Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p15730 Brassica napus HOM05D000051 ORTHO05D000015 6.3e-26 119.8 52 100.0
BcaC01g06424 Brassica carinata HOM05D000051 ORTHO05D000015 1.5e-22 108.6 52 92.3
BolC3t14007H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-20 102.1 55 83.6
Thhalv10015668m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-15 84.3 52 69.2
BraA03t10604Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-14 81.3 52 61.5
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-13 79.0 54 63.0
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 1.2e-13 79.0 54 63.0
CARHR269880 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-13 78.6 52 59.6
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-13 78.2 54 63.0
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-13 78.2 54 63.0
CARHR033430 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.1e-13 76.6 52 61.5
Thhalv10013717m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.0e-13 76.3 52 65.4
BolC3t14016H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-12 75.5 58 60.3
AT5G56380 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.3e-12 74.7 52 59.6
C03p15840 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-12 74.7 58 62.1
BolC3t14015H Brassica oleracea HOM05D000051 ORTHO05D000015 2.3e-12 74.7 58 62.1
Sp6g18220 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.2e-12 73.6 54 61.1
BcaC01g06417 Brassica carinata HOM05D000051 ORTHO05D000015 6.8e-12 73.2 58 58.6
C03p15830 Brassica napus HOM05D000051 ORTHO05D000038 6.8e-12 73.2 58 58.6
A03p18600 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-11 72.0 36 80.6
Thhalv10013624m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.5e-11 72.0 52 55.8
Thhalv10028200m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.5e-11 72.0 54 59.3
AT1G32375 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.0e-11 71.6 54 61.1
BolC3t14013H Brassica oleracea HOM05D000082 ORTHO05D000038 2.0e-11 71.6 58 58.6
BraA02t05981Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-11 71.6 53 62.3
BraA03t10652Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-11 71.6 35 82.9
Thhalv10015489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.0e-11 71.6 54 61.1
A03p13540 Brassica napus HOM05D000051 ORTHO05D000038 2.6e-11 71.2 58 58.6
A03p13550 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-11 71.2 58 60.3
BraA03t10660Z Brassica rapa HOM05D000051 ORTHO05D000015 2.6e-11 71.2 58 60.3
AL8G32110 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.4e-11 70.9 54 57.4
CARHR269740 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.4e-11 70.5 54 61.1
Thhalv10015962m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.4e-11 70.5 58 58.6
BraA03t10659Z Brassica rapa HOM05D000051 ORTHO05D000038 5.7e-11 70.1 58 56.9
CARHR031770 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.7e-11 70.1 54 61.1
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 7.5e-11 69.7 54 57.4
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 7.5e-11 69.7 54 57.4
AL8G32100 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.8e-11 69.3 52 53.8
A02p09150 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-10 68.6 53 58.5
A03p13460 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-10 67.4 54 55.6
AT5G56390 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.8e-10 67.0 54 55.6
C02p15290 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-10 67.0 53 58.5
BolC2t07646H Brassica oleracea HOM05D000051 ORTHO05D000015 4.8e-10 67.0 53 58.5
BraA04t16288Z Brassica rapa HOM05D000051 ORTHO05D000015 4.8e-10 67.0 58 55.2
Carub.0008s1682 Capsella rubella HOM05D000051 ORTHO05D000015 4.8e-10 67.0 53 58.5
BcaNung05128 Brassica carinata HOM05D000051 ORTHO05D000015 6.3e-10 66.6 52 53.8
AL8G31960 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.3e-10 66.2 54 59.3
BcaB06g27237 Brassica carinata HOM05D000051 ORTHO05D000015 8.3e-10 66.2 52 57.7
Carub.0008s1678 Capsella rubella HOM05D000051 ORTHO05D000015 8.3e-10 66.2 52 48.1
CARHR269930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.3e-10 66.2 54 59.3
C04p45280 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-09 65.9 52 57.7
BolC4t26111H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-09 65.9 52 57.7
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-09 65.9 54 53.7
A04p11540 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-09 65.5 52 57.7
BolC9t57621H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-09 65.5 53 56.6
BraA04t16819Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-09 65.5 52 57.7
Sp6g18210 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.4e-09 65.5 52 55.8
BolC2t07647H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-09 65.1 52 53.8
BraA02t05982Z Brassica rapa HOM05D000051 ORTHO05D000015 1.8e-09 65.1 52 53.8
CARHR031780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-09 65.1 52 55.8
CARHR269730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-09 65.1 52 57.7
Thhalv10015540m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-09 65.1 52 57.7
Thhalv10015747m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.4e-09 64.7 53 60.4
AT5G56325 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-09 64.3 54 50.0
Thhalv10013763m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.1e-09 62.8 54 53.7
BraA03t10654Z Brassica rapa HOM05D000051 ORTHO05D000015 1.6e-08 62.0 53 50.9
BcaB01g02570 Brassica carinata HOM05D000051 ORTHO05D000015 2.7e-08 61.2 54 53.7
C09p47830 Brassica napus HOM05D000051 ORTHO05D000015 3.5e-08 60.8 52 55.8
Thhalv10015353m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.5e-08 60.8 55 49.1
Thhalv10029438m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.5e-08 60.5 53 50.9
Aa31LG3G3830 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.9e-08 60.1 53 47.2
AL8G31970 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.9e-08 60.1 54 46.3
AL8G32120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.9e-08 60.1 54 53.7
Carub.0008s1667 Capsella rubella HOM05D000051 ORTHO05D000015 5.9e-08 60.1 52 48.1
CARHR277260 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.0e-07 59.3 52 48.1
Carub.0007s2887 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-07 58.5 51 52.9
Carub.0008s1680 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-07 58.5 42 59.5
Thhalv10015273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-07 58.5 52 51.9
Sp6g18540 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.7e-07 58.5 48 56.2
BcaB05g22266 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-07 58.2 50 50.0
Carub.0008s1666 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-07 58.2 52 50.0
Carub.0008s1684 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-07 57.4 54 53.7
CARHR129080 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.8e-07 57.4 68 41.2
Aa31LG3G12300 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.0e-07 57.0 52 48.1
C02p15270 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-07 57.0 50 48.0
BolC2t07644H Brassica oleracea HOM05D000051 ORTHO05D000015 5.0e-07 57.0 50 48.0
Thhalv10015986m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.0e-07 57.0 53 50.9
C03p15580 Brassica napus HOM05D000051 ORTHO05D000015 6.5e-07 56.6 52 46.2
A03p13020 Brassica napus HOM05D000051 ORTHO05D000015 8.5e-07 56.2 52 46.2
A09p51050 Brassica napus HOM05D000051 ORTHO05D000015 8.5e-07 56.2 55 49.1
BraA09t40551Z Brassica rapa HOM05D000051 ORTHO05D000015 8.5e-07 56.2 55 49.1
AL7G42890 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-06 55.8 53 50.9
C07p40860 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 55.8 56 48.2
BolC7t44611H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-06 55.8 56 48.2
A02p09000 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 55.5 52 48.1
A02p09120 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 55.5 50 48.0
C08p35960 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 55.5 54 46.3
BolC8t51179H Brassica oleracea HOM05D000051 ORTHO05D000015 1.5e-06 55.5 54 46.3
Carub.0001s3860 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-06 55.5 52 50.0
THA.LOC104811717 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.5e-06 55.5 54 51.9
Aa31LG3G12320 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.9e-06 55.1 52 48.1
AT5G56810 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.9e-06 55.1 55 49.1
CARHR269910 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.9e-06 55.1 50 48.0
Aa31LG3G5160 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.5e-06 54.7 53 43.4
BcaC02g07791 Brassica carinata HOM05D000051 ORTHO05D000015 2.5e-06 54.7 54 40.7
BolC4t27826H Brassica oleracea HOM05D000051 ORTHO05D000015 2.5e-06 54.7 54 40.7
Thhalv10015283m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.5e-06 54.7 52 51.9
BraA02t05979Z Brassica rapa HOM05D000051 ORTHO05D000015 3.2e-06 54.3 50 46.0
Thhalv10015709m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.2e-06 54.3 53 52.8
Thhalv10015809m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.2e-06 54.3 52 46.2
AL7G26600 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.2e-06 53.9 54 50.0
AT5G62970 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.2e-06 53.9 54 46.3
BcaB08g35092 Brassica carinata HOM05D000051 ORTHO05D000015 4.2e-06 53.9 52 48.1
C03p89730 Brassica napus HOM05D000051 ORTHO05D042032 4.2e-06 53.9 55 58.2
BolC3t13961H Brassica oleracea HOM05D000051 ORTHO05D000015 4.2e-06 53.9 52 42.3
BolC3t21295H Brassica oleracea HOM05D000051 ORTHO05D042032 4.2e-06 53.9 55 58.2
CARHR269890 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.2e-06 53.9 53 47.2
AL7G51940 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.5e-06 53.5 56 51.8
BcaC09g50692 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-06 53.5 53 49.1
A04p26180 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-06 53.5 54 40.7
C01p22190 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-06 53.5 53 49.1
C02p15220 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-06 53.5 66 42.4
BolC1t02149H Brassica oleracea HOM05D000051 ORTHO05D000015 5.5e-06 53.5 53 49.1
CARHR121120 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.5e-06 53.5 54 50.0
Thhalv10011126m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.5e-06 53.5 54 48.1
Aa31LG3G3750 Aethionema arabicum HOM05D000051 ORTHO05D000015 7.2e-06 53.1 52 46.2
BcaB05g22294 Brassica carinata HOM05D000051 ORTHO05D000015 7.2e-06 53.1 52 50.0
Carub.0003s1100 Capsella rubella HOM05D000051 ORTHO05D000015 7.2e-06 53.1 57 43.9
Carub.0008s1728 Capsella rubella HOM05D000051 ORTHO05D000015 7.2e-06 53.1 55 49.1
Thhalv10027789m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.2e-06 53.1 54 50.0
AT5G56440 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.5e-06 52.8 65 38.5
BcaC02g09658 Brassica carinata HOM05D000051 ORTHO05D000015 9.5e-06 52.8 51 49.0
C04p45230 Brassica napus HOM05D000051 ORTHO05D000015 9.5e-06 52.8 51 49.0
C04p63560 Brassica napus HOM05D000051 ORTHO05D000015 9.5e-06 52.8 54 40.7
BolC4t26105H Brassica oleracea HOM05D000051 ORTHO05D000015 9.5e-06 52.8 51 49.0
BraA04t18121Z Brassica rapa HOM05D000051 ORTHO05D000015 9.5e-06 52.8 54 40.7
Thhalv10015652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.5e-06 52.8 36 58.3
Sp6g18230 Schrenkiella parvula HOM05D000051 ORTHO05D000015 9.5e-06 52.8 53 50.9


User provided reference genes

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