Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 9.7e-83 310.1 153 100.0
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 9.7e-83 310.1 153 100.0
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 2.2e-82 308.9 153 99.3
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 1.1e-78 296.6 153 94.8
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 2.7e-77 292.0 153 92.8
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 6.1e-77 290.8 153 92.2
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 1.0e-76 290.0 153 92.8
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 2.2e-74 282.3 152 92.8
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 1.4e-73 279.6 152 90.1
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 3.1e-73 278.5 152 88.2
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 2.0e-72 275.8 153 88.2
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 3.4e-72 275.0 153 87.6
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 6.1e-69 264.2 151 85.4
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 2.0e-64 249.2 148 82.4
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 3.3e-59 231.9 142 79.6
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 2.8e-42 175.6 146 63.7
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 2.4e-41 172.6 144 59.7
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 2.4e-41 172.6 154 59.7
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 4.1e-41 171.8 137 63.5
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 7.0e-41 171.0 147 62.6
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 2.7e-40 169.1 137 62.8
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 3.5e-40 168.7 146 61.0
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 4.5e-40 168.3 150 60.7
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 4.5e-40 168.3 127 64.6
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 7.7e-40 167.5 158 57.0
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 1.7e-39 166.4 148 58.8
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 3.8e-39 165.2 125 66.4
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 5.0e-39 164.9 153 58.8
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 5.0e-39 164.9 148 60.1
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 6.6e-39 164.5 155 54.8
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 8.6e-39 164.1 146 58.9
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 8.6e-39 164.1 145 60.0
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 1.1e-38 163.7 125 63.2
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 1.1e-38 163.7 160 55.0
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 1.1e-38 163.7 153 56.2
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 3.3e-38 162.2 154 57.1
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 4.3e-38 161.8 160 55.0
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 5.6e-38 161.4 146 54.8
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 5.6e-38 161.4 144 56.2
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 9.5e-38 160.6 135 57.8
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 9.5e-38 160.6 146 55.5
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 2.1e-37 159.5 123 65.9
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 2.8e-37 159.1 148 54.7
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 3.6e-37 158.7 137 58.4
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 4.7e-37 158.3 123 62.6
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 4.7e-37 158.3 152 54.6
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 4.7e-37 158.3 146 58.9
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 4.7e-37 158.3 145 59.3
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 8.0e-37 157.5 151 55.0
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 8.0e-37 157.5 151 55.0
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 1.4e-36 156.8 149 56.4
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 2.3e-36 156.0 125 60.8
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 3.0e-36 155.6 129 57.4
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 4.0e-36 155.2 153 52.3
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 5.2e-36 154.8 147 55.1
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 5.2e-36 154.8 123 61.8
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 5.2e-36 154.8 123 61.8
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 5.2e-36 154.8 148 51.4
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 5.2e-36 154.8 143 54.5
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 5.2e-36 154.8 123 62.6
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 6.8e-36 154.5 128 59.4
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 8.9e-36 154.1 152 53.9
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.2e-35 153.7 141 56.7
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.2e-35 153.7 128 60.2
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 1.2e-35 153.7 153 53.6
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 1.5e-35 153.3 141 55.3
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 2.6e-35 152.5 146 56.2
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 3.4e-35 152.1 146 55.5
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 3.4e-35 152.1 152 55.9
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 5.7e-35 151.4 148 55.4
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 5.7e-35 151.4 148 55.4
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 7.5e-35 151.0 152 55.3
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 2.2e-34 149.4 152 55.3
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 2.9e-34 149.1 154 53.9
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 3.7e-34 148.7 128 58.6
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 3.7e-34 148.7 123 61.8
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 4.9e-34 148.3 125 56.0
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 8.3e-34 147.5 121 57.9
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 1.4e-33 146.7 151 53.6
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 1.4e-33 146.7 141 54.6
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 3.2e-33 145.6 144 51.4
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 5.4e-33 144.8 122 60.7
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 3.5e-32 142.1 146 50.7
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 4.6e-32 141.7 124 57.3
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 7.8e-32 141.0 147 51.0
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 1.5e-30 136.7 145 50.3
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 1.9e-30 136.3 126 54.8
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 3.3e-30 135.6 108 62.0
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 2.8e-29 132.5 152 49.3
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 6.2e-29 131.3 67 95.5
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 1.0e-28 130.6 143 47.6
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 6.8e-28 127.9 128 50.8
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 3.4e-27 125.6 130 50.8
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 7.5e-27 124.4 158 46.2
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 9.8e-27 124.0 124 53.2
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 1.3e-26 123.6 94 64.9
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 3.7e-26 122.1 123 48.0
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 4.6e-24 115.2 86 66.3
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 5.2e-20 101.7 161 37.9
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 3.7e-18 95.5 98 52.0
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 6.4e-18 94.7 81 60.5
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 2.1e-16 89.7 115 40.0
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 5.2e-12 75.1 112 37.5
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 2.0e-11 73.2 108 41.7
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 7.1e-09 64.7 116 33.6
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 1.2e-08 63.9 104 37.5
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 2.7e-08 62.8 62 53.2
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 3.5e-08 62.4 78 44.9
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 6.0e-08 61.6 62 53.2
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 5.1e-07 58.5 111 31.5
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 1.5e-06 57.0 112 32.1
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.9e-06 56.6 107 32.7
ATR0414G002 Amborella trichopoda HOM05D007363 ORTHO05D009018 3.3e-06 55.8 142 31.0


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