Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 6.6e-44 180.3 87 100.0
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 2.8e-42 174.9 87 97.7
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 8.0e-42 173.3 87 95.4
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 7.5e-40 166.8 87 92.0
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 9.8e-40 166.4 87 92.0
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 9.8e-40 166.4 87 92.0
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 1.3e-39 166.0 87 89.7
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 3.7e-39 164.5 87 90.8
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 2.4e-38 161.8 87 90.8
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 4.1e-38 161.0 87 89.7
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 8.1e-26 120.2 80 73.8
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 1.9e-22 109.0 74 71.6
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 7.8e-21 103.6 74 64.9
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 7.8e-21 103.6 72 68.1
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 1.0e-20 103.2 74 67.6
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 1.7e-20 102.4 72 68.1
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 3.0e-20 101.7 76 63.2
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 6.6e-20 100.5 73 64.4
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 6.6e-20 100.5 75 64.0
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 6.6e-20 100.5 67 71.6
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 1.5e-19 99.4 76 60.5
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 1.9e-19 99.0 73 63.0
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 1.9e-19 99.0 74 63.5
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 7.3e-19 97.1 87 56.3
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 1.2e-18 96.3 80 56.2
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 1.2e-18 96.3 73 60.3
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 1.6e-18 95.9 79 57.0
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.6e-18 95.9 72 62.5
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 1.6e-18 95.9 75 60.0
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 2.1e-18 95.5 74 63.5
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 6.2e-18 94.0 73 61.6
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 8.1e-18 93.6 73 63.0
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 8.1e-18 93.6 80 56.2
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.8e-17 92.4 65 64.6
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 3.1e-17 91.7 75 61.3
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 5.2e-17 90.9 74 59.5
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 5.2e-17 90.9 73 60.3
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 5.2e-17 90.9 87 48.3
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 6.8e-17 90.5 75 57.3
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 8.9e-17 90.1 80 57.5
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 8.9e-17 90.1 87 50.6
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.2e-16 89.7 72 59.7
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 1.2e-16 89.7 87 48.3
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 1.2e-16 89.7 80 60.0
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 1.5e-16 89.4 81 61.7
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 3.4e-16 88.2 83 54.2
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 3.4e-16 88.2 74 58.1
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 3.4e-16 88.2 73 56.2
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 5.8e-16 87.4 85 50.6
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 7.6e-16 87.0 79 53.2
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 7.6e-16 87.0 73 57.5
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 7.6e-16 87.0 80 52.5
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 9.9e-16 86.7 87 47.1
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 2.2e-15 85.5 83 51.8
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 2.2e-15 85.5 72 55.6
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 2.9e-15 85.1 75 56.0
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 2.9e-15 85.1 73 58.9
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 2.9e-15 85.1 72 55.6
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 2.9e-15 85.1 72 55.6
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 3.8e-15 84.7 88 51.1
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 4.9e-15 84.3 71 54.9
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.4e-14 82.8 53 71.7
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.4e-14 82.8 53 71.7
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 2.4e-14 82.0 72 55.6
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 5.4e-14 80.9 73 53.4
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 5.4e-14 80.9 73 53.4
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 7.1e-14 80.5 92 47.8
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 1.2e-13 79.7 78 50.0
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.6e-13 79.3 73 56.2
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 3.5e-13 78.2 72 50.0
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 4.6e-13 77.8 72 50.0
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 6.0e-13 77.4 72 52.8
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 7.3e-11 70.5 72 48.6
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 9.6e-11 70.1 67 49.3
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 8.1e-10 67.0 75 45.3
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 8.1e-10 67.0 60 50.0
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 5.3e-09 64.3 57 47.4
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 9.0e-09 63.5 59 52.5
Aa31LG3G11430 Aethionema arabicum HOM05D007721 ORTHO05D009811 4.4e-08 61.2 57 56.1


User provided reference genes

Program Settings