3
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.0e-56 223.4 264 50.4
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 2.6e-56 223.0 323 45.2
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 2.6e-56 223.0 275 49.8
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 4.5e-56 222.2 278 49.3
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 1.3e-55 220.7 275 49.1
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 6.5e-55 218.4 264 49.6
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 2.5e-54 216.5 298 46.0
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 2.5e-54 216.5 283 48.8
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 4.2e-54 215.7 325 43.1
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 5.5e-54 215.3 272 47.4
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 5.5e-54 215.3 279 47.7
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 9.4e-54 214.5 287 46.3
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 1.6e-53 213.8 276 49.6
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 2.7e-53 213.0 289 46.4
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 2.7e-53 213.0 275 47.3
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 6.1e-53 211.8 277 49.1
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 1.4e-52 210.7 269 49.1
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 6.7e-52 208.4 279 49.5
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 3.3e-51 206.1 284 43.7
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 7.4e-51 204.9 276 47.1
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 1.7e-50 203.8 266 44.0
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 2.2e-50 203.4 282 45.7
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 4.8e-50 202.2 269 46.5
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 1.1e-49 201.1 286 42.3
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 9.1e-49 198.0 266 44.0
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 1.2e-48 197.6 241 49.0
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 7.7e-48 194.9 276 43.1
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.2e-47 193.4 276 45.3
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 3.2e-46 189.5 186 58.6
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 7.2e-46 188.3 266 44.0
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.1e-45 186.8 277 43.0
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 1.4e-44 184.1 281 42.7
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 1.3e-42 177.6 148 68.9
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 4.1e-41 172.6 176 51.7
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 5.3e-41 172.2 236 45.3
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 5.0e-39 165.6 276 42.8
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 2.7e-37 159.8 264 42.8
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 6.1e-37 158.7 471 31.0
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 3.0e-36 156.4 219 43.4
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 8.8e-36 154.8 274 38.0
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 1.7e-34 150.6 280 39.3
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 1.1e-33 147.9 208 45.7
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 1.1e-33 147.9 138 62.3
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 2.4e-33 146.7 502 29.1
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 1.2e-32 144.4 143 57.3
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 2.0e-32 143.7 166 47.6
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 3.5e-32 142.9 280 38.6
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.2e-29 134.4 116 64.7
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 1.6e-29 134.0 213 41.8
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 2.0e-27 127.1 175 41.7
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 9.8e-27 124.8 257 36.6
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 1.7e-26 124.0 175 41.7
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 4.9e-26 122.5 175 40.6
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 1.8e-25 120.6 263 33.1
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 2.9e-23 113.2 92 63.0
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 7.5e-19 98.6 107 57.0
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 2.9e-18 96.7 234 33.3
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 4.9e-18 95.9 102 54.9
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 8.3e-18 95.1 174 40.2
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 4.1e-17 92.8 265 30.2
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 3.9e-15 86.3 160 37.5
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.0e-11 73.9 145 36.6
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.5e-11 72.0 144 34.7
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.4e-09 67.8 159 35.8
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 5.4e-09 65.9 149 34.9
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 7.0e-09 65.5 199 32.2
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.0e-09 65.5 145 32.4
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 9.2e-09 65.1 161 34.8
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 4.6e-08 62.8 90 45.6
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.7e-07 60.8 140 32.9
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 2.3e-07 60.5 149 32.9
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 3.0e-07 60.1 142 31.7
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.9e-07 59.7 142 33.8
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 5.0e-07 59.3 75 38.7
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.1e-06 58.2 167 28.7
SEGI_25677 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 9.5e-06 55.1 69 40.6


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